Csa6G133800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G133800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionIron-sulfur clusters transporter atm1, mitochondrial; contains IPR011527 (ABC transporter, transmembrane domain, type 1)
LocationChr6 : 9274142 .. 9275566 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAGAAGAAGAAGAAGAAGGAATGTTGGCTGCCTGTAGGTGCCTCGGAGCCACGGAGCTTATTCAATCTAATGGTCGACATTTGGTGTCTTCCAAAGGCGGAGCCTCGTTCTTAATCTATTGCAATCGTAATTACAATCGTCTTTCAACCGGCGCGCTAGGGAGCATTTCCGACAGATATTCGATCTTAAGCAGCAACTTCCTTACGACACATGATGATCGTATTATGTACATTCAAGGCCGCAATTCTCGTAGTTTTAGTTCCTCTAGACCGAATTCCAATCCACTGAGTCGCGTCCATGCTTTCTTGTCTGATCCTTCTTCTTCCTCCTCGACCAAAGGATCTCAATCTGTTAGTTTTTCTTCTTGGGGTTATGTATTTTGATATTCAATCGCACTGTTCCTTGAAGTTGAGTGTTGATTTCTTTTCCATTTCCATGGTTATAAACAATTTAATGCAGGGTTTCATGTTAAATGGGCGGCTACCGTTCTCAACCTCTTCTGCCAATGGCACTGAAGCAGCATCGTCTCCCAGTGGAAAAAATATTAAACCTGTTAATAAAGGATCGGAGTCCCAAGTTGCCGATGCAAAGATTTTGCGTACTCTTGCTAGTTATTTATGGATGAAAGACAACTCCGAGTTCCGTTTCAGGGTCATAATGGCTTTGGGTTTCTTGGTCGGAGCTAAGGTCTGGTTATTTACAATCATCAAACACCTAGCTTTCCCATGTTTCTGTGCTCTTCTTTTGCATTTCATTTTTGTTTTTTTTTCCTTGTAGATTTTGAACGTTCAGGTGCCATTTCTCTTCAAGCTAGCCGTTGACTGGTTGACCACTGCTTCAGGGAATGCAGCTGCTCTTGCTTCTTTTACTGCCGCTAATTCCACCATGTTAACTCTTTTTTCAACACCAGCTGCGGTTTTAGTTGGTTATGGCATTGCCCGGTCTGGGGCATCTGCTTTCAACGGTACTAGACATGAAGTAATTGCTTATACTCGTTCTACGTTATCTGCATGCTTCTTCTATTTCATTGCTTAAAAATATTTTAGTGTCTTCTTTATGTTTTGCCAATTATTTTACACTGCTGTAATGCAATTCCTCTCATGCTTTTGCAGAGCTGCGGACTGCCGTTTTCTCCAAGGTAGCACTACGGACAATTCGATCTGTATCTCGAAAGGTATGTCTGGAAAAGTTCTGTTTTTGTTTTTCTGGTGCCGGAAGCCAAATTGTAGGGAGGTTTTTTAAACTTTCGAAATTCTAATTTAATGCTCTAACTATTGTTACTTCATTCTTTTTTAGATGGAGATTCTTTTTTTTTTGGAGTTTTAAATTCTAATTTAACATGATGCTTATGCTTGATTTGGTTATTGTTTGCAGGTTTTTTCACACTTGCATGACCTTGACCTCCAGTATCATCTTAGGTAA

