Csa6G079230 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCAAGGCAGAAAGCGGTGGCGACACTGCTTAATCTAATTAGAACCCTTAAAAACGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTTCCGTCGTTGAGACGTGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTACTGCCCTAACTTCTCCTTTTTGTCTTTTGCATCGATTTCTTTCCTCAATTTTATATCTTTGACTCTTTTATGCGGGGATTTAAGGTATACTGAGACAGGGTTCCCTGTGAATAG ATGGCGGCAAGGCAGAAAGCGGTGGCGACACTGCTTAATCTAATTAGAACCCTTAAAAACGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTTCCGTCGTTGAGACGTGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGGTTCCCTGTGAATAG ATGGCGGCAAGGCAGAAAGCGGTGGCGACACTGCTTAATCTAATTAGAACCCTTAAAAACGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTTCCGTCGTTGAGACGTGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGGTTCCCTGTGAATAG MAARQKAVATLLNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRVPCE*
BLAST of Csa6G079230 vs. TrEMBL
Match: A0A0A0K9W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G079230 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 4.5e-27 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1
BLAST of Csa6G079230 vs. TrEMBL
Match: V4VZ28_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022551mg PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 3.4e-14 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of Csa6G079230 vs. TrEMBL
Match: A0A067H377_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030786mg PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 3.4e-14 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of Csa6G079230 vs. TrEMBL
Match: A0A061FJK1_THECC (NADH dehydrogenase 1 alpha subcomplex assembly factor 3 isoform 1 OS=Theobroma cacao GN=TCM_042340 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.8e-13 Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Csa6G079230 vs. TrEMBL
Match: A0A061FKC7_THECC (NADH dehydrogenase 1 alpha subcomplex assembly factor 3 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_042340 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.8e-13 Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Csa6G079230 vs. TAIR10
Match: AT3G60150.1 (AT3G60150.1 Protein of unknown function (DUF498/DUF598)) HSP 1 Score: 77.4 bits (189), Expect = 3.5e-15 Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of Csa6G079230 vs. TAIR10
Match: AT2G44525.1 (AT2G44525.1 Protein of unknown function (DUF498/DUF598)) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-13 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
BLAST of Csa6G079230 vs. NCBI nr
Match: gi|700191074|gb|KGN46278.1| (hypothetical protein Csa_6G079230 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 6.5e-27 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1
BLAST of Csa6G079230 vs. NCBI nr
Match: gi|659120205|ref|XP_008460070.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 112.1 bits (279), Expect = 3.7e-22 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 1
BLAST of Csa6G079230 vs. NCBI nr
Match: gi|1009110353|ref|XP_015895139.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 87.4 bits (215), Expect = 9.7e-15 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 1
BLAST of Csa6G079230 vs. NCBI nr
Match: gi|985429169|ref|XP_015383687.1| (PREDICTED: uncharacterized protein LOC102631083 isoform X4 [Citrus sinensis]) HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of Csa6G079230 vs. NCBI nr
Match: gi|567906040|ref|XP_006445508.1| (hypothetical protein CICLE_v10022551mg [Citrus clementina]) HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |