Csa6G067970 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G067970
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAcyl carrier protein 2; contains IPR003231 (Acyl carrier protein (ACP)), IPR009081 (Acyl carrier protein-like)
LocationChr6 : 4838934 .. 4842181 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAATTTGAGGTTCTCACAGTCTTCGTGTTCGTTCGTCTTCGTCTCTAAGTTCTCTTTTCTTTTTTAAACTTCTCTTTCCCTTTCAATTCCTTTTCTCTTTTCAAATCTCAGATCTCTTTGTTAATTCTTACTTACAAAAATGTTCTCCATCGCCGGATCTTCGGTTTCCATGCCTTCTCTATCCGCTTCACTCAATCGAAGCCAGGTAATTCGGTTTTCACTTTGTTTTTAGGGCTCTTAGTTGTAAATTCATCTTACTTTTGCTTTTAAATTTTTAGATTTGGTTCTTTGAATTTCTTGGCTTGCATGTTTTTACTTTTTTTGAAGTGTTTTTCATGATCTGATTTGTTTTGTTTGGAAAATGTATGCGTTTGTTTCATGTGATTCAAGTTACAGACTGCTGTTTTTAGTTTATGAGATTTCTTGTTGAGATTGAGCGAGTAATTTAGAGATTATGGAGTATTTGAGTACAGCTTTATCTATTCATTTGCGCGCTTTAACTTTTGTGTAGTGTTTTTCACGATTCGATTTGTTTTCTTAATAACGGATGTTCTTCTTGTTCCATGTGATTGACGTTACGGATTAACTTTTAGGTTACTGAGGTTTCCTGCTTAGATTAAACGAGTAAATGACTGAGGTTCCATGTGATTGGATTCAGTTCAAGGAATTTTGAGTGTGGACGATGATAGATCTGATTACTTTCATTCACGTTTTTTAATTTTGGCGTCGGATTTGATTGTATAATCACATTCTTGAGATAACTTATCTAGTGTTTTCATTTTTTTTTTATGTTGTATGATTATTTAATGCTTCTACTGGAATCTTCGAACAGGTGACTAGCGGCCGAATCTCAGGTTTGAAATTAGTTCCCGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTACAGGCTGGGAAGCCTTCAGGTTTGCTGTGCGGTAAGTGATAATAATTTTTCTCTTCCATGGTTATGATGTTGAGAGTTCCATGCATATTTGTTTCTGGCTTTTAAGTTCGAATCGTCTAAGTTTTTTCCTCTGTCATTTGTACATACTGTTTTCAAAACTATTATTGATTTATGACATATGAATCCATGGCATGAAATTATGTTTCTGTTCGTGCTCGCTCAATCTTTGTATGGTTATTGTCCCTGTTTCTTCGATTATAATTGTTGGAGATTGGCACCTAATGACTTCCATATTCATAAAAAAAAAAAAGGTTAAAACTGCTAGAACAAGTCTGCACATAAGTAGCTGTTGTTTACTGTAGCATTTCAGCATCACATTTGCGTTGATAGATTCTACTACATTCCTTAATCCACACCATGAATATAAATAGTCTTCTGTAGTGTTAATATTTTGACCATCCTCAGGTGTTGTTTGTGAGTTGAAGTTAGGGCGTCGAAAGTTTCCATGATCGATATGGTTTTCTTCTTGTTGTGTGTGTGTGTTTCTTTATTACTATTAGTTTTGACTTTAGATTGTATTTCAATGGAGGATGATGGCTTGCTTTCACTTCGTTTCATTTCTTGCATGAATACGATAATGTTAGTAACATAGTGAAATTGTTGAACAGGCGAAACCAGAGACAGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGAAGATTCTAAGGTCAATGGAGAATCTAAGTTTACTGACCTCGGTGCTGATTCTCTTGATACGGTAATTACACATCTGCCCACATATTTACTTTAGTTTATTTACACTTTTTCCAATATTTTACATATAGTCCCATTTTCACTGCTAGCATCTGCCACTTAAGCTGATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTTTTTTTAAAGGTTTTGAAAATGTTCTTATAACTAAAAGTAGAATAGATCGGGAAAAAAAAACTTATTTTTGGAATTTGAAATTTGGAATTTAAGCTGAGAATTGAGATTTTGTTTTTACAAGCGGGAAGAACCCCTCATTTGTTGAGGAAACTAAGTATTTTTTTCTAAACCAAAAACTAGAACCTTTGATAAGTAGTTCTTAGAAACTTTTTTTTTTCTTTTAATTTTGCCAATAATACGATTCCTAAGGTTGATCAGCAGAATAAGCTTTTGGATCATTTTATTTTCTATCTCCAAGTTTGTTTTTTTGTTATCTATATTCTACCAATGATTTAAAAAAACTAAGCCAAAACTTGAAAACTAGAAAACAGTAAGCTTTCAAAAAAATTGTGTTTGTTTTTTGGAATTTGTCTAAGAATTCAATCATTCCATTCAAAAAAAATGCATAAAATGCAATTGGAAATGAGCTTAAGTTCTAAAAGAAACAAAAACAAAAAAGATGAATACCAAATGGGGCTTGACGAGGACTCAATATTTCCTAATTTTTTCCTCTGGGATAGATTGAATTCTTTCAGTTCTCTAAAAGGAAAAAAATTAAATATATGAAATGATAAGTAAATTTTAAAACCCAAACACTGCTTACTTCTATTTTAACTTTTATACTTTTTATATTTTATTCCCCCTCAAATAAATTAATGGTATTGTGAATTACATATGGCCTTAGGAAGAACCAAAATAAACGGACATGAAACTTTGAACGCTAGAGTGAGATCAAGAAAATAAGTTGCGCTTTGATTCACAGTTTAGATTACTTGATTTTCCAAATGCTTAAAAAACGTATATTCCTATTGAAAAATATTTTTTATAATTCAAAATATACACATTTTGGAAGGGTAAAAAATTAGTTCTCATTTTCAAAATCACTCTAAATTATATTTTTTAATCCAAAGCAATTTCCTTGTGTATATATATTGCCTGATTTTCTAATAACTTGAAAGCGTCTTTTTCTCTTGAAAATTCTTTTATATATGTGTATATATATATAATTTGAAATGCACATTCTAGAATGATTATAATATACGAAATCTAATAATATTCTTAACAACTTTCCATTTAAAATAATAATTGGTGATTAATTGTGTATTTGAATGCGGGGGATGTGATGTAGGTCGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAGGAAGAGAGTGCCCAAAGCATCACTACCGTCCAGGAGGCTGCCGACCTCATTGAGGACCTCATTTCTAAGGATTCTGCCTAATGAAAAATCATTTTACATTATTCCTATTTTAGATCTCTCTCTCTCTCTCTGGATTTTGCTTTAGCTGCTTCCACATTCTTCATCTCTCCTTTTTCTTTT

