Csa6G046290 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G046290
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAF02129.1
Location	Chr6 : 3733090 .. 3734050 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAAAACCTCAGGATACCACTCAATATCTGGAGCATGCTGATGCTGCAAAGGATTGTTGTGGTGACGACCTAGAGAGCGATGTTCATAGCCCTGAGGATTTCTCCTTGAGCGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAGGTTCATCCTCAATTGAATTAAAAGATAGTTCTAGTCAGACTATGATGAAATCAGATACTGACAAGGTATACTTCTTCTCCAACTTGTAAATATCATAATCTGTGTTGGATTTTTTTCAATAAAAGAATTTTTGTGGTATTGTTTTCATCTTGTTATTTTTTTTTCCCTTGCCAGAAAGATTATGATCTCTTTCCTTTCCTCAAATAAATCTTTTAGCCTATTAAGGAAAAATCTACTCATAATTTAGGTGAATGCTAATAAATTTCCTATTTCTTGTGTGGTGGTTCTGGAAAAAAAAATTCTATAGAAGGAAACAAAAAGAAGGTATGCTGTGGAAACGGGAACGGCTGCTAATCAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAGGGGTAAATCGTCGAATGAATCGAAATCATCATCCCCAAGATCTCAAGACTCATGCATATCAGCGGAGGTTGAGTCAAATTTGAACTTGGAGGATAACCTTCGAGTTGAAAGTTCACCGTTGATTGTGATGGGTTGTACTTTTTGCCTGCTTTATGTTATGGTGACCGATGCAGATCCCAGATGCCCTAAATGCAAAAGATCTGGCTTGCTCGACGCATTTCGTGGTAATCAGGTGAAGCGATCAAGAAAGAACTGAGTTTCCTTTCCAGGAGTATACATGGTGGCTGGTTTCAAATGCTCCAGTATATGCTCTTGAACTGATGCACCTTCTGCTTTTTTCTTGAACTGATACACCACCATCTTTTCACTTGGGGAGTCAGAATAGCATCT

mRNA sequence

ATGGGTTCAAAACCTCAGGATACCACTCAATATCTGGAGCATGCTGATGCTGCAAAGGATTGTTGTGGTGACGACCTAGAGAGCGATGTTCATAGCCCTGAGGATTTCTCCTTGAGCGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAGGTTCATCCTCAATTGAATTAAAAGATAGTTCTAGTCAGACTATGATGAAATCAGATACTGACAAGAAGGAAACAAAAAGAAGGTATGCTGTGGAAACGGGAACGGCTGCTAATCAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAGGGGTAAATCGTCGAATGAATCGAAATCATCATCCCCAAGATCTCAAGACTCATGCATATCAGCGGAGGTTGAGTCAAATTTGAACTTGGAGGATAACCTTCGAGTTGAAAGTTCACCGTTGATTGTGATGGGTTGTACTTTTTGCCTGCTTTATGTTATGGTGACCGATGCAGATCCCAGATGCCCTAAATGCAAAAGATCTGGCTTGCTCGACGCATTTCGTGGTAATCAGGTGAAGCGATCAAGAAAGAACTGA

Coding sequence (CDS)

ATGGGTTCAAAACCTCAGGATACCACTCAATATCTGGAGCATGCTGATGCTGCAAAGGATTGTTGTGGTGACGACCTAGAGAGCGATGTTCATAGCCCTGAGGATTTCTCCTTGAGCGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAGGTTCATCCTCAATTGAATTAAAAGATAGTTCTAGTCAGACTATGATGAAATCAGATACTGACAAGAAGGAAACAAAAAGAAGGTATGCTGTGGAAACGGGAACGGCTGCTAATCAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAGGGGTAAATCGTCGAATGAATCGAAATCATCATCCCCAAGATCTCAAGACTCATGCATATCAGCGGAGGTTGAGTCAAATTTGAACTTGGAGGATAACCTTCGAGTTGAAAGTTCACCGTTGATTGTGATGGGTTGTACTTTTTGCCTGCTTTATGTTATGGTGACCGATGCAGATCCCAGATGCCCTAAATGCAAAAGATCTGGCTTGCTCGACGCATTTCGTGGTAATCAGGTGAAGCGATCAAGAAAGAACTGA

