CsGy6G006860 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G006860
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionE3 ubiquitin-protein ligase
LocationChr6 : 5894790 .. 5897913 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTCATTTATAACCGATCCACATCGACATCTCTGTCCCTCGTATCGACCTATCAGAAATTTTGGAATGAAAAAGGGAAAGAAAAAACTTCCATTATTAACTAATCTCTCCTTCTAAATCCTCCTTCCTTCTTCTTTCTCCTCATTTCTCTAATCTCAACCACCCATTTCATCTCTTTGATCATCCATTTTCATTCCTTTCTTCATTCATTCTTCACTTTTTCTCGATACCCTTTTCATTTCTATCCCCAATTCGCCGGTTTTCATGGCGAATACCTCTTCCCCTTCAAAACCCATCATCACATTTTGATTCTCTCTCGATTTAATTAATACCCAGTTGGATAGGTCTTTGTTTGTTCTGCAAAAATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGGTTCCTTTCCCCCAACCCTCTTTTTCTTTTCTTCAATCACTGTTTTGATCCGTTTCTGCTTTCTGTTTTCTGATCTATTTCGTATTGTGGGTCTGTTGTTAGAGGTTCTTGAGATTCTTCTCCTCCATTGGGCCTTTGGTTTTCTCGATCGATCGGTTCTTGTAATGATTATTTTTATAGTTATTTGCATTTTCATTTGCCTTTGCCTTTGTGGAGATTTCTAATCTTTGTGAGTCTAAATTGTTTGCTAAAGCCCTGCCCTTCAATATACTCATAATCATCAAAATGAAGAGCCATTTTGTTGTGTTGCTATCATTTGTTGTGGTTTAGTCAACTTTGTTCAGAAACTGAAATCATGTTCCAATTGTGGCTCTTTTTTAGGTTAGTTTAATTAATACATGGAGGGGAAAATCTGGGATCTCTTTCTCATATTATCTTAAATATCATCAATTGGGGAAGTGGGAATCCTATGTTTGACCTTTAGAACGACTATCTTAGCGCTGCAAGATCAGGCTTGCATAGGGCAGGTGAATGGAATGGTGAAGGTGAAATTTGAAAAGAATCTACTTCATTGTTTTACCTTCCCCGTTCCAAATCGAGTTCTCAGTGGTACTTGCAGGCTGGAATGGCTAGAATATAGGATTCTCTTGGACTCACAATGCTGGGATCATCTCTTTTTCTATTTCAATTTAGATTGAATATTGTCAAAGGTTTTGCTCTAAATCAATGCTCAGATCATCTCTTTTGCTTATAGCATACGGTTTCATAAGCGAGTTAGAAGGTTGAGGCACTTAGGATAGGCATTGGACATGGTAAATAGATGGTTGTATTTTTCAATACAGCATCATAAAGTTGAGTAATTGATCTAATATTCTGTTTGATTTCTTGTTGACTATGTGGTGCTATGCAACGATGTTAGTTTTGCATTAGGTTAGTACAAACGACAGGTCTCGTTTCTTCTTGTTTGATGTTAGTAACCAATTCCTAAAATTATACTTGTTCTTAAAACATTTTCAATAAAAGTGGTTGTAAAATTAACTTGCTTATGGGTGTGGTTACATTTTCTAAATTTTTAGTCACAAGTTTGTCTGGTCGCATCACATCTCAAAGTTTACAAGTGTTAAATTACAATATTGATTTTATATGATTCTCAGCCAATAACTTTAGAAATCATTTTTGCATAATCTACATCAAGTGTTTCTGGAAAAATATTCTAAAATCATTTTTGAATTTCTTAAATGTGACGTTTATTTTCATCCAAAATCACTTGGGAACTTATGTCAAACTCAATCTTAGAACTCCTGGACGATTTTTGAATACTCCCTTCTTGGCTTTGGCTGGATATAGATGTTTATGTGTATGTGTGTATGTCTATTTAACACTATCACGTAGGAATGTCTTGTCTATTTTGGTATTCGCACCACGATATGTGTGGATTCTTCGAAAGGACAAAACAACTAATTCGTCAATCTTGTGAAATCTCTAGCGTTAAATGATATTGAATCTTCATGAATGAATTTCGGGTAATGACTATCCAGTTTGGGATAGTTGACGAGAAGAAATTGCTGAATGTTTTGAACTTTTTGTTTTGTTTGTGCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTACGTATCCATTCAACATGATCGAACAGTCGTGGGTGACAATATTCAAGATTATTTTTCACTTATAATGAGCTTCTATTTATGCTCTTATTTCACCTTTGGCTCAGGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAAACTTGTTAGAGATTCAACTCTTTATGTATTTGACTGTAATGCATAACATTTGCTTCAACTTTATCCACCAGAAGCCAATCTTGAATCAGTTCATATCTATTCTTCAAATCTAACAGGAAGAAGAAAAAAAAAAA