mRNA sequence

ATGTTCTCCATCGCCGGATCTTCGGTTTCCATGCCTTCTCTATCCGCTTCACTCAATCGAAGCCAGGTGACTAGCGGCCGAATCTCAGGTTTGAAATTAGTTCCCGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTACAGGCTGGGAAGCCTTCAGGTTTGCTGTGCGGCGAAACCAGAGACAGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGAAGATTCTAAGGTCAATGGAGAATCTAAGTTTACTGACCTCGGTGCTGATTCTCTTGATACGGTCGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAGGAAGAGAGTGCCCAAAGCATCACTACCGTCCAGGAGGCTGCCGACCTCATTGAGGACCTCATTTCTAAGGATTCTGCCTAA

Coding sequence (CDS)

ATGTTCTCCATCGCCGGATCTTCGGTTTCCATGCCTTCTCTATCCGCTTCACTCAATCGAAGCCAGGTGACTAGCGGCCGAATCTCAGGTTTGAAATTAGTTCCCGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTACAGGCTGGGAAGCCTTCAGGTTTGCTGTGCGGCGAAACCAGAGACAGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGAAGATTCTAAGGTCAATGGAGAATCTAAGTTTACTGACCTCGGTGCTGATTCTCTTGATACGGTCGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAGGAAGAGAGTGCCCAAAGCATCACTACCGTCCAGGAGGCTGCCGACCTCATTGAGGACCTCATTTCTAAGGATTCTGCCTAA

Protein sequence

MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAAKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA*
Homology
[Close]
BLAST of Csa6G067970 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 91/142 (64.08%), Postives = 101/142 (71.13%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPL-GKAIFPLRRNYRLGSLQVCCA 60
           M S+ G+S+SM S  ASL  S     R+S L+ V  P+ GK+  PLR   R     VCCA
Sbjct: 1   MASVTGTSISMASFKASLAPS-----RVSNLRSVSLPIKGKSFAPLRM--RSARFVVCCA 60

Query: 61  AKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEES 120
           AKPETV+KV  IV+KQLAL +DS V GESKF  LGADSLDTVEIVMGLEEEF I+VEEES
Sbjct: 61  AKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEES 120

Query: 121 AQSITTVQEAADLIEDLISKDS 142
           AQSI TVQ+AADLIE LI K S
Sbjct: 121 AQSIATVQDAADLIEKLIEKKS 135

[Close]
BLAST of Csa6G067970 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35
Identity = 90/135 (66.67%), Postives = 102/135 (75.56%), Query Frame = 1 

Query: 5   AGSS-VSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLG-SLQVCCAAKP 64
           AGSS + + S S SLNR+QV SG +S L+ V  P+   IFP  R+ R   S +VCC AK 
Sbjct: 6   AGSSLICIKSASCSLNRAQVPSG-LSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQ 65

Query: 65  ETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQS 124
           ETV +V EIV+KQLAL EDS+VNG SKF+ LGADSLDTVEIVMGLEEEF ISVEEESAQS
Sbjct: 66  ETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 125

Query: 125 ITTVQEAADLIEDLI 138
           I TVQ+AADLIE L+
Sbjct: 126 IQTVQDAADLIEKLV 139

[Close]
BLAST of Csa6G067970 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 1 

Query: 5   AGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAAKPET 64
           AG+S+ + S S S     +  GRIS L+ V  P+ +  FP  R+ +    +V C AKPET
Sbjct: 6   AGASICIKSASCS----PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPET 65

Query: 65  VDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQSIT 124
           V KV  IV+KQLAL +DS+VNG SKF+ LGADSLDTVEIVMGLEEEF ISVEEESAQSI 
Sbjct: 66  VAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQ 125

Query: 125 TVQEAADLIEDLISK 140
           TVQ+AADLIE L+ K
Sbjct: 126 TVQDAADLIEKLMEK 136

[Close]
BLAST of Csa6G067970 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 1 

Query: 5   AGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFP-LRRNYRLGSLQVCCAAKPE 64
           AG+S+ + S S S     +  GRIS L+ V  P+ +  FP L+ +    +L+V C AKPE
Sbjct: 6   AGASICIKSASFS----PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPE 65

Query: 65  TVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQSI 124
           TV KV  IV+KQLAL +DS+VNG SKF+ LGADSLDTVEIVMGLEEEF ISVEEESAQSI
Sbjct: 66  TVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSI 125

Query: 125 TTVQEAADLIEDLISK 140
            TVQ+AADLIE L+ K
Sbjct: 126 QTVQDAADLIEKLMEK 137

[Close]
BLAST of Csa6G067970 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.4e-31
Identity = 82/133 (61.65%), Postives = 93/133 (69.92%), Query Frame = 1 

Query: 7   SSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAAKPETVD 66
           SS+ + S S S     +  GRIS L+ V  P+ +  F  RR     SL+V C AKPETV 
Sbjct: 8   SSICIKSASCSA----LAPGRISSLRSVSLPVSRKSFFSRRGSF--SLRVNCQAKPETVT 67

Query: 67  KVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQSITTV 126
           KV  IV+KQLAL +DS V+G SKF+ LGADSLDTVEIVMGLEEEF ISVEEESAQSI TV
Sbjct: 68  KVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTV 127

