Csa6G083570 (gene) Cucumber (Chinese Long) v2

NameCsa6G083570
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 5623862 .. 5624104 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCACTACAACCTTGTGCACAATATCAACGAACTTGGTGTGAAGTTCTTAGGTTCTCCGCCCCATTTGATATTTCTCCCAAAAACTCCGGTCCAGTTGCTAAATTATCTTCGAAAACAACAGGAATGTATGATTTGATGCTGGTTTTCTCATCTAGCTTCATTGAAACAGTTGAGCTCCAAGTGCTTTTGCTTGTGTCGAAAGTTTCACTTTCATCAAAGCAGGTTGCTGCAACCTAA

mRNA sequence

ATGGCTGCACTACAACCTTGTGCACAATATCAACGAACTTGGTGTGAAGTTCTTAGGTTCTCCGCCCCATTTGATATTTCTCCCAAAAACTCCGGTCCAGTTGCTAAATTATCTTCGAAAACAACAGGAATGTATGATTTGATGCTGGTTTTCTCATCTAGCTTCATTGAAACAGTTGAGCTCCAAGTGCTTTTGCTTGTGTCGAAAGTTTCACTTTCATCAAAGCAGGTTGCTGCAACCTAA

Coding sequence (CDS)

ATGGCTGCACTACAACCTTGTGCACAATATCAACGAACTTGGTGTGAAGTTCTTAGGTTCTCCGCCCCATTTGATATTTCTCCCAAAAACTCCGGTCCAGTTGCTAAATTATCTTCGAAAACAACAGGAATGTATGATTTGATGCTGGTTTTCTCATCTAGCTTCATTGAAACAGTTGAGCTCCAAGTGCTTTTGCTTGTGTCGAAAGTTTCACTTTCATCAAAGCAGGTTGCTGCAACCTAA

Protein sequence

MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVELQVLLLVSKVSLSSKQVAAT*
BLAST of Csa6G083570 vs. TrEMBL
Match: A0A0A0KD60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083570 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 8.8e-36
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE 60
          MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE
Sbjct: 1  MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE 60

Query: 61 LQVLLLVSKVSLSSKQVAAT 81
          LQVLLLVSKVSLSSKQVAAT
Sbjct: 61 LQVLLLVSKVSLSSKQVAAT 80

BLAST of Csa6G083570 vs. NCBI nr
Match: gi|700191118|gb|KGN46322.1| (hypothetical protein Csa_6G083570 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE 60
          MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE
Sbjct: 1  MAALQPCAQYQRTWCEVLRFSAPFDISPKNSGPVAKLSSKTTGMYDLMLVFSSSFIETVE 60

Query: 61 LQVLLLVSKVSLSSKQVAAT 81
          LQVLLLVSKVSLSSKQVAAT
Sbjct: 61 LQVLLLVSKVSLSSKQVAAT 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KD60_CUCSA8.8e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083570 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191118|gb|KGN46322.1|1.3e-35100.00hypothetical protein Csa_6G083570 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU167200cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G083570.1Csa6G083570.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU167200CU167200transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G083570CSPI06G06560Wild cucumber (PI 183967)cpicuB314
The following gene(s) are paralogous to this gene:

None