mRNA sequence

ATGTTGGCTGCCTGTAGGTGCCTCGGAGCCACGGAGCTTATTCAATCTAATGGTCGACATTTGGTGTCTTCCAAAGGCGGAGCCTCGTTCTTAATCTATTGCAATCGTAATTACAATCGTCTTTCAACCGGCGCGCTAGGGAGCATTTCCGACAGATATTCGATCTTAAGCAGCAACTTCCTTACGACACATGATGATCGTATTATGTACATTCAAGGCCGCAATTCTCGTAGTTTTAGTTCCTCTAGACCGAATTCCAATCCACTGAGTCGCGTCCATGCTTTCTTGTCTGATCCTTCTTCTTCCTCCTCGACCAAAGGATCTCAATCTGGTTTCATGTTAAATGGGCGGCTACCGTTCTCAACCTCTTCTGCCAATGGCACTGAAGCAGCATCGTCTCCCAGTGGAAAAAATATTAAACCTGTTAATAAAGGATCGGAGTCCCAAGTTGCCGATGCAAAGATTTTGCGTACTCTTGCTAGTTATTTATGGATGAAAGACAACTCCGAGTTCCGTTTCAGGGTCATAATGGCTTTGGGTTTCTTGGTCGGAGCTAAGATTTTGAACGTTCAGGTGCCATTTCTCTTCAAGCTAGCCGTTGACTGGTTGACCACTGCTTCAGGGAATGCAGCTGCTCTTGCTTCTTTTACTGCCGCTAATTCCACCATGTTAACTCTTTTTTCAACACCAGCTGCGGTTTTAGTTGGTTATGGCATTGCCCGGTCTGGGGCATCTGCTTTCAACGAGCTGCGGACTGCCGTTTTCTCCAAGGTAGCACTACGGACAATTCGATCTGTATCTCGAAAGGTTTTTTCACACTTGCATGACCTTGACCTCCAGTATCATCTTAGGTAA

Coding sequence (CDS)

ATGTTGGCTGCCTGTAGGTGCCTCGGAGCCACGGAGCTTATTCAATCTAATGGTCGACATTTGGTGTCTTCCAAAGGCGGAGCCTCGTTCTTAATCTATTGCAATCGTAATTACAATCGTCTTTCAACCGGCGCGCTAGGGAGCATTTCCGACAGATATTCGATCTTAAGCAGCAACTTCCTTACGACACATGATGATCGTATTATGTACATTCAAGGCCGCAATTCTCGTAGTTTTAGTTCCTCTAGACCGAATTCCAATCCACTGAGTCGCGTCCATGCTTTCTTGTCTGATCCTTCTTCTTCCTCCTCGACCAAAGGATCTCAATCTGGTTTCATGTTAAATGGGCGGCTACCGTTCTCAACCTCTTCTGCCAATGGCACTGAAGCAGCATCGTCTCCCAGTGGAAAAAATATTAAACCTGTTAATAAAGGATCGGAGTCCCAAGTTGCCGATGCAAAGATTTTGCGTACTCTTGCTAGTTATTTATGGATGAAAGACAACTCCGAGTTCCGTTTCAGGGTCATAATGGCTTTGGGTTTCTTGGTCGGAGCTAAGATTTTGAACGTTCAGGTGCCATTTCTCTTCAAGCTAGCCGTTGACTGGTTGACCACTGCTTCAGGGAATGCAGCTGCTCTTGCTTCTTTTACTGCCGCTAATTCCACCATGTTAACTCTTTTTTCAACACCAGCTGCGGTTTTAGTTGGTTATGGCATTGCCCGGTCTGGGGCATCTGCTTTCAACGAGCTGCGGACTGCCGTTTTCTCCAAGGTAGCACTACGGACAATTCGATCTGTATCTCGAAAGGTTTTTTCACACTTGCATGACCTTGACCTCCAGTATCATCTTAGGTAA

Protein sequence

MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNFLTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR*
Homology
[Close]
BLAST of Csa6G133800 vs. Swiss-Prot
Match: AB25B_ARATH (ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABCB25 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-65
Identity = 135/197 (68.53%), Postives = 154/197 (78.17%), Query Frame = 1 

Query: 92  VHAFLSDPSSSSSTKGS-----QSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGS 151
           ++AFLSD S S S   S     Q   MLNGRL FSTS+ N  +  +    K IK  +  S
Sbjct: 58  INAFLSDNSPSPSPSPSPIRFVQRSSMLNGRL-FSTSTPNPDQTTTKT--KEIKTTSSDS 117

Query: 152 ESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTA 211
           +S +AD KILRTLA YLWM+DN EFRFRVI ALGFLVGAK+LNVQVPFLFKLAVDWL +A
Sbjct: 118 DSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLASA 177

Query: 212 SGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSV 271
           +G  A+L +F A N T+LT+F+TPAAVL+GYGIAR+G+SAFNELRTAVFSKVALRTIRSV
Sbjct: 178 TGTGASLTTFAATNPTLLTVFATPAAVLIGYGIARTGSSAFNELRTAVFSKVALRTIRSV 237