Query: 127 QEAADLIEDLISK 140
           Q+AADLIE L+ K
Sbjct: 128 QDAADLIEKLMEK 134

[Close]
BLAST of Csa6G067970 vs. TrEMBL
Match: A0A0A0K8V5_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_6G067970 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.2e-69
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           QSITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]
BLAST of Csa6G067970 vs. TrEMBL
Match: A0A059D1E5_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_B01262 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-35
Identity = 90/141 (63.83%), Postives = 103/141 (73.05%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSL-QVCCA 60
           M S  G+S+ M   S SL R+Q ++ RIS L+ V  P+    +P   + R  S  QV CA
Sbjct: 1   MASATGTSLCMKLASCSLKRTQPSNSRISSLRSVSVPINTKGYPSLVSRRGSSRRQVLCA 60

Query: 61  AKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEES 120
           AKPETVDKV  IVRKQLAL +DS V G+SKF  LGADSLDTVEIVMGLEEEF ISVEEES
Sbjct: 61  AKPETVDKVCAIVRKQLALPDDSAVTGDSKFAALGADSLDTVEIVMGLEEEFGISVEEES 120

Query: 121 AQSITTVQEAADLIEDLISKD 141
           AQSITTVQEAAD+IE LI K+
Sbjct: 121 AQSITTVQEAADMIEKLIEKN 141

[Close]
BLAST of Csa6G067970 vs. TrEMBL
Match: A0A067L696_JATCU (Acyl carrier protein OS=Jatropha curcas GN=JCGZ_02028 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-33
Identity = 88/142 (61.97%), Postives = 104/142 (73.24%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           M SI G+S+SM SLS SL+     +G IS L++     G++   LR        +V CAA
Sbjct: 1   MASITGTSISMTSLSRSLSTQAPRNG-ISSLRISLPISGRSFPSLRLQKGASRFRVSCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPET++KV EIVRKQLALA ++ VNGESKF  LGADSLDTVEIVMGLEEEF ISVEEE+A
Sbjct: 61  KPETLNKVCEIVRKQLALAPETAVNGESKFVALGADSLDTVEIVMGLEEEFGISVEEETA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           QSI TVQ+AADLIE LI K +A
Sbjct: 121 QSILTVQDAADLIEKLIEKKAA 141

[Close]
BLAST of Csa6G067970 vs. TrEMBL
Match: V4RG97_9ROSI (Acyl carrier protein OS=Citrus clementina GN=CICLE_v10006180mg PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-33
Identity = 87/142 (61.27%), Postives = 100/142 (70.42%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           M S+ G+S  M SLS S  ++QV  GRIS +  V   +    FP  R       +V CAA
Sbjct: 1   MASVTGTSACMTSLSCSFKQTQV--GRISSVNSVSLSINGKSFPSLRMRSAPRFRVSCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKV +IV+KQLAL  D+ V GESKF  LGADSLDTVEIVMGLEEEF ISVEEESA
Sbjct: 61  KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEESA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           Q+I+TVQ+AADLIE LI   SA
Sbjct: 121 QTISTVQDAADLIEKLIETKSA 140

[Close]
BLAST of Csa6G067970 vs. TrEMBL
Match: A0A067G5Y7_CITSI (Acyl carrier protein OS=Citrus sinensis GN=CISIN_1g032506mg PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.2e-33
Identity = 86/142 (60.56%), Postives = 99/142 (69.72%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           M S+ G+S  M SLS S  ++Q   GRIS +  V   +    FP  R       +V CAA
Sbjct: 1   MASVTGTSACMTSLSCSFKQTQ---GRISSVNSVSLSINGKSFPSLRMRSAPRFRVSCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKV +IV+KQLAL  D+ V GESKF  LGADSLDTVEIVMGLEEEF ISVEEESA
Sbjct: 61  KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEESA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           Q+I+TVQ+AADLIE LI   SA
Sbjct: 121 QTISTVQDAADLIEKLIETKSA 139

[Close]
BLAST of Csa6G067970 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-27
Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 1 