mRNA sequence

CTTTCTTCATTTATAACCGATCCACATCGACATCTCTGTCCCTCGTATCGACCTATCAGAAATTTTGGAATGAAAAAGGGAAAGAAAAAACTTCCATTATTAACTAATCTCTCCTTCTAAATCCTCCTTCCTTCTTCTTTCTCCTCATTTCTCTAATCTCAACCACCCATTTCATCTCTTTGATCATCCATTTTCATTCCTTTCTTCATTCATTCTTCACTTTTTCTCGATACCCTTTTCATTTCTATCCCCAATTCGCCGGTTTTCATGGCGAATACCTCTTCCCCTTCAAAACCCATCATCACATTTTGATTCTCTCTCGATTTAATTAATACCCAGTTGGATAGGTCTTTGTTTGTTCTGCAAAAATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAAACTTGTTAGAGATTCAACTCTTTATGTATTTGACTGTAATGCATAACATTTGCTTCAACTTTATCCACCAGAAGCCAATCTTGAATCAGTTCATATCTATTCTTCAAATCTAACAGGAAGAAGAAAAAAAAAAA

Coding sequence (CDS)

ATGGAGCTGGATGGCATCGATGGTATGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCAACAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCTGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGTGTCCCAATGGGCATACCCTCTGTTCTTCGTGTAAAACAAGGGTAGACAACCGTTGCCCGACATGCAGGCAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCGCTTAAACTGGCTTGTAAATTCTCCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACATGAATCTGCCTGTTACTATAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGCAATATTCCTTTCCTTGTTTCCCATCTTCGGGATGATCACAAGGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCATGCGAAGTCGAAAACGCCACATGGATGCTAACTGTCTTCCACTGCTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTGCGATTCATGGGGGACGAAACCGACGCTCGAAACTTCAGTTACAGCCTCGAGGTTGGTGGAAATGGTAGGAAGCTGATATGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTTAGGGACAGCCATGACGGTCTCATTATACAACGAAACATGGCGCTGTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATCACGGGACGGATTTGGAAAGAACAAAATAAACAGTAA

Protein sequence

MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ
Homology
[Close]
BLAST of CsGy6G006860 vs. NCBI nr
Match: XP_004140587.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus] >KGN46356.1 hypothetical protein Csa_6G087840 [Cucumis sativus])

HSP 1 Score: 656.0 bits (1691), Expect = 6.3e-185
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. NCBI nr
Match: XP_008459990.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo])

HSP 1 Score: 654.4 bits (1687), Expect = 1.8e-184
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. NCBI nr
Match: XP_022929797.1 (E3 ubiquitin-protein ligase SINAT3-like [Cucurbita moschata] >XP_022992340.1 E3 ubiquitin-protein ligase SINAT3-like [Cucurbita maxima] >XP_023548870.1 E3 ubiquitin-protein ligase SINAT3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643.7 bits (1659), Expect = 3.2e-181
Identity = 296/304 (97.37%), Postives = 302/304 (99.34%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC E
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCPE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. NCBI nr
Match: XP_022157793.1 (E3 ubiquitin-protein ligase SINAT3-like [Momordica charantia])