Query: 272 SRKVFSHLHDLDLQYHL 284
           SRKVFSHLHDLDL+YHL
Sbjct: 238 SRKVFSHLHDLDLRYHL 251

[Close]
BLAST of Csa6G133800 vs. Swiss-Prot
Match: AB23B_ARATH (ABC transporter B family member 23, mitochondrial OS=Arabidopsis thaliana GN=ABCB23 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.5e-46
Identity = 111/208 (53.37%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 78  SFSS--SRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEAASSPS 137
           SFSS   R +      ++AF +DPS S S   ++  F       FSTS+       S+P 
Sbjct: 26  SFSSFIKRSSIQRSPAINAFFTDPSPSPSPVNARVFF-------FSTST-------STP- 85

Query: 138 GKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFL 197
                  N+      +  KILRT++SYLWMKDN E RFRVI AL  L+GAK LNVQVPFL
Sbjct: 86  -------NQDQTKTASSKKILRTISSYLWMKDNPELRFRVIAALACLIGAKFLNVQVPFL 145

Query: 198 FKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVF 257
           FKL++D L++ S +     + T +N  +L  F+TP++VL+GYGIARSG+SAFNELRTAVF
Sbjct: 146 FKLSIDLLSSYSSS-----TITDSNPYLLAAFATPSSVLIGYGIARSGSSAFNELRTAVF 205

Query: 258 SKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           SKV+LRTIRSVSRKV SHLHDLDL+YHL
Sbjct: 206 SKVSLRTIRSVSRKVLSHLHDLDLRYHL 206

[Close]
BLAST of Csa6G133800 vs. Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-42
Identity = 96/187 (51.34%), Postives = 126/187 (67.38%), Query Frame = 1 

Query: 97  SDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGSESQVADAKIL 156
           S P+++S    S    M+N R+ F ++S       S+P  + I        ++ +   IL
Sbjct: 44  SPPTNASHQSPSPITPMVNARVMFFSTST------SAPHPEKI--------NRTSSENIL 103

Query: 157 RTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASF 216
           R ++SYLWMKDN +  FRVI A   LVGAK LNVQVPFLFK+A+DWL+++S        F
Sbjct: 104 RMISSYLWMKDNPKLCFRVISAFACLVGAKFLNVQVPFLFKVAIDWLSSSS--------F 163

Query: 217 TAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHD 276
             +N  ++  F+TP++VL+GYGIARSG+SAFNELRT+VFSKVALRTIR++SRKV S LHD
Sbjct: 164 VDSNPYLVAAFATPSSVLIGYGIARSGSSAFNELRTSVFSKVALRTIRTISRKVLSRLHD 208

Query: 277 LDLQYHL 284
           LDL+YHL
Sbjct: 224 LDLRYHL 208

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BLAST of Csa6G133800 vs. Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 1 

Query: 154 KILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAAL 213
           KI++ + SY+W KD  + R RV ++LGFL GAK +N+ VPF+FK AVD L   SGN   L
Sbjct: 119 KIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGNMLNL 178

Query: 214 ASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRKVFSH 273
           +      +TM T      AVL+GYG++R+GA+ FNE+R AVF KVA  +IR +++ VF H
Sbjct: 179 SDAPNTVATMAT------AVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLH 238

Query: 274 LHDLDLQYHL 284
           LH+LDL +HL
Sbjct: 239 LHNLDLGFHL 242

[Close]
BLAST of Csa6G133800 vs. Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 1 

Query: 154 KILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAAL 213
           KI++ + SY+W KD  + R RV ++LGFL GAK +N+ VPF+FK AVD L   SGN   L
Sbjct: 119 KIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGNMLNL 178

Query: 214 ASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRKVFSH 273
           +      +TM T      AVL+GYG++R+GA+ FNE+R AVF KVA  +IR +++ VF H
Sbjct: 179 SDAPNTVATMAT------AVLIGYGVSRAGAAFFNEVRNAVFGKVAQNSIRRIAKNVFLH 238

Query: 274 LHDLDLQYHL 284
           LH+LDL +HL
Sbjct: 239 LHNLDLGFHL 242

[Close]
BLAST of Csa6G133800 vs. TrEMBL
Match: A0A0A0KG84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G133800 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.6e-154
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60
           MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF
Sbjct: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60

Query: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120
           LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF
Sbjct: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120

Query: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180
           STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG
Sbjct: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180

Query: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240
           FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA
Sbjct: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240

Query: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR 285
           RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR
Sbjct: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR 284

