Csa6G106180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G106180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNuclear RNA binding protein; contains IPR006861 (Hyaluronan/mRNA-binding protein), IPR019084 (Stm1, N-terminal)
LocationChr6 : 6945120 .. 6949764 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAATAAAAGGAGGAATTTAGGTCAGTTGAGTTCTCTTTTGCTCTCACTCACATCAGTCACTTCCATTGCGGCTAGGGTTTTTTCTTTTCTTCCTCTTCCCCCTTTTTTCCCTTTTTTTTCTTAAATTTATTTCTACAAGATCTCTTTGTTCTTTTATTATATTCATGGAGGTCTTGCTTAGATAGGTTTTGTTGATCTCCTTTCTCGGAGTGGAATTAATTTTCCTTTTTTTTTGTTAGCTCTTTTTTTGGGGTTTTTGGTTTCCAGATTGTTTCCAAATGACCACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCCTCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCCACGGCGCCGCTGTCTAAGAAAGCCCCTGCTCAGACCAAACCCCTTCCTTCTGGGGCCCAACTGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTAAGATTCTTCGTTGCTTAATTTTTGGTTTCGTTTTGAATATTTATGTTTTTCTTTTTTTAAAAAGTATCCCTTTGGTCGATCGATTTTACATTTTTCAGATAATGTTTATTCGTTTCGGTTTTAGGTGTTTGTTTTTCTTATTTAATTCTACGTAAGAGCGAAGGATGGTAATTGTTTTTAATTTGGTTGGAGTGTTGAAAATTTCCTCTTTTTTTTTTTCTCAAAAAATTTGTGGGATGGAACTGTTGTCTTCGTTTTATTGTGTGTTTGGCAGTTGAATTTTGTTCGTAACTTAGATAATACCGAATGAGTTGTTTGTTTTGGTATTGTGATTGGAGGATTAACGTATTGAAGTATTGCTTTTGGCTGAAATCTGATGTCTGAAATGCAGTTGTGAATAAATAAATTTTATTTTAATGTTTCAAGGCTTAAATAAGATTTTGTTTTCTTACTATGATATGTTGTTTTTCTTTACGTTGATTTTTAATAGTCATCTACTGATAGCAGTTGAACATTACCAAGTTGAATTTGTGATTGTTTATCGATTTGGGATCTTTTTTGGGAACTTGGAACTGTGCAAACAATTCTTCGTTATCATACCAGTAACATTTTTTTTGTCTTTCTTCGTCCTGTTAGATTATAATTTACCGACCTACTATTGTTTATCCTTCAAATTCTTGTGAGTGTCCACTGAAACGAATTATCCATTAAGTGATTAAGATAATCTTTTTCTTACTTTGTGTAGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGGTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTACCAATAATGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACATCTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGAGGTGGTTTCAATGATGGAGAAGGTGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGTCGTGGGTAAGTGTCTATTGTCTGTTCTTTTAAATTTTATTGTGCACACTCCTGCTGTATATTCTACACTGTTTTGACGCTTTATTCCTGATTTTATGCCTAGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACCGACGAATTTGCTGAGTAAGTACATGTGTATACCTTCAATCTTCATGCATGTCTTTTTCCAGGTATTATGTGTAATTGTGCGTACATGAGCCTTCTTCTCAATCCTTCTCATAGAAGCTGCCAGGTTGGCTTGAAAGACAAATTTATATAGTCAGGCATTCCTTTCTCAATATGTGGAAGATGCTCTCAACCACATCGTATACGGGGAGCTTGGCTAACTTCATTTTTCTTTTCAGGGAGAGGGTTGCATTTTTATGCTCATGTTATTATCTCTTGTATGCTAATAAGATTGTTCTCTCCTTGACAACTAGTTATGCCTAAAATTTCTGTTTTATATTTAGGGTAGCAGGGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAAAAGCCTATTCAAGAGGATGATACATCAGGTGTGAACACGGAGAACCCTGCTAAAGAACCACAGGAAACCGAACCAGAAGACAAGGTTAGTATCTTCAGATTTTAGTAAACTTCCCATAAATGTGGGACCTACTATCTCACTTGTTTTGATTTTCTTCTGGCTGAAAAGCGACTTGTAGTTTTGCTTGCATGTCAAGTTGAACAGGCTTTATTACTTCACTTCTAGTAGCATAAATTTGATACGTGTAGCAGTTGTAAATTTGAATGCGTATATCAATCTGATGGGCTTGGGTTGCGAAGTCTTTTGTACTGTTTGACTTGATTTTGAATCTAATGTACTCTTTTTTTTTCGATGCAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAATGACATATTTATTAAATTGGTACACCTACTTAACACTCTTTCGCTGTTGATATATCCCCTATGGGATCTGATGACCCTTGGCCTTGCATTAAATGAGGACTTGACAGTTTTATCTCATTTGTTACCCCACTTGTAGGGATCTGAAAAGGATAAGCGAAAAGAAATGGCAGATAAAGAGGAGAGAACTAAGAAGGTATTATTATCTCATCTTCTTTAAATATTTCTGACTTTTAAATTGTTTACTCGGGTTTTACCCTACGCCTGGCAAAATTTTAAAAGTCTTAGGGCAGCCACCAGCTTTTGTTTTCCTTAGTGACGCAAGGGCAAGTATTTAGCCATAAATCTCATTTTGAACATAACAATTAATGCATAACACACAACACATAGTAAAAGATAAAATGAAAAATCTCAATTTCCGATCAATATACATTAGTTTTCACGAGTTATTATTCATCTAAGATCATTCTCATAATGGAGAAACGAAACTGGAAAGACTAAAATTTTGCCTTGCCCCAAGAAGATAAACAATGCGACTCTAGACTCTAGACCCTACGAGCCTATATTTTTTCCAAAGTTGTTTTGATGAATTGAATGAACAAAGAAAAAGAGACAAAAATGAAATGGTAAACGAGGAAAGGAAAAAAAAATCGAGAGAAAGAACAGACCTTTTAGGTTGTCTCGTCTCTTAGCGCCCCAAACACCTTTCCCACCTACAAAGGAAGACAAAATTATGGCTGTCTTTTAGTGTGACCTGTTACTTTTCAGGCATAAATTATTGAGTTTTATACTTCAGATAATGTGCAAGTTGTTTGTTTTAGTGACAAATAAATGTTGTCTTTTCGGCACTCATCCCATTAAACAGACCCACAACCTGACACTAGTACTAAAATTTTCTCCGAAGTCAATTATGTATGAAGCATATGCTTTCCACGTTTCAATAGTGTAACCATGGAGGAGCGTGCCTCTTGTTCAAAATAAATAAAGGCTACTCTAACTTCAGAAACCTTCTATCCTTGAGGCATGAGCCTTACATTTTGAAAATGTTGATGTCCGCCAGCACATAGGATGCTCTTTATTTGGTTTATTCCGAACCTACCTTAAGAAATTTAATTGAATTACTTTTTCTTTTAAGAATATTATATCAGTGGTTGAAATTTGCACTGATGACCTATTAACGTAGGTAGAGGTGACGGCATACTTTGTGAGCCCATGCTGAGACTGACCGGAAGAAATTGAATATGATAATATTACTCAATTTTTAGAACCATTATTAGAGGAAACTAAGGTTATTTTAAATTGTGCTTTGATGAGTTTTATTTGGCAAAATGATTGCAATGAAATCATCCATCAATTTGATTATAGTAGACTTCCAAAAAAATGAATTTAATGCGTTAAAGTAGTCTTTATTCCAAATGATAGAATTTGCTTCCAAATATTTTCTTATACAAAGCTTTGGTTCTAACTTCTAATTAGGCTCATATCAGCATAAAGGAGTTTTTATTTTGCTTGCCATACAACATTGTTTTGGCCGTTCTAGACCCTGTAAAAGGTTAAATGACTGATGTTTTTCTTCTTCACTTAGTCTTTGAGTATCAACGAGTTTTTGAGGCCTGCGGACGGAGAGCGTCACTACGCCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCCCGATGAGCAATGTTGCAGCCCCATCCATTGGAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAAATTTCGCAAATAAATTTTCCCTTACAAAACTGTGTTTTTGATCTGGGGCAGGAAACTGACTAGAATAATATAGTCTCTCCTGTATCAAAATGATTTTTAAGTTTAATTTGTTTAGGTGTAAATTGTCAAAGTCCTTGTATTTTCCCTTGTCCACCTTTCTTTGTGTGTTTTCAACTGTTGTTTCAAGACTGTTTGCCAGATCAAACTGTTTATTTATGGACTTCCTTCTTCCCCATCTGAATTTGGCGTTTTGTTTTTCATTTGTTGCTCTTAATGGTTCCGATAATTGCTTTTTGCTATTTGTCAAGTATATGGAATGAATTTTCCTT

mRNA sequence

ATGACCACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCCTCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCCACGGCGCCGCTGTCTAAGAAAGCCCCTGCTCAGACCAAACCCCTTCCTTCTGGGGCCCAACTGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGGTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTACCAATAATGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACATCTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGAGGTGGTTTCAATGATGGAGAAGGTGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGTCGTGGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACCGACGAATTTGCTGAGGTAGCAGGGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAAAAGCCTATTCAAGAGGATGATACATCAGGTGTGAACACGGAGAACCCTGCTAAAGAACCACAGGAAACCGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAATGACATATTTATTAAATTGGGATCTGAAAAGGATAAGCGAAAAGAAATGGCAGATAAAGAGGAGAGAACTAAGAAGTCTTTGAGTATCAACGAGTTTTTGAGGCCTGCGGACGGAGAGCGTCACTACGCCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCCCGATGAGCAATGTTGCAGCCCCATCCATTGGAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAA

Coding sequence (CDS)

ATGACCACCCTTAATCCTTTTGATTTGTTGGGGGATGATGATGCTGAGGACCCCTCTCAGCTAATTGCGGCTAAGGTGGCGGCGGTGGCCACGGCGCCGCTGTCTAAGAAAGCCCCTGCTCAGACCAAACCCCTTCCTTCTGGGGCCCAACTGAATAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAATCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGTGGAGGACGGGGATATGGGTATGGGCGAGGTCGCGAGGGTGGTGGGTTTAATCGAGACTCTACCAATAATGAGAACATTAATGCACCTGAAGATGGAGTGGGTGGTAAGACATCTGAAAGACGTGGATATGGTGGGCCTCGTGGTCGTGGTGGCCGTCGAGGTGGTTTCAATGATGGAGAAGGTGCTGAAGGGGAACGCCCTCGTAGAGCATTTGAACGCCACAGTGGAACTGGTCGTGGAAATGAATTTAAACGAGAAGGGTCTGGTCGTGGAAATTGGGGAAGGTCAACCGACGAATTTGCTGAGGTAGCAGGGGAAACCGTTAATGAAACTGAAAAGAATGTGGGTGACGAAAAGCCTATTCAAGAGGATGATACATCAGGTGTGAACACGGAGAACCCTGCTAAAGAACCACAGGAAACCGAACCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTTGAGGATAAAAGGAAGGCCCTTCTAGCTCTAAAAACTGAGGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAATGACATATTTATTAAATTGGGATCTGAAAAGGATAAGCGAAAAGAAATGGCAGATAAAGAGGAGAGAACTAAGAAGTCTTTGAGTATCAACGAGTTTTTGAGGCCTGCGGACGGAGAGCGTCACTACGCCCCTGGTGGCCGAGGAAGGGGTCGTGGACGTGGTTCAAGGGGAGGATACAGTGGCAGCCCGATGAGCAATGTTGCAGCCCCATCCATTGGAGACCCTGGGCAGTTCCCAACCTTAGGTGCGAAGTAA

Protein sequence

MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSKPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGAK*
Homology
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BLAST of Csa6G106180 vs. Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-08
Identity = 49/116 (42.24%), Postives = 49/116 (42.24%), Query Frame = 1 

Query: 70  ESRNEGSRGGRGSGRGGGRGYGYGRGREG--GGFNRDSTNNENINAPEDGVGGKTSE--- 129
           E    G   GRG GRGGGRG G G GR G  GG             P  G GG+  E   
Sbjct: 2   EHERGGGGRGRGRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPGG 61

Query: 130 RRGYGGPRGRGGR-RGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180
            RGYGG  G GGR  GG   G G E    R     + G GRG E    G GRG  G
Sbjct: 62  GRGYGGGGGGGGRGYGGGGGGGGYESGGGR----GYGGGGRGYE---SGGGRGPGG 110


HSP 2 Score: 36.2 bits (82), Expect = 9.1e-01
Identity = 35/101 (34.65%), Postives = 35/101 (34.65%), Query Frame = 1 

Query: 78  GGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGY--GGPRGRG 137
           GG G GRG G G G G    GGG                G GG     RGY  GG RG G
Sbjct: 68  GGGGGGRGYGGGGGGGGYESGGG---------------RGYGG---GGRGYESGGGRGPG 127

Query: 138 GRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRG 177
           G   G   G G              G   GN + + G GRG
Sbjct: 128 GGGRGHESGGG--------------GGRGGNVWAQPGRGRG 136


HSP 3 Score: 29.6 bits (65), Expect = 8.5e+01
Identity = 15/24 (62.50%), Postives = 13/24 (54.17%), Query Frame = 1 

Query: 316 ERHYAPGGRGRGRGR-GSRGGYSG 339
           E     GGRGRGRGR G RGG  G
Sbjct: 2   EHERGGGGRGRGRGRGGGRGGGGG 25

[Close]
BLAST of Csa6G106180 vs. Swiss-Prot
Match: RBP56_HUMAN (TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.9e-08
Identity = 47/135 (34.81%), Postives = 54/135 (40.00%), Query Frame = 1 

Query: 50  QLNKPASLPSKPLPPAQAVRESRNEGSRGGRG-SGRGGGRGYGYGRGREGGGFNRDSTNN 109
           Q N+P   P    P     R     G RG RG  GRGG RG GYG  R GGG+  D ++ 
Sbjct: 378 QCNEPR--PEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRG-GYGGDRSGGGYGGDRSSG 437

Query: 110 ENINAPEDGVG-GKTSERRGYGGPRG---RGGRRGGFNDGEGAEGERPRRAFERHSGTGR 169
              +    G G G      GYGG RG    G R GG+    G      R  +    G G 
Sbjct: 438 GGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGY 497

Query: 170 GNEFKREGSGRGNWG 180
           G +    G  RG +G
Sbjct: 498 GGDRGGYGGDRGGYG 509


HSP 2 Score: 49.7 bits (117), Expect = 7.9e-05
Identity = 49/136 (36.03%), Postives = 53/136 (38.97%), Query Frame = 1 

Query: 72  RNEGSRGGRGSGRGGGRGYGYGRGREG--------------GGFN---RDSTNNENINAP 131
           R  GS GGR  GRGG RG G  +GR G              G  N   R+S N  N   P
Sbjct: 326 RGGGSGGGR-RGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRP 385

Query: 132 ED-----------GVGGKTSERRGYGGPRGRGGRRGGF---NDGEGAEGERPRRAFERHS 177
           ED           G GG+    RGY G  GRGG RGG+     G G  G+R         
Sbjct: 386 EDSRPSGGDFRGRGYGGE----RGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGD 445


HSP 3 Score: 32.3 bits (72), Expect = 1.3e+01
Identity = 25/65 (38.46%), Postives = 30/65 (46.15%), Query Frame = 1 

Query: 124 ERRGYGGPRGRGGRRGGFN-DGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRST 183
           + RGYGG +G G  RGG++ DG G             SG  RG  FK  G G  ++G  T
Sbjct: 173 DNRGYGGSQGGGRGRGGYDKDGRG--------PMTGSSGGDRGG-FKNFG-GHRDYGPRT 227

Query: 184 DEFAE 188
           D  +E
Sbjct: 233 DADSE 227

[Close]
BLAST of Csa6G106180 vs. Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.7e-08
Identity = 47/119 (39.50%), Postives = 48/119 (40.34%), Query Frame = 1 

Query: 75  GSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGGPRGR 134
           G   GRG G GGG G G+G GR  GG                  GG    R G+GG RG 
Sbjct: 20  GGFRGRGGGGGGGGG-GFGGGRGRGG------------------GGDRGGRGGFGGGRGG 79

Query: 135 GGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTDEFAEVAGETV 194
           GGR GG   G GA G        R  G GRG    R G GRG  GR         G+TV
Sbjct: 80  GGRGGGGGGGRGAFG-------GRGGGGGRGGG-GRGGGGRGGGGRGGGAGGFKGGKTV 111


HSP 2 Score: 45.8 bits (107), Expect = 1.1e-03
Identity = 38/97 (39.18%), Postives = 41/97 (42.27%), Query Frame = 1 

Query: 73  NEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGGPR 132
           + G RGG G GRGGG     GRG  GGG                G GG+    RG GG R
Sbjct: 47  DRGGRGGFGGGRGGG-----GRGGGGGG-------GRGAFGGRGGGGGRGGGGRG-GGGR 106

Query: 133 GRGGRRGGFNDGEGAEGERPRRAFERHSGT--GRGNE 168
           G GGR GG    +G  G+       RH G    RG E
Sbjct: 107 GGGGRGGGAGGFKG--GKTVTIEPHRHEGVFIARGKE 128

[Close]
BLAST of Csa6G106180 vs. Swiss-Prot
Match: AGO3_ARATH (Protein argonaute 3 OS=Arabidopsis thaliana GN=AGO3 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 55/174 (31.61%), Postives = 63/174 (36.21%), Query Frame = 1 

Query: 75  GSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGY------ 134
           G RGGRG GRG G G   GRG  G G               DG G      RGY      
Sbjct: 5   GYRGGRGDGRGRGGGGDRGRGYSGRG---------------DGRGRGGDGDRGYSGRGDG 64

Query: 135 -----GGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTD 194
                GG RGRG    G   G G  G+R R    R  G GRG    R   GRG  GR   
Sbjct: 65  HGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRGDGHGRGGGGDR---GRGYSGRGRG 124

Query: 195 EFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 238
              +  G  VN  + + G  +        G  T+     PQE  P   +  + +
Sbjct: 125 FVQDRDGGWVNPGQSSGGHVR--------GRGTQLQQPPPQEVPPSSSQAQVSQ 152


HSP 2 Score: 29.6 bits (65), Expect = 8.5e+01
Identity = 17/30 (56.67%), Postives = 17/30 (56.67%), Query Frame = 1 

Query: 311 RPADGERHYAPGGRGRGR-GRGSRG-GYSG 339
           R  DG+R Y+  G G GR G G RG GYSG
Sbjct: 35  RGGDGDRGYSGRGDGHGRGGGGDRGRGYSG 64

[Close]
BLAST of Csa6G106180 vs. Swiss-Prot
Match: IF2_SACEN (Translation initiation factor IF-2 OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) GN=infB PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-07
Identity = 46/129 (35.66%), Postives = 51/129 (39.53%), Query Frame = 1 

Query: 48  GAQLNKPASLPSKPLPPAQAVRESRNEGSR-GGRGSGRGGGRGYGYGRGREGGGFNRDST 107
           G     P  +P +P P     R +R+ G   GGRG GRGG  G G GR   GGG  R   
Sbjct: 286 GGNRPNPGMMPPRPNPGMMPSRPARSGGGPGGGRGGGRGGPGGGGGGRPGGGGGGGRPGG 345