HSP 1 Score: 636.7 bits (1641), Expect = 4.0e-179
Identity = 291/304 (95.72%), Postives = 301/304 (99.01%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGI+G+PSMDVMDEED TLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIEGVPSMDVMDEEDTTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCS+CKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKF T+GC E
Sbjct: 61  YPPIHQCPNGHTLCSTCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTYGCPE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHE+ACY+RPYTCPYAGSDCP+DG+IPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHEAACYFRPYTCPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARN+SYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGE+KELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGEKKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. NCBI nr
Match: XP_023005052.1 (E3 ubiquitin-protein ligase SINAT3-like [Cucurbita maxima])

HSP 1 Score: 614.8 bits (1584), Expect = 1.6e-172
Identity = 284/305 (93.11%), Postives = 291/305 (95.41%), Query Frame = 0 

Query: 1   MELDGID-GMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNS 60
           MELDG +   PSMDVMDEEDKTLQ HCQFPSISKPRI+NNDNPTTTSVHELLECPVCTNS
Sbjct: 1   MELDGFERAPPSMDVMDEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQ 120
           MYPPIHQCPNGHTLCSSCKT+VDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC 
Sbjct: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120

Query: 121 EILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EILPYYSKLKHESACY+RPYTCPYAGSDCP+DG IPFLVSHLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPVDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSL 240
           VKANPCEVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDETDARN+SYSL
Sbjct: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240

Query: 241 EVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWK 300
           E+GGNGRKL WEGNPRSIRDNHKKVRDSHDGLII RNMALFFSGGERKELKLRI GRIWK
Sbjct: 241 EIGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300

Query: 301 EQNKQ 305
           EQNKQ
Sbjct: 301 EQNKQ 305

[Close]
BLAST of CsGy6G006860 vs. TAIR10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 498.8 bits (1283), Expect = 2.3e-141
Identity = 233/314 (74.20%), Postives = 261/314 (83.12%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSIS-----------KPRINNNDNPTTTSVHE 60
           M+LD +D   +MDV D+E+    RH  + S+S                        SVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSXXXXXXXXXXXXXXXXXXXXXXXXSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDM 180
            CK  + GC EI PYYSKLKHE+ C +RPY+CPYAGS+C + G+IPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARN++YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of CsGy6G006860 vs. TAIR10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 478.4 bits (1230), Expect = 3.3e-135
Identity = 217/258 (84.11%), Postives = 238/258 (92.25%), Query Frame = 0 

Query: 45  TSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIA 104
           TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+A
Sbjct: 56  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 115

Query: 105 ESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDD 164
           ESL+L CKF   GC EI PYYSKLKHES C +RPY+CPYAGS+C I G+IPFLV+HLRDD
Sbjct: 116 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 175

Query: 165 HKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 224
           HKVDMH+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 176 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 235

Query: 225 FMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGG 284
           FMGDE DAR++SYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG
Sbjct: 236 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 295

Query: 285 ERKELKLRITGRIWKEQN 303
           +RKELKLR+TG+IWKEQ+
Sbjct: 296 DRKELKLRVTGKIWKEQH 313

[Close]
BLAST of CsGy6G006860 vs. TAIR10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2)

HSP 1 Score: 448.7 bits (1153), Expect = 2.8e-126
Identity = 206/290 (71.03%), Postives = 238/290 (82.07%), Query Frame = 0 

Query: 15  MDEEDKTLQRHCQFPSISKP---RINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C +RPYTCPYAGS+C + G+IP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ FSYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of CsGy6G006860 vs. TAIR10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-124
Identity = 195/259 (75.29%), Postives = 227/259 (87.64%), Query Frame = 0 

Query: 43  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEK 102
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK RV N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 103 IAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLR 162
           +AESL++ C++   GCQ+I PYYSKLKHE  C +R Y+CPYAGS+C + G+IP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 163 DDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 222
           DDHKVDMH GCTFNHRYVK+NP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAF
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 223 LRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFS 282
           LRFMGDE +A+ FSYSLEVG + RKL W+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 283 GGERKELKLRITGRIWKEQ 302
           G +++ELKLR+TGRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]
BLAST of CsGy6G006860 vs. TAIR10
Match: AT5G53360.1 (TRAF-like superfamily protein)

HSP 1 Score: 350.9 bits (899), Expect = 7.9e-97
Identity = 159/204 (77.94%), Postives = 178/204 (87.25%), Query Frame = 0 

Query: 98  LALEKIAESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFL 157
           +ALEK+AESL+L CK+   GC  I PYYSKLKHES C +RPY+CPYAGS+C   G+I FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 158 VSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAP 217
           V+HLRDDHKVDMH+GCTFNHRYVK+NP EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 218 VYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNM 277
           VYMAFLRFMGDE DARN++YSLEVGG+GRK  WEG PRS+RD+H       DGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHXXXXXXXDGLIIQRNM 194

Query: 278 ALFFSGGERKELKLRITGRIWKEQ 302
           ALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match: sp|Q84JL3|SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 4.2e-140
Identity = 233/314 (74.20%), Postives = 261/314 (83.12%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSIS-----------KPRINNNDNPTTTSVHE 60
           M+LD +D   +MDV D+E+    RH  + S+S                        SVHE
Sbjct: 1   MDLDSMDCTSTMDVTDDEEIHQDRH-SYASVSXXXXXXXXXXXXXXXXXXXXXXXXSVHE 60

Query: 61  LLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKL 120
           LLECPVCTNSMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+AESL+L
Sbjct: 61  LLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLEL 120

Query: 121 ACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDM 180
            CK  + GC EI PYYSKLKHE+ C +RPY+CPYAGS+C + G+IPFLV+HLRDDHKVDM
Sbjct: 121 PCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDM 180

Query: 181 HSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240
           HSGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 181 HSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 240

Query: 241 TDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKEL 300
           T+ARN++YSLEVGG GRKLIWEG PRS+RD+H+KVRDSHDGLIIQRNMALFFSGG+RKEL
Sbjct: 241 TEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKEL 300

Query: 301 KLRITGRIWKEQNK 304
           KLR+TGRIWKEQ +
Sbjct: 301 KLRVTGRIWKEQQQ 313

[Close]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match: sp|Q9STN8|SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.9e-134
Identity = 217/258 (84.11%), Postives = 238/258 (92.25%), Query Frame = 0 

Query: 45  TSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIA 104
           TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK RV NRCPTCRQELGDIRCLALEK+A
Sbjct: 56  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 115

Query: 105 ESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDD 164
           ESL+L CKF   GC EI PYYSKLKHES C +RPY+CPYAGS+C I G+IPFLV+HLRDD
Sbjct: 116 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 175

Query: 165 HKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 224
           HKVDMH+G TFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 176 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 235

Query: 225 FMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGG 284
           FMGDE DAR++SYSLEVGG+GRKL WEG PRSIRD+H+KVRDS+DGLIIQRNMALFFSGG
Sbjct: 236 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 295

Query: 285 ERKELKLRITGRIWKEQN 303
           +RKELKLR+TG+IWKEQ+
Sbjct: 296 DRKELKLRVTGKIWKEQH 313

[Close]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match: sp|Q10L91|DIS1_ORYSJ (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.0e-129
Identity = 206/258 (79.84%), Postives = 234/258 (90.70%), Query Frame = 0 

Query: 44  TTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKI 103
           ++SV ELLECPVC ++MYPPIHQC NGHTLCS CK RV NRCPTCR ELG+IRCLALEK+
Sbjct: 44  SSSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 103

Query: 104 AESLKLACKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRD 163
           A SL+L CK+  FGC  I PYY KLKHES C YRPY+CPYAGS+C + G+IP+LV+HL+D
Sbjct: 104 AASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKD 163