Query: 13  SLSASLNRSQVTSGRISGLKLVPAPL---GKA--IFPLRRNYRLGSLQVCCAAKPETVDK 72
           S S SL  S + + RIS  K  PA +   GK    F LRR+     L V CAAK ET++K
Sbjct: 6   SASVSLQTSCLATTRISFQK--PALISNHGKTNLSFNLRRSIPSRRLSVSCAAKQETIEK 65

Query: 73  VVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQSITTVQ 132
           V  IV+KQL+L  D KV  E+KF DLGADSLDTVEIVMGLEEEF I + EE AQ I TV+
Sbjct: 66  VSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVE 125

Query: 133 EAADLIEDLISK 140
           +AA+LIE+LI++
Sbjct: 126 QAAELIEELINE 135

[Close]
BLAST of Csa6G067970 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 1 

Query: 43  FPLRRNYRLGSLQVCCAAKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVE 102
           F LRR      L V CA K ETV+KV EIV+KQL+L +D KV   +KFT+LGADSLDTVE
Sbjct: 41  FSLRR-LMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVE 100

Query: 103 IVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA 143
           IVMGLEEEF I++ EE A+ I TVQ+AA+LIE+L+ + +A
Sbjct: 101 IVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQEKTA 139

[Close]
BLAST of Csa6G067970 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4)

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-24
Identity = 62/101 (61.39%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 54  LQVCCAAKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDT------------V 113
           LQ+ CAAK ETV KV +IV++QLALA D  +  ESKF+ LGADSLDT            V
Sbjct: 45  LQISCAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHV 104

Query: 114 EIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA 143
           EIVM LEE+F ISVEE  AQ+ITT+QEAADLIEDL+ K  A
Sbjct: 105 EIVMALEEKFNISVEESDAQNITTIQEAADLIEDLVQKKPA 145

[Close]
BLAST of Csa6G067970 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2)

HSP 1 Score: 108.2 bits (269), Expect = 4.2e-24
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 54  LQVCCAAKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKI 113
           L V CAAKPETVDKV  +VRKQL+L E  ++   +KF  LGADSLDTVEIVMGLEEEF I
Sbjct: 48  LTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGI 107

Query: 114 SVEEESAQSITTVQEAADLIEDLI 138
            + EE AQSI TV++AA LIE+L+
Sbjct: 108 EMAEEKAQSIATVEQAAALIEELL 131

[Close]
BLAST of Csa6G067970 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3)

HSP 1 Score: 107.8 bits (268), Expect = 5.5e-24
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 54  LQVCCAAKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKI 113
           L V CAAKPETVDKV  +VRKQL+L E  ++   +KF  LGADSLDTVEIVMGLEEEF I
Sbjct: 48  LTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGI 107

Query: 114 SVEEESAQSITTVQEAADLIEDLI 138
            + EE AQSI TV++AA LIE+L+
Sbjct: 108 EMAEEKAQSIATVEQAAALIEELL 131

[Close]
BLAST of Csa6G067970 vs. NCBI nr
Match: gi|778710999|ref|XP_011656665.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 9.0e-69
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           QSITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]
BLAST of Csa6G067970 vs. NCBI nr
Match: gi|659117241|ref|XP_008458496.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60
           MFSIAGSSVSMPSLSAS N+SQVTSG+ISGLKLVPAPLGKAIFPLRRNYR GSLQVCCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETV+KVVEIVRKQLAL EDSKV+GESKF DLGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSITTVQEAADLIEDLISKDSA 143
           QSITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]
BLAST of Csa6G067970 vs. NCBI nr
Match: gi|702262438|ref|XP_010036671.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-35
Identity = 90/141 (63.83%), Postives = 103/141 (73.05%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSL-QVCCA 60
           M S  G+S+ M   S SL R+Q ++ RIS L+ V  P+    +P   + R  S  QV CA
Sbjct: 1   MASATGTSLCMKLASCSLKRTQPSNSRISSLRSVSVPINTKGYPSLVSRRGSSRRQVLCA 60

Query: 61  AKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEES 120
           AKPETVDKV  IVRKQLAL +DS V G+SKF  LGADSLDTVEIVMGLEEEF ISVEEES
Sbjct: 61  AKPETVDKVCAIVRKQLALPDDSAVTGDSKFAALGADSLDTVEIVMGLEEEFGISVEEES 120

Query: 121 AQSITTVQEAADLIEDLISKD 141
           AQSITTVQEAAD+IE LI K+
Sbjct: 121 AQSITTVQEAADMIEKLIEKN 141

[Close]
BLAST of Csa6G067970 vs. NCBI nr
Match: gi|20137323|sp|P93092.1|ACP1_CASGL (RecName: Full=Acyl carrier protein 1, chloroplastic; Short=ACP 1; Flags: Precursor)

HSP 1 Score: 154.1 bits (388), Expect = 1.9e-34
Identity = 91/142 (64.08%), Postives = 103/142 (72.54%), Query Frame = 1 

Query: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPL-GKAIFPLRRNYRLGSLQVCCA 60
           M S+ G+S+SM S  ASL  S     R+S L+ V  P+ GK+  PLR   R     VCCA
Sbjct: 1   MASVTGTSISMASFKASLAPS-----RVSNLRSVSLPIKGKSFAPLRM--RSARFVVCCA 60

Query: 61  AKPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEES 120
           AKPETV+KV  IV+KQLAL +DS V GESKF  LGADSLDTVEIVMGLEEEF I+VEEES
Sbjct: 61  AKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEES 120

Query: 121 AQSITTVQEAADLIEDLISKDS 142
           AQSI TVQ+AADLIE LI K S
Sbjct: 121 AQSIATVQDAADLIEKLIEKKS 135

[Close]
BLAST of Csa6G067970 vs. NCBI nr
Match: gi|1703087|sp|P52413.1|ACP3_CUPLA (RecName: Full=Acyl carrier protein 3, chloroplastic; Short=ACP; Flags: Precursor)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-33
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 1 

Query: 5   AGSS-VSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLG-SLQVCCAAKP 64
           AGSS + + S S SLNR+QV SG +S L+ V  P+   IFP  R+ R   S +VCC AK 
Sbjct: 6   AGSSLICIKSASCSLNRAQVPSG-LSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQ 65

Query: 65  ETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESAQS 124
           ETV +V EIV+KQLAL EDS+VNG SKF+ LGADSLDTVEIVMGLEEEF ISVEEESAQS
Sbjct: 66  ETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 125