Query: 108 NNENI---NAPEDGVGGKTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTG 167
                     P  G G       G+ G  G GGR GG     GA G     AF R  G  
Sbjct: 346 GGGGFRGGGGPGAGAGTGAPAGGGFRGRPGGGGRPGGPGGRGGAAG-----AFGRPGGPA 405

Query: 168 -RGNEFKRE 172
            RG + KR+
Sbjct: 406 RRGRKSKRQ 409


HSP 2 Score: 29.3 bits (64), Expect = 1.1e+02
Identity = 14/28 (50.00%), Postives = 14/28 (50.00%), Query Frame = 1 

Query: 312 PADGERHYAPGGRGRGRGRGSRGGYSGS 340
           PA G     PGG GR  G G RGG +G+
Sbjct: 365 PAGGGFRGRPGGGGRPGGPGGRGGAAGA 392

[Close]
BLAST of Csa6G106180 vs. TrEMBL
Match: A0A0A0K9Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 7.8e-209
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240
           STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300
           LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360
           KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]
BLAST of Csa6G106180 vs. TrEMBL
Match: A0A0A0KCI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.6e-148
Identity = 277/366 (75.68%), Postives = 310/366 (84.70%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M T NPFDLLGDDDAEDPSQL+A K AA A    S   P   +   + A+L+KPA+LPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAPKKGSDH-PQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI--NAPEDGV 120
           PLPPAQAVRE++NEG RGGR SGRGG    GYGRGR  GGFNR+S NNE    + PEDG 
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGRGGR---GYGRGRGSGGFNRESPNNEYSFSSNPEDGE 120

Query: 121 GGKTSERRG-YGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGN 180
            G+T+E+RG YGGPRGRGGRRGGF +G+ A+GERPR AFERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 240
           WGRS +EF EVA E  NE++K +GDEKP+ EDDT+GVNTENPAKE +E EPEDKEMTLEE
Sbjct: 181 WGRSAEEFPEVA-EEANESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEE 240

Query: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKE 300
           YEKLL++KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N DIFIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKE 300

Query: 301 ERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSR-GGYSGSPM-SNVAAPSIGDPGQF 360
           ERTKKS+SINEFL+PA+GE+HY PGGRGRGRGRGSR GGY GS M SNVAAPSI DPGQF
Sbjct: 301 ERTKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRGGGYVGSSMSSNVAAPSIEDPGQF 360

Query: 361 PTLGAK 362
           PTLGAK
Sbjct: 361 PTLGAK 360

[Close]
BLAST of Csa6G106180 vs. TrEMBL
Match: D7SLZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.2e-134
Identity = 260/377 (68.97%), Postives = 288/377 (76.39%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAK--VAAVATAPLSKKAPAQTKPLPSGAQLNKPASLP 60
           M T+NPFDLLGDDD+EDPSQLIAA+  V   A AP    APAQ           KPA LP
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIVPKKALAPTQAAAPAQQA---------KPAKLP 60

Query: 61  SKPLPPAQAVRESRNEGSRGGRGSGRGGGRG-YGYGRGREGGGFNRDSTNNENI------ 120
           SKP+PPAQAVRE +NE       SGRGGGRG  GYGRGR GGGFNRD  NNEN       
Sbjct: 61  SKPVPPAQAVREGKNE-------SGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGV 120

Query: 121 ----NAPEDGVGGKTSERRGYGGPRGR-GGRRGGFNDGEGAEGERPRRAFERHSGTGRGN 180
                APEDG GGK SERR YGGPR    GRRGGF++GE  +G+RPRRAFER SGTGRGN
Sbjct: 121 AGGQGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGN 180

Query: 181 EFKREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQET 240
           E KREGSGRGNWG  TDE + V  E VNE EKN+G EKP+ E+D +  N ENP  EP+E 
Sbjct: 181 ELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEK 240

Query: 241 EPEDKEMTLEEYEKLLEDKRKALLALKTEERKVD-PKEFASMQQLSSKKDNNDIFIKLGS 300
           EPE+KEMTLEEYEK+LE++RKAL  LKTEERKVD  KEF SMQQLSSKK N+DIFIKLGS
Sbjct: 241 EPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGS 300

Query: 301 EKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGY-SGSPMSNV 360
           +KDKRKE A+KEER KK++SINEFL+PA+GER Y+PGGRGRGRGRGSRGGY  G+ MSNV
Sbjct: 301 DKDKRKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNV 360

Query: 361 AAPSIGDPGQFPTLGAK 362
           AAPSI DPGQFPTLGAK
Sbjct: 361 AAPSIEDPGQFPTLGAK 361

[Close]
BLAST of Csa6G106180 vs. TrEMBL
Match: M5X0A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.8e-133
Identity = 258/375 (68.80%), Postives = 293/375 (78.13%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M T+NPFDLLGDDDAEDPSQL+AA+   +A AP  K  PAQ K    G Q  KPA LPSK
Sbjct: 1   MATMNPFDLLGDDDAEDPSQLLAAQQQKLAAAP-KKALPAQNKSGAQG-QETKPAKLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI----NAP-- 120
           P PPAQAVRE+RNE   GGRG GRG  RGYGY RGR GGG+NR+S NNEN      AP  
Sbjct: 61  PAPPAQAVREARNEAG-GGRGGGRG--RGYGYSRGRGGGGYNRESPNNENTFTNSGAPAG 120

Query: 121 ----EDGVGGKTSERRGYGGPRG--RGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEF 180
               EDG G + SERRGYGGPRG  RGGRRGGF +GE ++GERPRR FER SGTGRG+E 
Sbjct: 121 QGAFEDGDGNQ-SERRGYGGPRGPYRGGRRGGFGNGEVSDGERPRRVFERRSGTGRGSEI 180

Query: 181 KREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEP 240
           KREGSGRGNWG  TDE ++V  E  N TE+N+GDEKP+ E D +  N E PA EP+E EP
Sbjct: 181 KREGSGRGNWGSETDELSQVIEEVANVTERNLGDEKPVGEVDAADGNKETPANEPEEKEP 240

Query: 241 EDKEMTLEEYEKLLEDKRKALLALKT-EERKVDPKEFASMQQLSSKKDNNDIFIKLGSEK 300
           EDKEMTLEEYEK+LE+KRKAL ALKT EERKVD KEFAS+QQLS+KK N+DIFIKLGS+K
Sbjct: 241 EDKEMTLEEYEKVLEEKRKALQALKTSEERKVDTKEFASLQQLSNKKGNDDIFIKLGSDK 300

Query: 301 DKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGS-PMSNVAA 360
           DK+KE A+KEE++KKS+SINEFL+PA+GER Y PGGRGRGRGRG RGG+S +    + AA
Sbjct: 301 DKKKEAAEKEEKSKKSVSINEFLKPAEGERFYNPGGRGRGRGRGPRGGFSNNYSHGSAAA 360

