Cp4.1LG12g02600 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTAACCAAACAGAAATCAAGTGAAGAAGGAGCAGTAGCTGTGTGGAACTGGAATAACAAATGAGCGTGTCCAAACACAATTCGATATAAATTAAGTCCAAAACCTGAACTACGCTACCAAACAAACATCTATAAAAGCGTTTTGTTTGCAATTTGAGGTTTCTCACAGTCTTCGTGCTCTCTTGCTGTAGATTCCATCTCTCTCTCTTTCCCTTTCATCGCATTTTCTTTCAAATCTCAGATCTCTCTGTAAACTCCCTCCATAACGAAAATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGTCAGGTAAATCGTTTTTCCTCCGCTTTTTAGTTCGCTTTTAGGACTCTTAGTTGTAAATTCAAGTTACTTTTGCTCGGAACTTTGTTAATTTGGTTCCATGAATCTATTGATTGCGTGCTTTACTTCTGCTGAGTGTTTTCAGGATCTGATATGTTTTCTCGAAACGTATGTGTTTATTCCATGCGATTAAAGTTACAGATTACTGTTTTGGCTACTGAGATTCTTGTTGAGATTGCACGAGATTTTTATTCTTGAAGATTTGACTAGACTACATTCGGTGCACGATGATAGATCTGATTAAGTTATTTCGCGTCCTTGAGTTTTGGCGTCGGATTTGATTGTAGAATCTTTCTTTTAAGATCGAGAAGTTAACTAATTTTCATATTTAACGTGTTATCTTATTTTTAATGCTTCTGCTGCATTTTTCGAGCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGTAAGTGCTCTTCTGATGTATTTATTTAATCGTCAGCGTCGTTATCCTTTTAAGTTCTTTCTGTATATAGTACATACTGTTTCAAAACTATTCTTGTTTGCTCATATTATTCTCTCTGAAATTATTGCAACAAATAGGCTAGTAATAACTGAACTCAATTCAACAGCAGGTCATATACTAGATCCCAGTCCTCTTTTATGATATGACATGTGGCTGTTTATTATATGTGATTCTCTCCTTTTCTTTTTGTAGTTTTCTGTTTCTGCAGATTATGATTGTGTGAGACTAGCGGATAAGACTTCCATACACATCAAAAAGTTCGATATAGATAGATGAAAACTGCTAGAACAAATCGGCATACAGATAGCTGCTGTTGTCTGTTTTAGAATTTCCTCATCACATTTTCGTTGACTCTGATAATCTTTCACAATTGTATTCTCATTGATCAGAAACATTACAACTCAGTCTATTTTTAAGACTTTAGACTACTGAATACATCTTGACAACTAACAGAATAACAAAACGAACACTCGACTATGTCATTGTACTCCTAAATGTTATAGATCTCTTTTTTTCTTGCATCCATACGATAATGTTACAGAACTTATGAAACTCTTGGACAGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTCAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTAACAAATGTTCTTCAACGTATTATACTTGTGCAATATACTGTAAAATGGTATCTCATTTTCACTGCAGAAGTATCTACCTCCTTTGATGATCATTTATTTTTTTGTTTTTAAGAATTAAGAATATAAACAATGCTTTCAACCCTGAGTTTCTTTGTTTTGTTATCTTTGGAAACATTGCCAAGTTTTAAAAATTAAAAACAAGTAAAATTTTTCTGTTTTTAGAATTTGACTAAAAATTTAAATCTTACTTTACAAGGGGTGATTGTTGTTTATAAAACGAACCTTTTTTTTTTTCAAAATAAATAACTAAATAGTTATCAAATATAGGTTGGTCTCAGTTATTTTCTATTTTCTTTGTTTGGGTGCCATTTCATTCCATTTGGCGTTTATCATTTGTCAAAAATAGGATCGATTGAACTTTCACTTCTGAGTTTCTTTGTTTGCAAAACATTATCATAGTTTTGAAAATTTTAAAAATAAATTGCAAAAATATGTTTCATTTGTCAAAAATAGGATCGAATGAACTTTCACCCATGAGTTTCTTTGTTTGTAAAACATTATCAAAATTTTGAAAATTTGAAAAATAAATGGCAAAAATATGTTTTTGTTTCTAGAATTTGGTTAACATCCTTTTATTACTATTATGAGAAAACTAGGTCATTTTTTTAAAGGTCTTAGTTATTTTCTATTTTCTTCGGTTGTGTTGTCATTTGATTTCGATTCATGTTTATCGTTTCAAAAATAAAAAATAGGATCGATTGAATTCATTCCATTTTCTAAAAAGGAAAAATGATTTTAAAACCGGAAAACAAGTTTTTAATAATAAATTTCTTTAATTTTTCCAAAATTTTATTTTTAGACACCCAATCTTTCTCTCTTTAGCATATATTCCCTCAAAAATATGTCTCCCCAATTTACTTATTCTCTCTGTACACTTTTTTTTCTTTCTCTAATCATATCTGTCTAGAATTCCTCTTTACTTTTTGAAATTCTCTCCATAACTTCTTATTGTTAAACATATTATAAATATGAGTATAACGTTAATATTTGAAAAGTAAGTATTGTTTGATAAGAAATTATTGTCAAACATGGTTCGCTTTTCCATTTCTTATGTAGCTACCAACCATTTTTGGTTTTTAATAAACATGAAATAGTAACAAAAAAATATAAATAAAAAAGGGTTAGTTTCTGTCGCCTTGTTTCAATGGGGCCGGTTGTAGAAGACGTTAAAAGAAAGAAAATTTGTTTGGCATGATAACCATTTTAAAAGGTTTTCAATTTTATTTTAACTTTTTATATTTAGTATAGAAGGTTAAAATAAAATGTTCTAGAAAATTGGTCATTTATCCATTGAGTTAAGCACAAATTGGCATGCTTTATTCTTTGATAGTATTATATAAACATGAGCTTTCGTGATAATTAGAAAAGTTAATTCATTTAGTCTATTTTTTTCGGCATTTTTCACCCAGCCTCTCCCTTTGGGTTCGCCGGGTCGGATCTTATTTTTATTTATTTATTTTGTGCTTGATGAAGTGTTATTTATTATTTTTTATTTAAAAAAAAAAAGTAAAGGGGAGTGAAAATGAATTTAAATAAGTTATTGAATGGATGTGTAGGTTGAGATAGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAAATCTAATTTCGTAGTTCCGCCCGTATTTTAGATCTCTCTCTCTCTGGATTTTGGTAGCTTCTCTTTCTTTCTTTCTATCCACGTTCTTTTCCTTTTCGAACTTCTTAGAAACGTTTTCTGCGTGGCCTCACTTCCACTTCGTCCTTATTTATATTTTCCTTGATTATTGAGTTTCTGGGAATCCTCCATTTATTTCTTGCTGCTACCATTGCTTCTCTAATTGTTTTCTTATGTCTCATTGGATCAAGATCTACAAGGCTTGATAATTTTTTAGACAAAATTCTTGATCAAACTAAATAAATATTTAACACAAGAATGGTAAATATGAAAAAGCACTATCTTGAGGAGTAGGTTCAGAATCTTTCTTACATACAAAAATATCGAAAATATGAGTCATAATATGTAATTAATTTTGAA TGTAACCAAACAGAAATCAAGTGAAGAAGGAGCAGTAGCTGTGTGGAACTGGAATAACAAATGAGCGTGTCCAAACACAATTCGATATAAATTAAGTCCAAAACCTGAACTACGCTACCAAACAAACATCTATAAAAGCGTTTTGTTTGCAATTTGAGGTTTCTCACAGTCTTCGTGCTCTCTTGCTGTAGATTCCATCTCTCTCTCTTTCCCTTTCATCGCATTTTCTTTCAAATCTCAGATCTCTCTGTAAACTCCCTCCATAACGAAAATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGTCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTCAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTTGAGATAGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAAATCTAATTTCGTAGTTCCGCCCGTATTTTAGATCTCTCTCTCTCTGGATTTTGGTAGCTTCTCTTTCTTTCTTTCTATCCACGTTCTTTTCCTTTTCGAACTTCTTAGAAACGTTTTCTGCGTGGCCTCACTTCCACTTCGTCCTTATTTATATTTTCCTTGATTATTGAGTTTCTGGGAATCCTCCATTTATTTCTTGCTGCTACCATTGCTTCTCTAATTGTTTTCTTATGTCTCATTGGATCAAGATCTACAAGGCTTGATAATTTTTTAGACAAAATTCTTGATCAAACTAAATAAATATTTAACACAAGAATGGTAAATATGAAAAAGCACTATCTTGAGGAGTAGGTTCAGAATCTTTCTTACATACAAAAATATCGAAAATATGAGTCATAATATGTAATTAATTTTGAA ATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTATCTCCGCTTCTTTCAAGCACAGTCAGGTGTCTAACGGCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAAGGCCATTTTTCCCTTGCGAAGGAACTTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAACCAGAGACCATGGACAAGGTGGTTAAAATCGTCAAGAAACAGCTTGCTCTAGATGAGGATTCTGTGGTCAATGGAGAATCAAAATTTTCTGAGCTCGGAGCTGATTCTCTCGATACGGTTGAGATAGTGATGGGACTGGAAGAGGCATTTAAGATCAACGTGGAAGAAGAGAGCGCCCAAACCATCACCACCGTCCAAGAGGCCGCCGATATGATCGAGACTATTATTTCAAAGGACGGACCGAAGCCCGCAGCCTAA MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAAKPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESAQTITTVQEAADMIETIISKDGPKPAA
BLAST of Cp4.1LG12g02600 vs. Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34 Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.0e-31 Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30 Identity = 82/135 (60.74%), Postives = 100/135 (74.07%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30 Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 7.1e-29 Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TrEMBL
Match: A0A0A0K8V5_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_6G067970 PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 8.9e-55 Identity = 118/140 (84.29%), Postives = 131/140 (93.57%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TrEMBL
Match: A0A059D1E5_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_B01262 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32 Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TrEMBL
Match: V4RG97_9ROSI (Acyl carrier protein OS=Citrus clementina GN=CICLE_v10006180mg PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.4e-31 Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TrEMBL
Match: V4RYJ7_9ROSI (Acyl carrier protein OS=Citrus clementina GN=CICLE_v10006180mg PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 9.0e-31 Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TrEMBL
Match: A0A067G5Y7_CITSI (Acyl carrier protein OS=Citrus sinensis GN=CISIN_1g032506mg PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 9.0e-31 Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1) HSP 1 Score: 104.0 bits (258), Expect = 8.1e-23 Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TAIR10
Match: AT4G25050.2 (AT4G25050.2 acyl carrier protein 4) HSP 1 Score: 98.2 bits (243), Expect = 4.4e-21 Identity = 68/149 (45.64%), Postives = 86/149 (57.72%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5) HSP 1 Score: 97.4 bits (241), Expect = 7.5e-21 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TAIR10
Match: AT1G54630.1 (AT1G54630.1 acyl carrier protein 3) HSP 1 Score: 94.4 bits (233), Expect = 6.4e-20 Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. TAIR10
Match: AT1G54580.1 (AT1G54580.1 acyl carrier protein 2) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19 Identity = 67/145 (46.21%), Postives = 86/145 (59.31%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. NCBI nr
Match: gi|778710999|ref|XP_011656665.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54 Identity = 118/140 (84.29%), Postives = 131/140 (93.57%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. NCBI nr
Match: gi|659117241|ref|XP_008458496.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 220.7 bits (561), Expect = 1.7e-54 Identity = 117/140 (83.57%), Postives = 133/140 (95.00%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. NCBI nr
Match: gi|702262438|ref|XP_010036671.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Eucalyptus grandis]) HSP 1 Score: 146.7 bits (369), Expect = 3.1e-32 Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. NCBI nr
Match: gi|20137323|sp|P93092.1|ACP1_CASGL (RecName: Full=Acyl carrier protein 1, chloroplastic; Short=ACP 1; Flags: Precursor) HSP 1 Score: 146.7 bits (369), Expect = 3.1e-32 Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 1
BLAST of Cp4.1LG12g02600 vs. NCBI nr
Match: gi|567853049|ref|XP_006419688.1| (hypothetical protein CICLE_v10006180mg [Citrus clementina]) HSP 1 Score: 143.3 bits (360), Expect = 3.4e-31 Identity = 84/137 (61.31%), Postives = 100/137 (72.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |