Csa6G087840 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G087840
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionE3 ubiquitin ligase; contains IPR004162 (Seven-in-absentia protein, sina), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr6 : 5832306 .. 5835282 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTTCTCCTCATTTCTCTAATCTCAACCACCCATTTCATCTCTTTGATCATCCATTTTCATTCCTTTCTTCATTCATTCTTCACTTTTTCTCGATACCCTTTTCATTTCTATCCCCAATTCGCCGGTTTTCATGGCGAATACCTCTTCCCCTTCAAAACCCATCATCACATTTTGATTCTCTCTCGATTTAATTAATACCCAGTTGGATAGGTCTTTGTTTGTTCTGCAAAAATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGGTTCCTTTCCCCCAACCCTCTTTTTCTTTTCTTCAATCACTGTTTTGATCCGTTTCTGCTTTCTGTTTTCTGATCTATTTCGTATTGTGGGTCTGTTGTTAGAGGTTCTTGAGATTCTTCTCCTCCATTGGGCCTTTGGTTTTCTCGATCGATCGGTTCTTGTAATGATTATTTTTATAGTTATTTGCATTTTCATTTGCCTTTGCCTTTGTGGAGATTTCTAATCTTTGTGAGTCTAAATTGTTTGCTAAAGCCCTGCCCTTCAATATACTCATAATCATCAAAATGAAGAGCCATTTTGTTGTGTTGCTATCATTTGTTGTGGTTTAGTCAACTTTGTTCAGAAACTGAAATCATGTTCCAATTGTGGCTCTTTTTTAGGTTAGTTTAATTAATACATGGAGGGGAAAATCTGGGATCTCTTTCTCATATTATCTTAAATATCATCAATTGGGGAAGTGGGAATCCTATGTTTGACCTTTAGAACGACTATCTTAGCGCTGCAAGATCAGGCTTGCATAGGGCAGGTGAATGGAATGGTGAAGGTGAAATTTGAAAAGAATCTACTTCATTGTTTTACCTTCCCCGTTCCAAATCGAGTTCTCAGTGGTACTTGCAGGCTGGAATGGCTAGAATATAGGATTCTCTTGGACTCACAATGCTGGGATCATCTCTTTTTCTATTTCAATTTAGATTGAATATTGTCAAAGGTTTTGCTCTAAATCAATGCTCAGATCATCTCTTTTGCTTATAGCATACGGTTTCATAAGCGAGTTAGAAGGTTGAGGCACTTAGGATAGGCATTGGACATGGTAAATAGATGGTTGTATTTTTCAATACAGCATCATAAAGTTGAGTAATTGATCTAATATTCTGTTTGATTTCTTGTTGACTATGTGGTGCTATGCAACGATGTTAGTTTTGCATTAGGTTAGTACAAACGACAGGTCTCGTTTCTTCTTGTTTGATGTTAGTAACCAATTCCTAAAATTATACTTGTTCTTAAAACATTTTCAATAAAAGTGGTTGTAAAATTAACTTGCTTATGGGTGTGGTTACATTTTCTAAATTTTTAGTCACAAGTTTGTCTGGTCGCATCACATCTCAAAGTTTACAAGTGTTAAATTACAATATTGATTTTATATGATTCTCAGCCAATAACTTTAGAAATCATTTTTGCATAATCTACATCAAGTGTTTCTGGAAAAATATTCTAAAATCATTTTTGAATTTCTTAAATGTGACGTTTATTTTCATCCAAAATCACTTGGGAACTTATGTCAAACTCAATCTTAGAACTCCTGGACGATTTTTGAATACTCCCTTCTTGGCTTTGGCTGGATATAGATGTTTATGTGTATGTGTGTATGTCTATTTAACACTATCACGTAGGAATGTCTTGTCTATTTTGGTATTCGCACCACGATATGTGTGGATTCTTCGAAAGGACAAAACAACTAATTCGTCAATCTTGTGAAATCTCTAGCGTTAAATGATATTGAATCTTCATGAATGAATTTCGGGTAATGACTATCCAGTTTGGGATAGTTGACGAGAAGAAATTGCTGAATGTTTTGAACTTTTTGTTTTGTTTGTGCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTACGTATCCATTCAACATGATCGAACAGTCGTGGGTGACAATATTCAAGATTATTTTTCACTTATAATGAGCTTCTATTTATGCTCTTATTTCACCTTTGGCTCAGGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAAACTTGTTAGAGATTCAACTCTTTATGTATTTGACTGTAATGCATAACATTTGCTTCAACTTTATCCACCAGAAGCCAATCTTGAATCAGTTCATATCTATTCTTCAAATCTAACAGG