Query: 164 DHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 223
           DHKVDMH+GCTFNHRYVK+NP EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFL
Sbjct: 164 DHKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFL 223

Query: 224 RFMGDETDARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSG 283
           RFMGD+ +A+N+SYSLEVGG GRK+IW+G PRSIRD+H+KVRDS+DGLIIQRNMALFFSG
Sbjct: 224 RFMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSG 283

Query: 284 GERKELKLRITGRIWKEQ 302
           GERKELKLR+TGRIWKEQ
Sbjct: 284 GERKELKLRVTGRIWKEQ 301

[Close]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match: sp|Q8S3N1|SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 462.6 bits (1189), Expect = 3.3e-129
Identity = 216/291 (74.23%), Postives = 243/291 (83.51%), Query Frame = 0 

Query: 11  SMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNG 70
           S+D + ++D+  Q+H QF S              TSV+ELLECPVCTNSMYPPIHQC NG
Sbjct: 5   SIDSVIDDDEIHQKH-QFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNG 64

Query: 71  HTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKH 130
           HTLCS+CK+RV NRCPTCRQELGDIRCLALEK+AESL+L CK+   GC  I PYYSKLKH
Sbjct: 65  HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKH 124

Query: 131 ESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENA 190
           ES C +RPY+CPYAGS+C   G+I FLV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA
Sbjct: 125 ESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENA 184

Query: 191 TWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIW 250
           TWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE DARN++YSLEVGG+GRK  W
Sbjct: 185 TWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTW 244

Query: 251 EGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           EG PRS+RD+H       DGLIIQRNMALFFSGG++KELKLR+TGRIWKEQ
Sbjct: 245 EGTPRSVRDSHXXXXXXXDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match: sp|Q9M2P4|SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 5.0e-125
Identity = 206/290 (71.03%), Postives = 238/290 (82.07%), Query Frame = 0 

Query: 15  MDEEDKTLQRHCQFPSISKP---RINNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGH 74
           MD E KT +        +KP    I      +   V+ELLECPVCTN MYPPIHQCPNGH
Sbjct: 19  MDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGH 78

Query: 75  TLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQEILPYYSKLKHE 134
           TLCS+CK RV N CPTCR ELG+IRCLALEK+AESL++ C++   GC +I PYYSKLKHE
Sbjct: 79  TLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHE 138

Query: 135 SACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAT 194
             C +RPYTCPYAGS+C + G+IP LV HL+DDHKVDMH GCTFNHRYVK+NP EVENAT
Sbjct: 139 QHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENAT 198

Query: 195 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWE 254
           WMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDE +A+ FSYSLEVG +GRKL W+
Sbjct: 199 WMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQ 258

Query: 255 GNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQ 302
           G PRSIRD+H+KVRDS DGLII RN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 259 GIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]
BLAST of CsGy6G006860 vs. TrEMBL
Match: tr|A0A0A0KF08|A0A0A0KF08_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_6G087840 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 4.2e-185
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. TrEMBL
Match: tr|A0A1S3CBH3|A0A1S3CBH3_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103498939 PE=3 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 1.2e-184
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60
           MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM
Sbjct: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNSM 60

Query: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120
           YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE
Sbjct: 61  YPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQE 120

Query: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180
           ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV
Sbjct: 121 ILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRYV 180

Query: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLE 240
           KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARNFSYSLE
Sbjct: 181 KANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSLE 240

Query: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300
           VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE
Sbjct: 241 VGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKE 300

Query: 301 QNKQ 305
           QNKQ
Sbjct: 301 QNKQ 304

[Close]
BLAST of CsGy6G006860 vs. TrEMBL
Match: tr|A0A067H6D5|A0A067H6D5_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis OX=2711 GN=CISIN_1g020592mg PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.6e-147
Identity = 249/310 (80.32%), Postives = 272/310 (87.74%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKP--RINNND-------NPTTTSVHELL 60
           MEL  I+ +PS D+ DE++    R  QFPSISKP    NNN+       NP TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHS 180
           K+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARN++YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of CsGy6G006860 vs. TrEMBL
Match: tr|V4U1Z4|V4U1Z4_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina OX=85681 GN=CICLE_v10021159mg PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.6e-147
Identity = 249/310 (80.32%), Postives = 272/310 (87.74%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKP--RINNND-------NPTTTSVHELL 60
           MEL  I+ +PS D+ DE++    R  QFPSISKP    NNN+       NP TTSVHELL
Sbjct: 1   MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL 60

Query: 61  ECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLAC 120
           ECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L C
Sbjct: 61  ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 120

Query: 121 KFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHS 180
           K+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C I G+IPFLV+HLRDDHKVDMHS
Sbjct: 121 KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS 180

Query: 181 GCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETD 240
           GCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET+
Sbjct: 181 GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE 240

Query: 241 ARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKL 300
           ARN++YSLEVGGNGRKL WEG PRSIRD+HKKVRDSHDGLIIQRNMALFFSGG+RKELKL
Sbjct: 241 ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL 300

Query: 301 RITGRIWKEQ 302
           R+TGRIWKEQ
Sbjct: 301 RVTGRIWKEQ 310

[Close]
BLAST of CsGy6G006860 vs. TrEMBL
Match: tr|A0A2C9WNU8|A0A2C9WNU8_MANES (E3 ubiquitin-protein ligase OS=Manihot esculenta OX=3983 GN=MANES_01G246000 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.5e-147
Identity = 247/311 (79.42%), Postives = 271/311 (87.14%), Query Frame = 0 

Query: 1   MELDGIDGMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTT----------SVHEL 60
           MELD I+ MPS D+ D ED+    H QFPS+ KP+ NNN N + T          SVHEL
Sbjct: 1   MELDTIESMPSSDLTD-EDEIHPHHIQFPSLPKPQSNNNINISNTNSVSSAIQSISVHEL 60

Query: 61  LECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLA 120
           LECPVCTNSMYPPIHQC NGHTLCS+CKTRV NRCPTCRQELGDIRCLALEK+AESL+L 
Sbjct: 61  LECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELP 120

Query: 121 CKFSTFGCQEILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMH 180
           CK+ + GC EI PYYSKLKHE+ C +RPY CPYAGS+C + G+IPFLV+HLRDDHKVDMH
Sbjct: 121 CKYMSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECVVVGDIPFLVAHLRDDHKVDMH 180

Query: 181 SGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET 240
           SGCTFNHRYVK+NP EVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDET
Sbjct: 181 SGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDET 240

Query: 241 DARNFSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELK 300
           +ARN+SYSLEVGGNGRKLIWEG PRSIRD+H+KVRDSHDGLIIQRNMALFFSGG+RKELK
Sbjct: 241 EARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELK 300