Query: 125 ITTVQEAADLIEDLI 138
           I TVQ+AADLIE L+
Sbjct: 126 IQTVQDAADLIEKLV 139

The following BLAST results are available for this feature:
BLAST of Csa6G067970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACP1_CASGL1.2e-3664.08Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1[more]
ACP3_CUPLA1.0e-3566.67Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1[more]
ACP4_CUPLA2.1e-3360.74Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1[more]
ACP1_CUPLA1.8e-3261.03Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1[more]
ACP2_CUPLA7.4e-3161.65Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1[more]
BLAST of Csa6G067970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8V5_CUCSA6.2e-69100.00Acyl carrier protein OS=Cucumis sativus GN=Csa_6G067970 PE=3 SV=1[more]
A0A059D1E5_EUCGR5.9e-3563.83Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_B01262 PE=3 SV=1[more]
A0A067L696_JATCU1.9e-3361.97Acyl carrier protein OS=Jatropha curcas GN=JCGZ_02028 PE=3 SV=1[more]
V4RG97_9ROSI1.9e-3361.27Acyl carrier protein OS=Citrus clementina GN=CICLE_v10006180mg PE=3 SV=1[more]
A0A067G5Y7_CITSI7.2e-3360.56Acyl carrier protein OS=Citrus sinensis GN=CISIN_1g032506mg PE=3 SV=1[more]
BLAST of Csa6G067970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05020.12.4e-2756.06 acyl carrier protein 1[more]
AT5G27200.11.7e-2561.00 acyl carrier protein 5[more]
AT4G25050.21.1e-2461.39 acyl carrier protein 4[more]
AT1G54580.14.2e-2466.67 acyl carrier protein 2[more]
AT1G54630.15.5e-2466.67 acyl carrier protein 3[more]
BLAST of Csa6G067970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778710999|ref|XP_011656665.1|9.0e-69100.00PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis sativus][more]
gi|659117241|ref|XP_008458496.1|3.9e-6494.37PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo][more]
gi|702262438|ref|XP_010036671.1|8.5e-3563.83PREDICTED: acyl carrier protein 1, chloroplastic-like [Eucalyptus grandis][more]
gi|20137323|sp|P93092.1|ACP1_CASGL1.9e-3464.08RecName: Full=Acyl carrier protein 1, chloroplastic; Short=ACP 1; Flags: Precurs... [more]
gi|1703087|sp|P52413.1|ACP3_CUPLA1.6e-3366.67RecName: Full=Acyl carrier protein 3, chloroplastic; Short=ACP; Flags: Precursor[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0009536 plastid
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU103480cucumber EST collection version 3.0transcribed_cluster
CU109942cucumber EST collection version 3.0transcribed_cluster
CU146261cucumber EST collection version 3.0transcribed_cluster
CU148435cucumber EST collection version 3.0transcribed_cluster
CU151832cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G067970.1Csa6G067970.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU103480CU103480transcribed_cluster
CU146261CU146261transcribed_cluster
CU109942CU109942transcribed_cluster
CU148435CU148435transcribed_cluster
CU151832CU151832transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 94..135
score: 2.
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 63..137
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 63..135
score: 3.7
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 92..107
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 55..139
score: 1.9
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 66..133
score: 7.2
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 64..134
score: 20
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 62..140
score: 4.06
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..142
score: 3.6
NoneNo IPR availablePANTHERPTHR20863:SF29ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 1..142
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G067970Cla009335Watermelon (97103) v1cuwmB545
Csa6G067970MELO3C021366Melon (DHL92) v3.5.1cumeB427
Csa6G067970ClCG06G005420Watermelon (Charleston Gray)cuwcgB481
Csa6G067970Lsi09G013930Bottle gourd (USVL1VR-Ls)culsiB395
Csa6G067970MELO3C021366.2Melon (DHL92) v3.6.1cumedB407
Csa6G067970Cla97C06G114940Watermelon (97103) v2cuwmbB473
Csa6G067970Bhi12G001560Wax gourdcuwgoB546
Csa6G067970CSPI06G05380Wild cucumber (PI 183967)cpicuB314
Csa6G067970Cucsa.363270Cucumber (Gy14) v1cgycuB511
Csa6G067970CmaCh08G012000Cucurbita maxima (Rimu)cmacuB896
Csa6G067970CmaCh17G003050Cucurbita maxima (Rimu)cmacuB370
Csa6G067970CmoCh17G002950Cucurbita moschata (Rifu)cmocuB360
Csa6G067970Cp4.1LG12g02600Cucurbita pepo (Zucchini)cpecuB144
Csa6G067970Cp4.1LG17g00930Cucurbita pepo (Zucchini)cpecuB325
Csa6G067970CsGy6G005350Cucumber (Gy14) v2cgybcuB282
Csa6G067970Carg15957Silver-seed gourdcarcuB0351
Csa6G067970Carg05487Silver-seed gourdcarcuB0074
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G067970Watermelon (97103) v2cuwmbB461
Csa6G067970Wax gourdcuwgoB557
Csa6G067970Cucumber (Chinese Long) v2cucuB113
Csa6G067970Cucumber (Gy14) v1cgycuB375
Csa6G067970Cucurbita maxima (Rimu)cmacuB271
Csa6G067970Cucurbita moschata (Rifu)cmocuB259
Csa6G067970Cucurbita moschata (Rifu)cmocuB881
Csa6G067970Melon (DHL92) v3.5.1cumeB496
Csa6G067970Watermelon (Charleston Gray)cuwcgB472
Csa6G067970Watermelon (97103) v1cuwmB494
Csa6G067970Cucurbita pepo (Zucchini)cpecuB631
Csa6G067970Bottle gourd (USVL1VR-Ls)culsiB460
Csa6G067970Cucumber (Gy14) v2cgybcuB141
Csa6G067970Melon (DHL92) v3.6.1cumedB475
Csa6G067970Silver-seed gourdcarcuB0634