mRNA sequence

ATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Coding sequence (CDS)

ATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Protein sequence

MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ*
Homology
[Close]
BLAST of Csa6G087840 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 8.7e-146
Identity = 240/314 (76.43%), Postives = 267/314 (85.03%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD +D   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDM 180
            CK  + GC EI PYYSKLKHE+ C +RPY+CPYAGS+C + G+IPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARN++YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of Csa6G087840 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 478.4 bits (1230), Expect = 5.8e-134
Identity = 222/291 (76.29%), Postives = 249/291 (85.57%), Query Frame = 1 

Query: 11  SMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNG 70
           S+D + ++D+  Q+H QF S              TSV+ELLECPVCTNSMYPPIHQC NG
Sbjct: 5   SIDSVIDDDEIHQKH-QFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNG 64

Query: 71  HTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKH 130
           HTLCS+CK+RV NRCPTCRQELGDIRCLALEK+AESL+L CK+   GC  I PYYSKLKH
Sbjct: 65  HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKH 124

Query: 131 ESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENA 190
           ES C +RPY+CPYAGS+C   G+I FLV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA
Sbjct: 125 ESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENA 184

Query: 191 TWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIW 250
           TWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE DARN++YSLEVGG+GRK  W
Sbjct: 185 TWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTW 244

Query: 251 EGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           EG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 245 EGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]
BLAST of Csa6G087840 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.3e-133
Identity = 217/258 (84.11%), Postives = 237/258 (91.86%), Query Frame = 1 

Query: 45  TSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIA 104
           TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+A
Sbjct: 56  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 115

Query: 105 ESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDD 164
           ESL+L CKF   GC EI PYYSKLKHES C +RPY+CPYAGS+C I G+IPFLV+HLRDD
Sbjct: 116 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 175

Query: 165 HKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 224
           HKVDMH+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 176 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 235

Query: 225 FMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGG 284
           FMGDE DAR++SYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG
Sbjct: 236 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 295

Query: 285 ERKELKLRITGRIWKEQN 303
           +RKELKLR+TG+IWKEQ+
Sbjct: 296 DRKELKLRVTGKIWKEQH 313

[Close]
BLAST of Csa6G087840 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.9e-125
Identity = 206/290 (71.03%), Postives = 236/290 (81.38%), Query Frame = 1 

Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C +RPYTCPYAGS+C + G+IP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ FSYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of Csa6G087840 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.0e-123
Identity = 195/259 (75.29%), Postives = 225/259 (86.87%), Query Frame = 1 

Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLR 162
           +AESL++ C++   GCQ+I PYYSKLKHE  C +R Y+CPYAGS+C + G+IP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ FSYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]
BLAST of Csa6G087840 vs. TrEMBL
Match: A0A067H6D5_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.4e-147
Identity = 248/310 (80.00%), Postives = 271/310 (87.42%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  I+ +PS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHS 180
           K+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARN++YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of Csa6G087840 vs. TrEMBL
Match: V4U1Z4_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.4e-147
Identity = 248/310 (80.00%), Postives = 271/310 (87.42%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  I+ +PS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHS 180
           K+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARN++YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of Csa6G087840 vs. TrEMBL
Match: M5XLI4_PRUPE (E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 2.5e-147
Identity = 244/301 (81.06%), Postives = 270/301 (89.70%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGI+ + S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+ + GC E
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C +RPY CPYAGSDC   G+IPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARN++YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]
BLAST of Csa6G087840 vs. TrEMBL
Match: A9PEZ7_POPTR (E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 2.7e-146
Identity = 247/316 (78.16%), Postives = 272/316 (86.08%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQ-FPSISKPRI-----NNNDNPT---------TT 60
           MELD I+ +PS+D+ DE++     H   FPS+SKP       NNN N           TT
Sbjct: 1   MELDSIECVPSLDLTDEDEIHHHHHLHHFPSVSKPHTTTTTNNNNSNSNSNTVASAIHTT 60