[Close]
BLAST of Csa6G133800 vs. TrEMBL
Match: A9PJZ2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.3e-69
Identity = 159/278 (57.19%), Postives = 193/278 (69.42%), Query Frame = 1 

Query: 34  CNRNYNRLSTG----------ALGSISDRYSILSSNFLTTHDDRIMYIQGRNS------- 93
           C+R +N+L  G          +L   +  +SI + N    H++R     GR+S       
Sbjct: 10  CSRAHNKLLLGNHNIKNNPLLSLCFFNHSHSIHTPN----HNNRPRCFPGRSSGTAIFAN 69

Query: 94  ------RSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQS-GFMLNGRLPFSTSSA---- 153
                 RSF++   N      ++AFLS+P+SSSST   +    +LNG   FST SA    
Sbjct: 70  SPSISNRSFTTPSWNHRRYLNLNAFLSNPASSSSTPPFRPPNSVLNGHALFSTMSAPKDK 129

Query: 154 NGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGA 213
           +G    + PS       NK S+ QVAD KILRTLASYLWM+DN EFR RV++ALGFLVGA
Sbjct: 130 DGVANKAPPSSSATTATNK-SDQQVADTKILRTLASYLWMEDNPEFRLRVVLALGFLVGA 189

Query: 214 KILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGAS 273
           K+LNVQVPFLFKLAVDWLTTA+GNAAALASFT ANST+L LF+TPA+VL+GYGIAR+G+S
Sbjct: 190 KVLNVQVPFLFKLAVDWLTTATGNAAALASFTTANSTLLALFATPASVLIGYGIARTGSS 249

Query: 274 AFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           AFNELRTAVFSKVALRTIRSVSRKVFSHLH+LDL+YHL
Sbjct: 250 AFNELRTAVFSKVALRTIRSVSRKVFSHLHELDLRYHL 282

[Close]
BLAST of Csa6G133800 vs. TrEMBL
Match: A0A097P9Q8_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCB25 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 157/276 (56.88%), Postives = 189/276 (68.48%), Query Frame = 1 

Query: 8   LGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNFLTTHDDR 67
           LGA++  + + R L+   G     +   +N   L     GSIS   S++S ++       
Sbjct: 2   LGASKWFRFSTRELILRNGSCKKPVLLAQNNILLR----GSISSSSSVISGSYSA----- 61

Query: 68  IMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSANG 127
             Y+  +N RS  SS   + PL+ +  FLSD   SS+     S  MLNGR+ FSTS+ + 
Sbjct: 62  --YLPWKNLRSRRSS---AGPLN-LKNFLSDSGFSSAPSRPPSA-MLNGRVLFSTSAPSN 121

Query: 128 TEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKI 187
             A  +   K+     K  E  VAD KILRTLASYLWMKDN EFR RVI AL FLVGAK+
Sbjct: 122 PNANQNHGAKSSIATTKSEEKHVADMKILRTLASYLWMKDNFEFRLRVITALAFLVGAKV 181

Query: 188 LNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAF 247
           LNVQVPFLFKLAVDWL+TA+GNA ALASFT ANST++ LF+TPA+VL+GYGIARSGASAF
Sbjct: 182 LNVQVPFLFKLAVDWLSTATGNATALASFTTANSTLIALFATPASVLIGYGIARSGASAF 241

Query: 248 NELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           NELRTAVFSKVALRTIR VSRKVFSHLHDLDL++HL
Sbjct: 242 NELRTAVFSKVALRTIRQVSRKVFSHLHDLDLRFHL 261

[Close]
BLAST of Csa6G133800 vs. TrEMBL
Match: B9I784_POPTR (STARIK 1 family protein OS=Populus trichocarpa GN=POPTR_0013s15640g PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.2e-68
Identity = 158/278 (56.83%), Postives = 191/278 (68.71%), Query Frame = 1 

Query: 34  CNRNYNRLSTG----------ALGSISDRYSILSSNFLTTHDDRIMYIQGRNS------- 93
           C+R +N L  G          +L   +  +SI + N    H++R     GR+S       
Sbjct: 12  CSRAHNNLLLGNHNIKNNPLLSLCFFNHSHSIHTPN----HNNRPRCFPGRSSGTAIFAN 71

Query: 94  ------RSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQS-GFMLNGRLPFSTSSA---- 153
                 RSF++   N      ++AFLS+P+SSSST   +    +LNG   FST SA    
Sbjct: 72  SPSISNRSFTTPSWNHRRYLNLNAFLSNPASSSSTPPFRPPNSVLNGHALFSTMSAPKDK 131

Query: 154 NGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGA 213
           +G    + PS       NK S+ QVAD KILRTLASYLWM+DN EFR RV++ALGFLVGA
Sbjct: 132 DGVANKAPPSSSATTATNK-SDQQVADTKILRTLASYLWMEDNPEFRLRVVLALGFLVGA 191

Query: 214 KILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGAS 273
           K+LNVQVPFLFKLAVDWLTTA+ NAAALASFT ANST+L LF+TPA+VL+GYGIAR+G+S
Sbjct: 192 KVLNVQVPFLFKLAVDWLTTATSNAAALASFTTANSTLLALFATPASVLIGYGIARTGSS 251

Query: 274 AFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           AFNELRTAVFSKVALRTIRSVSRKVFSHLH+LDL+YHL
Sbjct: 252 AFNELRTAVFSKVALRTIRSVSRKVFSHLHELDLRYHL 284

[Close]
BLAST of Csa6G133800 vs. TrEMBL
Match: W9R5T1_9ROSA (ABC transporter B family member 25 OS=Morus notabilis GN=L484_022695 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.1e-68
Identity = 160/274 (58.39%), Postives = 186/274 (67.88%), Query Frame = 1 

Query: 13  LIQSNGRHLVSSKGGASFLI--YCNRNYNRLSTGALGSISDRYSILSSNFLTTHDDRIMY 72
           L+Q    H + + G    ++   C  +Y   STG  G  S  +    S F   H + I++
Sbjct: 17  LLQQRRIHRIRASGSLCVIVNDVCANHY---STGR-GRRSFVHGSAVSGF---HGNPILH 76

Query: 73  IQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEA 132
           +    +      RPN      + AF SD +   S   SQ G ++NGR  FSTSS +  + 
Sbjct: 77  VFSPTAARIP--RPN-----HISAFRSDYALEGSDSRSQPGSVVNGRSFFSTSSGDNKDD 136

Query: 133 ASSPSGKNIKPVNKGSESQ-VADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILN 192
               S     PV+KG++ Q VAD KILRTLA YLWMKDN EFR RVI ALGFLVGAK+LN
Sbjct: 137 GKKAS----TPVSKGTQDQQVADIKILRTLAGYLWMKDNPEFRLRVITALGFLVGAKVLN 196

Query: 193 VQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNE 252
           VQVPFLFKLAVDWLTTA+GNA ALASFT ANST+L  F+TPAAVL+GYGIARSGASAFNE
Sbjct: 197 VQVPFLFKLAVDWLTTATGNADALASFTTANSTILAFFATPAAVLIGYGIARSGASAFNE 256

Query: 253 LRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           LRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL
Sbjct: 257 LRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 272

[Close]
BLAST of Csa6G133800 vs. TAIR10
Match: AT5G58270.1 (AT5G58270.1 ABC transporter of the mitochondrion 3)

HSP 1 Score: 251.1 bits (640), Expect = 8.0e-67
Identity = 135/197 (68.53%), Postives = 154/197 (78.17%), Query Frame = 1 

Query: 92  VHAFLSDPSSSSSTKGS-----QSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGS 151
           ++AFLSD S S S   S     Q   MLNGRL FSTS+ N  +  +    K IK  +  S
Sbjct: 58  INAFLSDNSPSPSPSPSPIRFVQRSSMLNGRL-FSTSTPNPDQTTTKT--KEIKTTSSDS 117

Query: 152 ESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTA 211
           +S +AD KILRTLA YLWM+DN EFRFRVI ALGFLVGAK+LNVQVPFLFKLAVDWL +A
Sbjct: 118 DSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLASA 177

Query: 212 SGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSV 271
           +G  A+L +F A N T+LT+F+TPAAVL+GYGIAR+G+SAFNELRTAVFSKVALRTIRSV
Sbjct: 178 TGTGASLTTFAATNPTLLTVFATPAAVLIGYGIARTGSSAFNELRTAVFSKVALRTIRSV 237

Query: 272 SRKVFSHLHDLDLQYHL 284
           SRKVFSHLHDLDL+YHL
Sbjct: 238 SRKVFSHLHDLDLRYHL 251

[Close]
BLAST of Csa6G133800 vs. TAIR10
Match: AT4G28630.1 (AT4G28630.1 ABC transporter of the mitochondrion 1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 111/208 (53.37%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 78  SFSS--SRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEAASSPS 137
           SFSS   R +      ++AF +DPS S S   ++  F       FSTS+       S+P 
Sbjct: 26  SFSSFIKRSSIQRSPAINAFFTDPSPSPSPVNARVFF-------FSTST-------STP- 85

Query: 138 GKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFL 197
                  N+      +  KILRT++SYLWMKDN E RFRVI AL  L+GAK LNVQVPFL
Sbjct: 86  -------NQDQTKTASSKKILRTISSYLWMKDNPELRFRVIAALACLIGAKFLNVQVPFL 145

Query: 198 FKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVF 257
           FKL++D L++ S +     + T +N  +L  F+TP++VL+GYGIARSG+SAFNELRTAVF
Sbjct: 146 FKLSIDLLSSYSSS-----TITDSNPYLLAAFATPSSVLIGYGIARSGSSAFNELRTAVF 205

Query: 258 SKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           SKV+LRTIRSVSRKV SHLHDLDL+YHL
Sbjct: 206 SKVSLRTIRSVSRKVLSHLHDLDLRYHL 206

[Close]
BLAST of Csa6G133800 vs. TAIR10
Match: AT4G28620.1 (AT4G28620.1 ABC transporter of the mitochondrion 2)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 96/187 (51.34%), Postives = 126/187 (67.38%), Query Frame = 1 

Query: 97  SDPSSSSSTKGSQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGSESQVADAKIL 156
           S P+++S    S    M+N R+ F ++S       S+P  + I        ++ +   IL
Sbjct: 44  SPPTNASHQSPSPITPMVNARVMFFSTST------SAPHPEKI--------NRTSSENIL 103

Query: 157 RTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASF 216
           R ++SYLWMKDN +  FRVI A   LVGAK LNVQVPFLFK+A+DWL+++S        F
Sbjct: 104 RMISSYLWMKDNPKLCFRVISAFACLVGAKFLNVQVPFLFKVAIDWLSSSS--------F 163

Query: 217 TAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHD 276
             +N  ++  F+TP++VL+GYGIARSG+SAFNELRT+VFSKVALRTIR++SRKV S LHD
Sbjct: 164 VDSNPYLVAAFATPSSVLIGYGIARSGSSAFNELRTSVFSKVALRTIRTISRKVLSRLHD 208

Query: 277 LDLQYHL 284
           LDL+YHL
Sbjct: 224 LDLRYHL 208

[Close]
BLAST of Csa6G133800 vs. NCBI nr
Match: gi|700191567|gb|KGN46771.1| (hypothetical protein Csa_6G133800 [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 8.1e-154
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60
           MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF
Sbjct: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60

Query: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120
           LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF
Sbjct: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120

Query: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180
           STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG
Sbjct: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180

Query: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240
           FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA
Sbjct: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240

Query: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR 285
           RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR
Sbjct: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLR 284

[Close]
BLAST of Csa6G133800 vs. NCBI nr
Match: gi|449444328|ref|XP_004139927.1| (PREDICTED: ABC transporter B family member 25, mitochondrial [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 3.1e-153
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 

Query: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60
           MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF
Sbjct: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60

Query: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120
           LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF
Sbjct: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120

Query: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180
           STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG
Sbjct: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180

Query: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240
           FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA
Sbjct: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240

Query: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL
Sbjct: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 283

[Close]
BLAST of Csa6G133800 vs. NCBI nr
Match: gi|659112522|ref|XP_008456260.1| (PREDICTED: ABC transporter B family member 25, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 7.1e-142
Identity = 265/283 (93.64%), Postives = 269/283 (95.05%), Query Frame = 1 

Query: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60
           MLAACRCLGATELIQSNGRHL+S KGGASFLIYCNRNYNR STGALG ISDRY ILSS F
Sbjct: 1   MLAACRCLGATELIQSNGRHLMSFKGGASFLIYCNRNYNRFSTGALGIISDRYPILSSEF 60

Query: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120
           + THDDRIMYIQGRNSRSFSS R NSNPLSRVHAFL DPSSSSSTKGSQSG MLNGRL F
Sbjct: 61  VRTHDDRIMYIQGRNSRSFSSCRRNSNPLSRVHAFLPDPSSSSSTKGSQSGHMLNGRLVF 120

Query: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180
           STSSANG+EAASSP G NIKPV+KGSESQVAD KILRTLASYLWMKDNSEFRFRVIMALG
Sbjct: 121 STSSANGSEAASSPRGTNIKPVSKGSESQVADTKILRTLASYLWMKDNSEFRFRVIMALG 180

Query: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240
           FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA
Sbjct: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240

Query: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL
Sbjct: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 283

[Close]
BLAST of Csa6G133800 vs. NCBI nr
Match: gi|659112524|ref|XP_008456261.1| (PREDICTED: ABC transporter B family member 25, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 7.1e-142
Identity = 265/283 (93.64%), Postives = 269/283 (95.05%), Query Frame = 1 

Query: 1   MLAACRCLGATELIQSNGRHLVSSKGGASFLIYCNRNYNRLSTGALGSISDRYSILSSNF 60
           MLAACRCLGATELIQSNGRHL+S KGGASFLIYCNRNYNR STGALG ISDRY ILSS F
Sbjct: 1   MLAACRCLGATELIQSNGRHLMSFKGGASFLIYCNRNYNRFSTGALGIISDRYPILSSEF 60

Query: 61  LTTHDDRIMYIQGRNSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPF 120
           + THDDRIMYIQGRNSRSFSS R NSNPLSRVHAFL DPSSSSSTKGSQSG MLNGRL F
Sbjct: 61  VRTHDDRIMYIQGRNSRSFSSCRRNSNPLSRVHAFLPDPSSSSSTKGSQSGHMLNGRLVF 120

Query: 121 STSSANGTEAASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALG 180
           STSSANG+EAASSP G NIKPV+KGSESQVAD KILRTLASYLWMKDNSEFRFRVIMALG
Sbjct: 121 STSSANGSEAASSPRGTNIKPVSKGSESQVADTKILRTLASYLWMKDNSEFRFRVIMALG 180

Query: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240
           FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA
Sbjct: 181 FLVGAKILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIA 240

Query: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL
Sbjct: 241 RSGASAFNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 283

[Close]
BLAST of Csa6G133800 vs. NCBI nr
Match: gi|743928585|ref|XP_011008502.1| (PREDICTED: ABC transporter B family member 25, mitochondrial-like [Populus euphratica])

HSP 1 Score: 268.9 bits (686), Expect = 1.0e-68
Identity = 143/213 (67.14%), Postives = 170/213 (79.81%), Query Frame = 1 

Query: 75  NSRSFSSSRPNSNPLSRVHAFLSDPSSSSSTKGSQSGFMLNGRLPFSTSSA----NGTEA 134
           ++RSF++   N      ++AFLS+P+SSS+T       +LNG   FST++A    +G   
Sbjct: 75  SNRSFTTPSWNHRRYLNLNAFLSNPASSSATPFRPPNSVLNGHALFSTTAAPKDKDGVAN 134

Query: 135 ASSPSGKNIKPVNKGSESQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNV 194
            + PS       NK S+ QVAD KILRTLASYLWM+DN EFR RV+ ALGFLVGAK+LNV
Sbjct: 135 KAPPSSSATTATNK-SDQQVADTKILRTLASYLWMEDNPEFRLRVVFALGFLVGAKVLNV 194

Query: 195 QVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNEL 254
           QVPFLFKLAVDWLTTA+GNAAALASFT ANST+L LF+TPA+VL+GYGIAR+G+SAFNEL
Sbjct: 195 QVPFLFKLAVDWLTTATGNAAALASFTTANSTLLALFATPASVLIGYGIARTGSSAFNEL 254

Query: 255 RTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHL 284
           RTAVFSKVALRTIRSVSRKVFSHLH+LDL+YHL
Sbjct: 255 RTAVFSKVALRTIRSVSRKVFSHLHELDLRYHL 286