Query: 361 PSIGDPGQFPTLGAK 362
           PSI DPGQFPTLGAK
Sbjct: 361 PSIEDPGQFPTLGAK 369

[Close]
BLAST of Csa6G106180 vs. TrEMBL
Match: A0A151RAW5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038893 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 5.0e-131
Identity = 251/377 (66.58%), Postives = 293/377 (77.72%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSG---AQLNKPASL 60
           M T NPFDLLGDD AEDPSQLIAA+    A AP  K+   Q KP   G   AQ +KPA L
Sbjct: 1   MATANPFDLLGDD-AEDPSQLIAAEQLKAAAAPPKKE---QAKPGARGGAVAQPSKPAQL 60

Query: 61  PSKPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAP--- 120
           PSKPLPP QAVRE++++ SRGGRG GRGGGRG+G GRG   GGF RD +N+EN +AP   
Sbjct: 61  PSKPLPPTQAVREAKSDVSRGGRGGGRGGGRGFGRGRG--SGGFGRDYSNDENSSAPANQ 120

Query: 121 ---EDGVGGKTSERRGYGGPRGR------GGRRGGFNDGEGAEGERPRRAFERHSGTGRG 180
              E    G  SERRGYGGP G       GGRRGGF++G+  E  RPRRAFERHSGTGRG
Sbjct: 121 GAFEGDDSGNPSERRGYGGPGGPRGPYRGGGRRGGFSNGQVGEDGRPRRAFERHSGTGRG 180

Query: 181 NEFKREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQE 240
           NEFKR+G+GRGNWG  +D+ AEV  E VNE+EKN+GDEKP  E+D +  N ++PA E +E
Sbjct: 181 NEFKRDGAGRGNWGTQSDDIAEVTEEVVNESEKNLGDEKPAGEEDGAEGNKDSPANENEE 240

Query: 241 TEPEDKEMTLEEYEKLLEDKRKALLALKTE-ERKVDPKEFASMQQLSSKKDNNDIFIKLG 300
            EPEDKEMTLEEYEK+LE++RKAL ALKTE  RKVD KEFASMQ LS+KKDN++IFIKLG
Sbjct: 241 KEPEDKEMTLEEYEKVLEERRKALQALKTEATRKVDIKEFASMQPLSNKKDNDEIFIKLG 300

Query: 301 SEKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNV 360
           S+KDKRK+  DKEE++KKS++I+EFL+PA+GER+Y PGGRGRGRGRGSRGGYSG+  SNV
Sbjct: 301 SDKDKRKDALDKEEKSKKSVNIHEFLKPAEGERYYNPGGRGRGRGRGSRGGYSGNAGSNV 360

Query: 361 AAPSIGDPGQFPTLGAK 362
            APSI DPGQFPTLG K
Sbjct: 361 PAPSIEDPGQFPTLGGK 371

[Close]
BLAST of Csa6G106180 vs. TAIR10
Match: AT4G16830.1 (AT4G16830.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 335.9 bits (860), Expect = 3.1e-92
Identity = 209/379 (55.15%), Postives = 244/379 (64.38%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSK-KAPAQTKPLPSGAQLNKPASLPS 60
           M TLNPFDLL DDDAEDPSQL      AVA   + K K   Q   LP+         LPS
Sbjct: 1   MATLNPFDLL-DDDAEDPSQL------AVAIEKIDKSKKSGQVSSLPA----KSAPKLPS 60

Query: 61  KPLPPAQAVRESRNEGSRGGRGSGRGG---GRGYGYGRGREGGGFNRDSTNNENINAPED 120
           KPLPPAQAVRE+R++  RGG   GRGG   GRG GY R     G++   T        E 
Sbjct: 61  KPLPPAQAVREARSDAPRGG--GGRGGFNRGRG-GYNRDDGNNGYSGGYTKPSG----EG 120

Query: 121 GVGGKTSERRGYGG-PRGR---------GGRRGGFNDGEGAEGERPRRAFERHSGTGRGN 180
            V   + ERRG GG PRG          GGRRGGF++ EG +GERPRRAFER SGTGRG+
Sbjct: 121 DVSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGS 180

Query: 181 EFKREGSGRGNWGRSTDEFA-EVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQE 240
           +FKR+GSGRGNWG   +E A E       ETEK+VG EKP  +D  +  N E+   E  E
Sbjct: 181 DFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTVVE--E 240

Query: 241 TEPEDKEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGS 300
            EPEDKEMTL+EYEK+LE+K+KAL +L T ERKVD K F SMQQLS+KK N++IFIKLGS
Sbjct: 241 KEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGS 300

Query: 301 EKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMS--- 360
           +KDKRK+  DKEE+ KK++SINEFL+PA+G  +Y  G  GRGRG   RGG S        
Sbjct: 301 DKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYR 355

Query: 361 NVAAPSIGDPGQFPTLGAK 362
           N AAP+IGD  QFP+LG K
Sbjct: 361 NEAAPAIGDAAQFPSLGGK 355

[Close]
BLAST of Csa6G106180 vs. TAIR10
Match: AT4G17520.1 (AT4G17520.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 314.3 bits (804), Expect = 9.7e-86
Identity = 191/386 (49.48%), Postives = 237/386 (61.40%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M ++NPFDLL DDDAEDPSQ++A+K       PL   AP QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120
           P PP+QAVRE+RN       G GRG GRG  YGRG  GG  NRDS NN+   A E+G GG
Sbjct: 61  PPPPSQAVREARN-----APGGGRGAGRGGSYGRGGRGGN-NRDSRNNDG-PANENGYGG 120

Query: 121 ---KTSERRGY--GGPRG--RGGRRGGF-NDGEGAEGERPRRAFERHSGTGRGNEFKREG 180
              ++ E  G   GGP G  RG RRG + N G+  + ERPR+ ++RHS T  GNE KR+G
Sbjct: 121 GYRRSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDG 180

Query: 181 SGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKE 240
           +GR NWG + D+   V  E+    +KN+  EK   E + +    E PA++ +E +PEDKE
Sbjct: 181 AGRANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKE 240

Query: 241 MTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNND-IFIKLGSEKDKRK 300
           MTLEEYEK+LE+K+KAL A K EERKVD K F +MQQLSSKK NND +FIKLG+EKDKR 
Sbjct: 241 MTLEEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR- 300

Query: 301 EMADKEERTKKSLSINEFLRPADGERHYAP-----GGR-------------GRGRGRGSR 360
            + ++EE+T+KSLSINEFL+PADG+ +Y P     GGR             GR    G R
Sbjct: 301 -ITEREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGR 359