Query: 61  SVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAE 120
           SVHELLECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AE
Sbjct: 61  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAE 120

Query: 121 SLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDH 180
           SL+L CK+ + GC EI PYYSKLKHE+ C +RPY+CPYAGS+C I G+IPFLV+HLRDDH
Sbjct: 121 SLELPCKYMSLGCPEIFPYYSKLKHETLCNFRPYSCPYAGSECAIVGDIPFLVAHLRDDH 180

Query: 181 KVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240
           KVDMHSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 241 MGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGE 300
           MGDE +ARN+SYSLEVGGNGRKLIWEG PRSIRD+H+KVRDSHDGLIIQRNMALFFSGG+
Sbjct: 241 MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 300

Query: 301 RKELKLRITGRIWKEQ 302
           RKELKLR+TGRIWKEQ
Sbjct: 301 RKELKLRVTGRIWKEQ 316

[Close]
BLAST of Csa6G087840 vs. TrEMBL
Match: B9I8Y6_POPTR (E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0014s09470g PE=3 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 6.0e-146
Identity = 247/316 (78.16%), Postives = 273/316 (86.39%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQ-FPSISKPRI------NNNDNPT--------TT 60
           MELD I+ +PS D+ DE++     H   FPS+SKP        NNN+N T        +T
Sbjct: 1   MELDSIECVPSSDLTDEDEIHHHHHLHHFPSVSKPHTTTTTTNNNNNNNTNTVASSFHST 60

Query: 61  SVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAE 120
           SVHELLECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AE
Sbjct: 61  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAE 120

Query: 121 SLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDH 180
           SL+L CK+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDH
Sbjct: 121 SLELPCKYMSLGCPEIFPYYSKLKHENLCNFRPYNCPYAGSECVIVGDIPFLVTHLRDDH 180

Query: 181 KVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240
           KVDMHSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 241 MGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGE 300
           MGDET+ARN+SYSLEVGGNGRKLIWEG PRSIRD+H+KVRDSHDGL+IQRNMALFFSGG+
Sbjct: 241 MGDETEARNYSYSLEVGGNGRKLIWEGMPRSIRDSHRKVRDSHDGLVIQRNMALFFSGGD 300

Query: 301 RKELKLRITGRIWKEQ 302
           RKELKLR+TGRIWKEQ
Sbjct: 301 RKELKLRVTGRIWKEQ 316

[Close]
BLAST of Csa6G087840 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 517.7 bits (1332), Expect = 4.9e-147
Identity = 240/314 (76.43%), Postives = 267/314 (85.03%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN-----------PTTTSVHE 60
           M+LD +D   +MDV D+E+    RH  + S+SK    NN+            PTTTSVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDM 180
            CK  + GC EI PYYSKLKHE+ C +RPY+CPYAGS+C + G+IPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARN++YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of Csa6G087840 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 477.2 bits (1227), Expect = 7.3e-135
Identity = 217/258 (84.11%), Postives = 237/258 (91.86%), Query Frame = 1 

Query: 45  TSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIA 104
           TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+A
Sbjct: 56  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 115

Query: 105 ESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDD 164
           ESL+L CKF   GC EI PYYSKLKHES C +RPY+CPYAGS+C I G+IPFLV+HLRDD
Sbjct: 116 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 175

Query: 165 HKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 224
           HKVDMH+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 176 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 235

Query: 225 FMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGG 284
           FMGDE DAR++SYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG
Sbjct: 236 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 295

Query: 285 ERKELKLRITGRIWKEQN 303
           +RKELKLR+TG+IWKEQ+
Sbjct: 296 DRKELKLRVTGKIWKEQH 313

[Close]
BLAST of Csa6G087840 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 448.7 bits (1153), Expect = 2.8e-126
Identity = 206/290 (71.03%), Postives = 236/290 (81.38%), Query Frame = 1 

Query: 15  MDEEDKTLQRHCQFPSISKPR---INNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C +RPYTCPYAGS+C + G+IP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ FSYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of Csa6G087840 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-124
Identity = 195/259 (75.29%), Postives = 225/259 (86.87%), Query Frame = 1 

Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLR 162
           +AESL++ C++   GCQ+I PYYSKLKHE  C +R Y+CPYAGS+C + G+IP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ FSYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]
BLAST of Csa6G087840 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-101
Identity = 165/204 (80.88%), Postives = 183/204 (89.71%), Query Frame = 1 

Query: 98  LALEKIAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFL 157
           +ALEK+AESL+L CK+   GC  I PYYSKLKHES C +RPY+CPYAGS+C   G+I FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 158 VSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 217
           V+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 218 VYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNM 277
           VYMAFLRFMGDE DARN++YSLEVGG+GRK  WEG PRS+RD+H+KVRDSHDGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 278 ALFFSGGERKELKLRITGRIWKEQ 302
           ALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]
BLAST of Csa6G087840 vs. NCBI nr
Match: gi|449445654|ref|XP_004140587.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus])

HSP 1 Score: 656.4 bits (1692), Expect = 2.5e-185
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of Csa6G087840 vs. NCBI nr
Match: gi|659120058|ref|XP_008459990.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo])

HSP 1 Score: 654.8 bits (1688), Expect = 7.3e-185
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of Csa6G087840 vs. NCBI nr
Match: gi|1009142384|ref|XP_015888695.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Ziziphus jujuba])

HSP 1 Score: 532.3 bits (1370), Expect = 5.4e-148
Identity = 247/301 (82.06%), Postives = 269/301 (89.37%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME D I+ +P  DVMDE D+   R  QF ++SKP  N N N +TTSVHELLECPVCTNSM
Sbjct: 1   MESDCIETVPPSDVMDE-DEIQGRPLQFLTVSKPLSNTNSNSSTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQC NGHTLCS+CKT V NRCPTCRQELGDIRCLALEK+AESL+L CK+ + GC E
Sbjct: 61  YPPIHQCHNGHTLCSTCKTMVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCSE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHES C +RPY CPYAGSDC + G+IPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHESLCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQL MAPVYMAFLRFMGDET+ARN+SYSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLEMAPVYMAFLRFMGDETEARNYSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+H+KVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

[Close]
BLAST of Csa6G087840 vs. NCBI nr
Match: gi|567904694|ref|XP_006444835.1| (hypothetical protein CICLE_v10021159mg [Citrus clementina])

HSP 1 Score: 530.4 bits (1365), Expect = 2.1e-147
Identity = 248/310 (80.00%), Postives = 271/310 (87.42%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDN---------PTTTSVHELL 60
           MEL  I+ +PS D+ DE++    R  QFPSISKP  N N+N         P TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHS 180
           K+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARN++YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of Csa6G087840 vs. NCBI nr
Match: gi|645254666|ref|XP_008233142.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X1 [Prunus mume])

HSP 1 Score: 529.6 bits (1363), Expect = 3.5e-147
Identity = 244/301 (81.06%), Postives = 270/301 (89.70%), Query Frame = 1 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           ME DGI+ + S+D+MDE++   + H  F S+ KP  N+ + P TTSVHELLECPVCTNSM
Sbjct: 1   MESDGIESVTSLDLMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L CK+ + GC E
Sbjct: 61  YPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           I PYYSKLKHE+ C +RPY CPYAGSDC   G+IPFLV+HLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 IFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           K+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET+ARN++YSLE
Sbjct: 181 KSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 300