The following BLAST results are available for this feature:
BLAST of Csa6G133800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB25B_ARATH1.4e-6568.53ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABC... [more]
AB23B_ARATH2.5e-4653.37ABC transporter B family member 23, mitochondrial OS=Arabidopsis thaliana GN=ABC... [more]
AB24B_ARATH3.7e-4251.34ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABC... [more]
ABCB7_HUMAN1.4e-2850.00ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABC... [more]
ABCB7_RAT1.4e-2850.00ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus G... [more]
BLAST of Csa6G133800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG84_CUCSA5.6e-154100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G133800 PE=4 SV=1[more]
A9PJZ2_9ROSI7.3e-6957.19Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
A0A097P9Q8_HEVBR2.1e-6856.88ABC transporter family protein OS=Hevea brasiliensis GN=ABCB25 PE=2 SV=1[more]
B9I784_POPTR6.2e-6856.83STARIK 1 family protein OS=Populus trichocarpa GN=POPTR_0013s15640g PE=4 SV=1[more]
W9R5T1_9ROSA8.1e-6858.39ABC transporter B family member 25 OS=Morus notabilis GN=L484_022695 PE=4 SV=1[more]
BLAST of Csa6G133800 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58270.18.0e-6768.53 ABC transporter of the mitochondrion 3[more]
AT4G28630.11.4e-4753.37 ABC transporter of the mitochondrion 1[more]
AT4G28620.12.1e-4351.34 ABC transporter of the mitochondrion 2[more]
BLAST of Csa6G133800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191567|gb|KGN46771.1|8.1e-154100.00hypothetical protein Csa_6G133800 [Cucumis sativus][more]
gi|449444328|ref|XP_004139927.1|3.1e-153100.00PREDICTED: ABC transporter B family member 25, mitochondrial [Cucumis sativus][more]
gi|659112522|ref|XP_008456260.1|7.1e-14293.64PREDICTED: ABC transporter B family member 25, mitochondrial isoform X1 [Cucumis... [more]
gi|659112524|ref|XP_008456261.1|7.1e-14293.64PREDICTED: ABC transporter B family member 25, mitochondrial isoform X2 [Cucumis... [more]
gi|743928585|ref|XP_011008502.1|1.0e-6867.14PREDICTED: ABC transporter B family member 25, mitochondrial-like [Populus euphr... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0051276 chromosome organization
biological_process GO:0009630 gravitropism
biological_process GO:0006777 Mo-molybdopterin cofactor biosynthetic process
biological_process GO:0009555 pollen development
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0010380 regulation of chlorophyll biosynthetic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010288 response to lead ion
biological_process GO:0048364 root development
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU118204cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G133800.1Csa6G133800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU118204CU118204transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 175..282
score: 1.
IPR011527ABC transporter type 1, transmembrane domainPROFILEPS50929ABC_TM1Fcoord: 176..284
score: 11
IPR011527ABC transporter type 1, transmembrane domainunknownSSF90123ABC transporter transmembrane regioncoord: 169..283
score: 9.81
NoneNo IPR availableGENE3DG3DSA:1.20.1560.10coord: 170..283
score: 5.9
NoneNo IPR availablePANTHERPTHR24221FAMILY NOT NAMEDcoord: 229..283
score: 3.3E-47coord: 148..213
score: 3.3
NoneNo IPR availablePANTHERPTHR24221:SF187ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 7, MITOCHONDRIALcoord: 148..213
score: 3.3E-47coord: 229..283
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G133800Silver-seed gourdcarcuB0367
Csa6G133800Silver-seed gourdcarcuB1074
Csa6G133800Silver-seed gourdcarcuB1076
Csa6G133800Watermelon (97103) v2cuwmbB442
Csa6G133800Wax gourdcuwgoB597
Csa6G133800Cucumber (Chinese Long) v2cucuB172
Csa6G133800Cucumber (Gy14) v1cgycuB155
Csa6G133800Cucurbita maxima (Rimu)cmacuB563
Csa6G133800Cucurbita maxima (Rimu)cmacuB622
Csa6G133800Cucurbita maxima (Rimu)cmacuB634
Csa6G133800Cucurbita moschata (Rifu)cmocuB553
Csa6G133800Cucurbita moschata (Rifu)cmocuB622
Csa6G133800Melon (DHL92) v3.5.1cumeB443
Csa6G133800Watermelon (Charleston Gray)cuwcgB452
Csa6G133800Watermelon (97103) v1cuwmB526
Csa6G133800Cucurbita pepo (Zucchini)cpecuB282
Csa6G133800Cucurbita pepo (Zucchini)cpecuB743
Csa6G133800Bottle gourd (USVL1VR-Ls)culsiB407
Csa6G133800Cucumber (Gy14) v2cgybcuB282
Csa6G133800Melon (DHL92) v3.6.1cumedB424