[Close]
BLAST of Csa6G106180 vs. TAIR10
Match: AT5G47210.1 (AT5G47210.1 Hyaluronan / mRNA binding family)

HSP 1 Score: 299.3 bits (765), Expect = 3.2e-81
Identity = 191/378 (50.53%), Postives = 231/378 (61.11%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M +LNPFDLLGDD AEDPSQL      AVA +   +KA A  +P        K A  P+K
Sbjct: 1   MASLNPFDLLGDD-AEDPSQL------AVALSQKVEKAAAAVQP-------PKAAKFPTK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNE---NINAPEDG 120
           P PP+QAVRESRN   +GGRG    GGRG G+ RGR  GG+NRD+ NN+   N N    G
Sbjct: 61  PAPPSQAVRESRN-APQGGRGGT--GGRG-GFSRGRGNGGYNRDNRNNDAPGNENGFSGG 120

Query: 121 VGGKTSERRG------YGGPRGRGGR----RGGFNDGEGAEGERPRRAFERHSGTGRGNE 180
               + +  G       GG R  GGR    RGG  +GE  + ERP R ++RHS TG G  
Sbjct: 121 YRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTG 180

Query: 181 FKREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETE 240
            KR G GRGNWG + D+    + E   E EK+   EK   ED+T     E  A+E  + E
Sbjct: 181 MKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKE 240

Query: 241 PED---KEMTLEEYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKD-NNDIFIKL 300
            E+   +EMTLEEYEK+LE+K+KAL A K EERKVD K F SMQQLS+KK+ + +IFIKL
Sbjct: 241 AEEAEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKL 300

Query: 301 GSEKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGR-GRGSRG-GYSGSPM 360
           GS+K+KRK   D  E+ KKSLSINEFL+PADG+R+   GG  RGR GRG RG G +    
Sbjct: 301 GSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYA 357

[Close]
BLAST of Csa6G106180 vs. TAIR10
Match: AT3G07030.1 (AT3G07030.1 Alba DNA/RNA-binding protein)

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 43/109 (39.45%), Postives = 47/109 (43.12%), Query Frame = 1 

Query: 75  GSRGGRGSGR----GGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGG 134
           G RGG G GR    GGGR  GYG  R  G   R   N+      +DG GG   +  GYGG
Sbjct: 214 GGRGGYGGGRDGGYGGGRDDGYGERRNDGYGER--RNDRYGGGRDDGYGGGRDD--GYGG 273

Query: 135 PR--GRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGN 178
            R  G GGRRGGF  G G   +          G   G +    G GRG+
Sbjct: 274 GRNDGYGGRRGGFRGGRGGGRDEGYGGGRGGYGGRSGGQGDGYGGGRGD 318


HSP 2 Score: 56.2 bits (134), Expect = 4.8e-08
Identity = 46/123 (37.40%), Postives = 49/123 (39.84%), Query Frame = 1 

Query: 75  GSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGGPRG- 134
           G RGG   GRGGGR  GYG GR G G       +       DG GG   +  GYGG RG 
Sbjct: 277 GRRGGFRGGRGGGRDEGYGGGRGGYGGRSGGQGDGYGGGRGDGYGGGRGD--GYGGGRGD 336

Query: 135 ----------RGGRRGGFNDG--EGAEGERPRRAFERHSGTGRGNEFKREGSGR-GNWGR 184
                      GGRR G+  G  +G  G +         G   G      G GR GN GR
Sbjct: 337 GYGGGRVDRYDGGRRDGYGGGRYDGYGGGKSDGYGGGRGGYRGGRGGYGRGRGRMGNGGR 396


HSP 3 Score: 52.4 bits (124), Expect = 6.9e-07
Identity = 38/109 (34.86%), Postives = 46/109 (42.20%), Query Frame = 1 

Query: 72  RNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKT-SERRGYGG 131
           R++G  GGR  G GGGR  GYG  R G    R    +E       G GG++  +  GYGG
Sbjct: 255 RDDGYGGGRDDGYGGGRNDGYGGRRGGFRGGRGGGRDEGYGGGRGGYGGRSGGQGDGYGG 314

Query: 132 PRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180
            RG G    G   G+G  G        R  G G G   + +G  R  +G
Sbjct: 315 GRGDG---YGGGRGDGYGG-------GRGDGYGGGRVDRYDGGRRDGYG 353


HSP 4 Score: 45.8 bits (107), Expect = 6.5e-05
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 1 

Query: 72  RNEGSRGGRGSGRGGGRGYGYGRGREG-GGFNRDSTNNEN 111
           +++G  GGRG  RGG  GYG GRGR G GG +RD  +N+N
Sbjct: 364 KSDGYGGGRGGYRGGRGGYGRGRGRMGNGGRSRDGASNQN 403


HSP 5 Score: 42.7 bits (99), Expect = 5.5e-04
Identity = 28/79 (35.44%), Postives = 30/79 (37.97%), Query Frame = 1 

Query: 72  RNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGYGGP 131
           R +G  GGR  G GGG+  GYG GR                      GG    R GYG  
Sbjct: 348 RRDGYGGGRYDGYGGGKSDGYGGGR----------------------GGYRGGRGGYGRG 404

Query: 132 RGRGGRRGGFNDGEGAEGE 151
           RGR G  G   DG   + E
Sbjct: 408 RGRMGNGGRSRDGASNQNE 404

[Close]
BLAST of Csa6G106180 vs. TAIR10
Match: AT1G31290.1 (AT1G31290.1 ARGONAUTE 3)

HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09
Identity = 55/174 (31.61%), Postives = 63/174 (36.21%), Query Frame = 1 

Query: 75  GSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGGKTSERRGY------ 134
           G RGGRG GRG G G   GRG  G G               DG G      RGY      
Sbjct: 5   GYRGGRGDGRGRGGGGDRGRGYSGRG---------------DGRGRGGDGDRGYSGRGDG 64

Query: 135 -----GGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGRSTD 194
                GG RGRG    G   G G  G+R R    R  G GRG    R   GRG  GR   
Sbjct: 65  HGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRGDGHGRGGGGDR---GRGYSGRGRG 124

Query: 195 EFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 238
              +  G  VN  + + G  +        G  T+     PQE  P   +  + +
Sbjct: 125 FVQDRDGGWVNPGQSSGGHVR--------GRGTQLQQPPPQEVPPSSSQAQVSQ 152


HSP 2 Score: 29.6 bits (65), Expect = 4.8e+00
Identity = 17/30 (56.67%), Postives = 17/30 (56.67%), Query Frame = 1 

Query: 311 RPADGERHYAPGGRGRGR-GRGSRG-GYSG 339
           R  DG+R Y+  G G GR G G RG GYSG
Sbjct: 35  RGGDGDRGYSGRGDGHGRGGGGDRGRGYSG 64

[Close]
BLAST of Csa6G106180 vs. NCBI nr
Match: gi|449445497|ref|XP_004140509.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis sativus])

HSP 1 Score: 734.2 bits (1894), Expect = 1.1e-208
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK
Sbjct: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120

Query: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240
           STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300
           LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT
Sbjct: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300

Query: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360
           KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA
Sbjct: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]
BLAST of Csa6G106180 vs. NCBI nr
Match: gi|659119706|ref|XP_008459799.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 696.0 bits (1795), Expect = 3.4e-197
Identity = 341/361 (94.46%), Postives = 350/361 (96.95%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M TLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKK PAQTKPLPSGAQ NKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENINAPEDGVGG 120
           PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDS N+ENINAPEDGVGG
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTSERRGYGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180
           KT+ERRGYGGPRGRGGRRGGFNDGE AEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR
Sbjct: 121 KTTERRGYGGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWGR 180

Query: 181 STDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEEYEK 240
           STDEFAEVA ETVNETEKNVGDEKPIQE+DTSG NT++PAKEP+ETEPEDKEMTLEEYEK
Sbjct: 181 STDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYEK 240

Query: 241 LLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKEERT 300
           LLEDKRK+LLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKE+ADKEERT
Sbjct: 241 LLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEIADKEERT 300

Query: 301 KKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGYSGSPMSNVAAPSIGDPGQFPTLGA 360
           KKSLSINEFLRPA+GERHY PGGRGRGRGRGSRGGYSGS MSNVAAPSI DPGQFP LGA
Sbjct: 301 KKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPILGA 360

Query: 361 K 362
           K
Sbjct: 361 K 361

[Close]
BLAST of Csa6G106180 vs. NCBI nr
Match: gi|659119708|ref|XP_008459800.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 3.6e-151
Identity = 280/367 (76.29%), Postives = 310/367 (84.47%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKP-LPSGAQLNKPASLPS 60
           M T NPFDLLGDDDAEDPSQL+A K AA A AP       Q K    + A+LNKPA+LPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 61  KPLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI--NAPEDG 120
           KPLPPAQAVRE++NEG RGGRGSGRGGG G GYGRGR  GGFNR++ NNE    + PEDG
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGG-GRGYGRGRGSGGFNREAANNEYSFSSNPEDG 120

Query: 121 VGGKTSERRG-YGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRG 180
             G+T+E+RG YGGPRGRGGRRGGF +G+  +GERPR  FERHSGTGRGNEFKREGSGRG
Sbjct: 121 ETGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKREGSGRG 180

Query: 181 NWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLE 240
           NWGRSTDEF EVA E  NE++K +GDEKP+ ED T+GVNTEN AKE +E EPEDKEMTLE
Sbjct: 181 NWGRSTDEFPEVA-EEANESQK-LGDEKPVHEDGTAGVNTENTAKESEEKEPEDKEMTLE 240

Query: 241 EYEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADK 300
           EYEKLLE+KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N D+FIKLGS+KDKRKE+ADK
Sbjct: 241 EYEKLLEEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDVFIKLGSDKDKRKEIADK 300

Query: 301 EERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGG--YSGSPMSNVAAPSIGDPGQ 360
           EERTKKS+SINEFL+PADGERHY PGGRGRGRGRGSRGG   S S  SNVAAPSI DPGQ
Sbjct: 301 EERTKKSVSINEFLKPADGERHYTPGGRGRGRGRGSRGGGYVSSSMSSNVAAPSIEDPGQ 360

Query: 361 FPTLGAK 362
           FPTLGAK
Sbjct: 361 FPTLGAK 364

[Close]
BLAST of Csa6G106180 vs. NCBI nr
Match: gi|449466564|ref|XP_004150996.1| (PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus])

HSP 1 Score: 533.1 bits (1372), Expect = 3.8e-148
Identity = 277/366 (75.68%), Postives = 310/366 (84.70%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKAPAQTKPLPSGAQLNKPASLPSK 60
           M T NPFDLLGDDDAEDPSQL+A K AA A    S   P   +   + A+L+KPA+LPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAPKKGSDH-PQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSTNNENI--NAPEDGV 120
           PLPPAQAVRE++NEG RGGR SGRGG    GYGRGR  GGFNR+S NNE    + PEDG 
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGRGGR---GYGRGRGSGGFNRESPNNEYSFSSNPEDGE 120

Query: 121 GGKTSERRG-YGGPRGRGGRRGGFNDGEGAEGERPRRAFERHSGTGRGNEFKREGSGRGN 180
            G+T+E+RG YGGPRGRGGRRGGF +G+ A+GERPR AFERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQETEPEDKEMTLEE 240
           WGRS +EF EVA E  NE++K +GDEKP+ EDDT+GVNTENPAKE +E EPEDKEMTLEE
Sbjct: 181 WGRSAEEFPEVA-EEANESQK-LGDEKPVHEDDTAGVNTENPAKESEEKEPEDKEMTLEE 240

Query: 241 YEKLLEDKRKALLALKTEERKVDPKEFASMQQLSSKKDNNDIFIKLGSEKDKRKEMADKE 300
           YEKLL++KRK+LLALKTEERKVDPKEFAS+QQLSSKK+N DIFIKLGS+KDKRKE ADKE
Sbjct: 241 YEKLLDEKRKSLLALKTEERKVDPKEFASLQQLSSKKENQDIFIKLGSDKDKRKETADKE 300

Query: 301 ERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSR-GGYSGSPM-SNVAAPSIGDPGQF 360
           ERTKKS+SINEFL+PA+GE+HY PGGRGRGRGRGSR GGY GS M SNVAAPSI DPGQF
Sbjct: 301 ERTKKSVSINEFLKPAEGEKHYTPGGRGRGRGRGSRGGGYVGSSMSSNVAAPSIEDPGQF 360

Query: 361 PTLGAK 362
           PTLGAK
Sbjct: 361 PTLGAK 360

[Close]
BLAST of Csa6G106180 vs. NCBI nr
Match: gi|731420480|ref|XP_010661405.1| (PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera])

HSP 1 Score: 486.9 bits (1252), Expect = 3.1e-134
Identity = 260/377 (68.97%), Postives = 288/377 (76.39%), Query Frame = 1 