Query: 301 LRITGRIWKEQ 302
           LR+TGRIWKEQ
Sbjct: 301 LRVTGRIWKEQ 310

The following BLAST results are available for this feature:
BLAST of CsGy6G006860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140587.16.3e-185100.00PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus] >KGN46356.1 hypo... [more]
XP_008459990.11.8e-18499.67PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo][more]
XP_022929797.13.2e-18197.37E3 ubiquitin-protein ligase SINAT3-like [Cucurbita moschata] >XP_022992340.1 E3 ... [more]
XP_022157793.14.0e-17995.72E3 ubiquitin-protein ligase SINAT3-like [Momordica charantia][more]
XP_023005052.11.6e-17293.11E3 ubiquitin-protein ligase SINAT3-like [Cucurbita maxima][more]
BLAST of CsGy6G006860 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61790.12.3e-14174.20Protein with RING/U-box and TRAF-like domains[more]
AT4G27880.13.3e-13584.11Protein with RING/U-box and TRAF-like domains[more]
AT3G58040.12.8e-12671.03seven in absentia of Arabidopsis 2[more]
AT2G41980.11.5e-12475.29Protein with RING/U-box and TRAF-like domains[more]
AT5G53360.17.9e-9777.94TRAF-like superfamily protein[more]
BLAST of CsGy6G006860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84JL3|SINA3_ARATH4.2e-14074.20E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=... [more]
sp|Q9STN8|SINA4_ARATH5.9e-13484.11E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=... [more]
sp|Q10L91|DIS1_ORYSJ2.0e-12979.84E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS... [more]
sp|Q8S3N1|SINA5_ARATH3.3e-12974.23E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=... [more]
sp|Q9M2P4|SINA2_ARATH5.0e-12571.03E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=... [more]
BLAST of CsGy6G006860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KF08|A0A0A0KF08_CUCSA4.2e-185100.00E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_6G087840 PE=3 SV=1[more]
tr|A0A1S3CBH3|A0A1S3CBH3_CUCME1.2e-18499.67E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103498939 PE=3 SV=1[more]
tr|A0A067H6D5|A0A067H6D5_CITSI2.6e-14780.32E3 ubiquitin-protein ligase OS=Citrus sinensis OX=2711 GN=CISIN_1g020592mg PE=3 ... [more]
tr|V4U1Z4|V4U1Z4_9ROSI2.6e-14780.32E3 ubiquitin-protein ligase OS=Citrus clementina OX=85681 GN=CICLE_v10021159mg P... [more]
tr|A0A2C9WNU8|A0A2C9WNU8_MANES3.5e-14779.42E3 ubiquitin-protein ligase OS=Manihot esculenta OX=3983 GN=MANES_01G246000 PE=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013010Znf_SIAH
IPR004162SINA-like
IPR0181217-in-absentia-prot_TRAF-dom
IPR008974TRAF-like
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G006860.1CsGy6G006860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 12..107
e-value: 1.2E-7
score: 33.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 108..161
e-value: 2.1E-15
score: 58.8
IPR008974TRAF-likeGENE3DG3DSA:2.60.210.10coord: 176..295
e-value: 1.5E-33
score: 117.3
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 106..298
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 95..294
e-value: 6.7E-74
score: 248.1
NoneNo IPR availablePANTHERPTHR10315:SF42SUBFAMILY NOT NAMEDcoord: 40..302
NoneNo IPR availableCDDcd03829Sinacoord: 167..295
e-value: 4.43976E-64
score: 199.535
NoneNo IPR availableCDDcd16571RING-HC_SIAHscoord: 51..89
e-value: 3.59349E-14
score: 64.2282
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 47..111
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315E3 UBIQUITIN PROTEIN LIGASE SIAHcoord: 40..302
IPR013010Zinc finger, SIAH-typePROSITEPS51081ZF_SIAHcoord: 106..166
score: 13.81
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 53..89
score: 9.878

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G006860Cla007049Watermelon (97103) v1cgybwmB501
CsGy6G006860Csa6G087840Cucumber (Chinese Long) v2cgybcuB282
CsGy6G006860MELO3C022407Melon (DHL92) v3.5.1cgybmeB379
CsGy6G006860ClCG06G001270Watermelon (Charleston Gray)cgybwcgB438
CsGy6G006860CSPI06G06850Wild cucumber (PI 183967)cgybcpiB288
CsGy6G006860Lsi09G018130Bottle gourd (USVL1VR-Ls)cgyblsiB366
CsGy6G006860MELO3C022407.2Melon (DHL92) v3.6.1cgybmedB381
CsGy6G006860CsaV3_6G007200Cucumber (Chinese Long) v3cgybcucB298
CsGy6G006860Cla97C06G110530Watermelon (97103) v2cgybwmbB446
CsGy6G006860Bhi12G002068Wax gourdcgybwgoB509
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G006860Cucurbita maxima (Rimu)cgybcmaB876
CsGy6G006860Cucurbita pepo (Zucchini)cgybcpeB788