Query: 301 Q 302
           Q
Sbjct: 301 Q 300

The following BLAST results are available for this feature:
BLAST of Csa6G087840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SINA3_ARATH8.7e-14676.43E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1[more]
SINA5_ARATH5.8e-13476.29E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2[more]
SINA4_ARATH1.3e-13384.11E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1[more]
SINA2_ARATH4.9e-12571.03E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1[more]
SINA1_ARATH6.0e-12375.29Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE... [more]
BLAST of Csa6G087840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067H6D5_CITSI1.4e-14780.00E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1[more]
V4U1Z4_9ROSI1.4e-14780.00E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1[more]
M5XLI4_PRUPE2.5e-14781.06E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1[more]
A9PEZ7_POPTR2.7e-14678.16E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0002s17250g PE=2 SV=... [more]
B9I8Y6_POPTR6.0e-14678.16E3 ubiquitin-protein ligase OS=Populus trichocarpa GN=POPTR_0014s09470g PE=3 SV=... [more]
BLAST of Csa6G087840 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61790.14.9e-14776.43 Protein with RING/U-box and TRAF-like domains[more]
AT4G27880.17.3e-13584.11 Protein with RING/U-box and TRAF-like domains[more]
AT3G58040.12.8e-12671.03 seven in absentia of Arabidopsis 2[more]
AT2G41980.13.4e-12475.29 Protein with RING/U-box and TRAF-like domains[more]
AT5G53360.15.3e-10180.88 TRAF-like superfamily protein[more]
BLAST of Csa6G087840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445654|ref|XP_004140587.1|2.5e-185100.00PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus][more]
gi|659120058|ref|XP_008459990.1|7.3e-18599.67PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo][more]
gi|1009142384|ref|XP_015888695.1|5.4e-14882.06PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Ziziphus jujuba][more]
gi|567904694|ref|XP_006444835.1|2.1e-14780.00hypothetical protein CICLE_v10021159mg [Citrus clementina][more]
gi|645254666|ref|XP_008233142.1|3.5e-14781.06PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR004162SINA-like
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR013083Znf_RING/FYVE/PHD
IPR013323SIAH-type domain
IPR0181217-in-absentia-prot_TRAF-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007275multicellular organism development
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095889cucumber EST collection version 3.0transcribed_cluster
CU098095cucumber EST collection version 3.0transcribed_cluster
CU115558cucumber EST collection version 3.0transcribed_cluster
CU149438cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G087840.1Csa6G087840.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU095889CU095889transcribed_cluster
CU115558CU115558transcribed_cluster
CU098095CU098095transcribed_cluster
CU149438CU149438transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 53..89
score: 9
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 11..304
score: 1.8E
IPR008974TRAF-likeGENE3DG3DSA:2.60.210.10coord: 171..298
score: 1.8
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 106..298
score: 5.69
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 106..166
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 39..118
score: 5.7
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 119..161
score: 2.1
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 95..294
score: 6.4
NoneNo IPR availablePANTHERPTHR10315:SF34E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATEDcoord: 11..304
score: 1.8E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 47..111
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G087840Cla007049Watermelon (97103) v1cuwmB537
Csa6G087840MELO3C022407Melon (DHL92) v3.5.1cumeB442
Csa6G087840ClCG06G001270Watermelon (Charleston Gray)cuwcgB476
Csa6G087840Lsi09G018130Bottle gourd (USVL1VR-Ls)culsiB402
Csa6G087840MELO3C022407.2Melon (DHL92) v3.6.1cumedB422
Csa6G087840Cla97C06G110530Watermelon (97103) v2cuwmbB468
Csa6G087840Bhi12G002068Wax gourdcuwgoB533
Csa6G087840CSPI06G06850Wild cucumber (PI 183967)cpicuB314
Csa6G087840Cucsa.348720Cucumber (Gy14) v1cgycuB490
Csa6G087840CsGy6G006860Cucumber (Gy14) v2cgybcuB282
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G087840Cucurbita maxima (Rimu)cmacuB908
Csa6G087840Cucurbita pepo (Zucchini)cpecuB327