Query: 1   MTTLNPFDLLGDDDAEDPSQLIAAK--VAAVATAPLSKKAPAQTKPLPSGAQLNKPASLP 60
           M T+NPFDLLGDDD+EDPSQLIAA+  V   A AP    APAQ           KPA LP
Sbjct: 1   MATMNPFDLLGDDDSEDPSQLIAAQKIVPKKALAPTQAAAPAQQA---------KPAKLP 60

Query: 61  SKPLPPAQAVRESRNEGSRGGRGSGRGGGRG-YGYGRGREGGGFNRDSTNNENI------ 120
           SKP+PPAQAVRE +NE       SGRGGGRG  GYGRGR GGGFNRD  NNEN       
Sbjct: 61  SKPVPPAQAVREGKNE-------SGRGGGRGGRGYGRGRGGGGFNRDYANNENSFSNMGV 120

Query: 121 ----NAPEDGVGGKTSERRGYGGPRGR-GGRRGGFNDGEGAEGERPRRAFERHSGTGRGN 180
                APEDG GGK SERR YGGPR    GRRGGF++GE  +G+RPRRAFER SGTGRGN
Sbjct: 121 AGGQGAPEDGEGGKPSERRNYGGPRPPFRGRRGGFSNGEAGDGDRPRRAFERRSGTGRGN 180

Query: 181 EFKREGSGRGNWGRSTDEFAEVAGETVNETEKNVGDEKPIQEDDTSGVNTENPAKEPQET 240
           E KREGSGRGNWG  TDE + V  E VNE EKN+G EKP+ E+D +  N ENP  EP+E 
Sbjct: 181 ELKREGSGRGNWGTETDELSGVTEEVVNEGEKNLGAEKPVGEEDVADGNKENPVNEPEEK 240

Query: 241 EPEDKEMTLEEYEKLLEDKRKALLALKTEERKVD-PKEFASMQQLSSKKDNNDIFIKLGS 300
           EPE+KEMTLEEYEK+LE++RKAL  LKTEERKVD  KEF SMQQLSSKK N+DIFIKLGS
Sbjct: 241 EPEEKEMTLEEYEKVLEERRKALQTLKTEERKVDVDKEFKSMQQLSSKKGNDDIFIKLGS 300

Query: 301 EKDKRKEMADKEERTKKSLSINEFLRPADGERHYAPGGRGRGRGRGSRGGY-SGSPMSNV 360
           +KDKRKE A+KEER KK++SINEFL+PA+GER Y+PGGRGRGRGRGSRGGY  G+ MSNV
Sbjct: 301 DKDKRKEAAEKEERAKKAVSINEFLKPAEGERFYSPGGRGRGRGRGSRGGYGGGNAMSNV 360

Query: 361 AAPSIGDPGQFPTLGAK 362
           AAPSI DPGQFPTLGAK
Sbjct: 361 AAPSIEDPGQFPTLGAK 361

The following BLAST results are available for this feature:
BLAST of Csa6G106180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGO2_ORYSJ1.5e-0842.24Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2[more]
RBP56_HUMAN5.9e-0834.81TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15 PE=1 SV=1[more]
FBRL_DROME7.7e-0839.50rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=2 S... [more]
AGO3_ARATH1.3e-0731.61Protein argonaute 3 OS=Arabidopsis thaliana GN=AGO3 PE=3 SV=1[more]
IF2_SACEN2.2e-0735.66Translation initiation factor IF-2 OS=Saccharopolyspora erythraea (strain ATCC 1... [more]
BLAST of Csa6G106180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Z4_CUCSA7.8e-209100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106180 PE=4 SV=1[more]
A0A0A0KCI2_CUCSA2.6e-14875.68Uncharacterized protein OS=Cucumis sativus GN=Csa_6G105680 PE=4 SV=1[more]
D7SLZ5_VITVI2.2e-13468.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01420 PE=4 SV=... [more]
M5X0A0_PRUPE1.8e-13368.80Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007410mg PE=4 SV=1[more]
A0A151RAW5_CAJCA5.0e-13166.58Uncharacterized protein OS=Cajanus cajan GN=KK1_038893 PE=4 SV=1[more]
BLAST of Csa6G106180 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16830.13.1e-9255.15 Hyaluronan / mRNA binding family[more]
AT4G17520.19.7e-8649.48 Hyaluronan / mRNA binding family[more]
AT5G47210.13.2e-8150.53 Hyaluronan / mRNA binding family[more]
AT3G07030.15.6e-0939.45 Alba DNA/RNA-binding protein[more]
AT1G31290.17.4e-0931.61 ARGONAUTE 3[more]
BLAST of Csa6G106180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445497|ref|XP_004140509.1|1.1e-208100.00PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis s... [more]
gi|659119706|ref|XP_008459799.1|3.4e-19794.46PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m... [more]
gi|659119708|ref|XP_008459800.1|3.6e-15176.29PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cucumis m... [more]
gi|449466564|ref|XP_004150996.1|3.8e-14875.68PREDICTED: cyclin-dependent kinase 13-like [Cucumis sativus][more]
gi|731420480|ref|XP_010661405.1|3.1e-13468.97PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006861HABP4_PAIRBP1-bd
IPR019084Stm1-like_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087513cucumber EST collection version 3.0transcribed_cluster
CU094538cucumber EST collection version 3.0transcribed_cluster
CU096219cucumber EST collection version 3.0transcribed_cluster
CU103116cucumber EST collection version 3.0transcribed_cluster
CU120909cucumber EST collection version 3.0transcribed_cluster
CU144065cucumber EST collection version 3.0transcribed_cluster
CU169660cucumber EST collection version 3.0transcribed_cluster
CU169846cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G106180.1Csa6G106180.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU169660CU169660transcribed_cluster
CU096219CU096219transcribed_cluster
CU169846CU169846transcribed_cluster
CU144065CU144065transcribed_cluster
CU120909CU120909transcribed_cluster
CU094538CU094538transcribed_cluster
CU103116CU103116transcribed_cluster
CU087513CU087513transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006861Hyaluronan/mRNA-binding proteinPFAMPF04774HABP4_PAI-RBP1coord: 152..259
score: 7.0
IPR006861Hyaluronan/mRNA-binding proteinSMARTSM01233HABP4_PAI_RBP1_2coord: 152..260
score: 7.8
IPR019084Stm1, N-terminalPFAMPF09598Stm1_Ncoord: 1..81
score: 8.7
NoneNo IPR availableunknownCoilCoilcoord: 235..258
scor
NoneNo IPR availablePANTHERPTHR12299HYALURONIC ACID-BINDING PROTEIN 4coord: 1..361
score: 8.5E
NoneNo IPR availablePANTHERPTHR12299:SF24SUBFAMILY NOT NAMEDcoord: 1..361
score: 8.5E