Protein sequence

MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGNQVKRSRKN*

Homology

[Close]

BLAST of Csa6G046290 vs. TrEMBL
Match: A0A0A0KE76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046290 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60
           MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE
Sbjct: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS 120
           LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS
Sbjct: 61  LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS 120

Query: 121 SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL 180
           SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL
Sbjct: 121 SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL 180

Query: 181 DAFRGNQVKRSRKN 195
           DAFRGNQVKRSRKN
Sbjct: 181 DAFRGNQVKRSRKN 194

[Close]

BLAST of Csa6G046290 vs. TrEMBL
Match: A0A061FQU0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_044272 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-15
Identity = 67/180 (37.22%), Postives = 95/180 (52.78%), Query Frame = 1


Query: 26  LESDVHSPEDFS----LSVDQLNQDFNKSLVLKGSSSIELKDSSSQTMMKSDTDKKETKR 85
           + S + +  DF+    L++D+   +FNKS  L  SSSIEL D+           K E ++
Sbjct: 10  MSSSLDASADFTPKNCLNIDEFLGEFNKSYHLN-SSSIELDDNEK-------CHKGEARK 69

Query: 86  RYAVETGTAANQNDAYLDLKLS--PPGVYSR----GKSSNESKSSS--PRSQDSCISAEV 145
           R  +E      +    LDL LS  P G+  +    G  S  S +SS  P + DS  S EV
Sbjct: 70  RSFMEMENGEEEQRGSLDLNLSLTPLGLLQQKDLCGNQSEISSTSSCMPVNLDSSSSEEV 129

Query: 146 ESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGNQVKRSRK 194
           E +     N  +E   LI+MGC+ CL+YVMV++ +P+CPKC  S L+D FR    K+SRK
Sbjct: 130 EFS-----NKTIEDPSLILMGCSHCLIYVMVSEINPKCPKCNSSILIDIFRHRLGKKSRK 176

[Close]

BLAST of Csa6G046290 vs. TrEMBL
Match: A0A067DJ61_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047093mg PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 112 KSSNESKSSSPRSQDSCISAEVESNLNLED---NLRVESSP-LIVMGCTFCLLYVMVTDA 171
           +SSN+S++SSP+SQ SC+S ++  +   +    N R  + P LI+MGCT C +YVMV++A
Sbjct: 66  ESSNQSENSSPKSQRSCMSLDLNVSAQEDQESTNPRHANLPSLILMGCTHCYIYVMVSEA 125

Query: 172 DPRCPKCKRSGLLDAFRGNQVKRSRKN 195
           DP+CPKC  S LLD FR +  K+SRKN
Sbjct: 126 DPKCPKCSSSVLLDMFRESPAKKSRKN 152

[Close]

BLAST of Csa6G046290 vs. TrEMBL
Match: V4U9V0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017988mg PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 1


Query: 98  LDLKLSPPGVYSRGK-SSNESKSSSPRSQDSCISAEVESNLNLED---NLRVESSP-LIV 157
           L+L LSPP     G+ SSN+S++SSP+SQ SC+S ++  +   +    N R  + P LI+
Sbjct: 13  LNLSLSPPNGKPNGQESSNQSENSSPKSQRSCMSLDLNVSAQEDQESTNPRHANLPSLIL 72

Query: 158 MGCTFCLLYVMVTDADPRCPKCKRSGLLD 182
           MGCT C +YVMV++ADP+CPKC  S LLD
Sbjct: 73  MGCTHCYIYVMVSEADPKCPKCSSSVLLD 101

[Close]

BLAST of Csa6G046290 vs. TrEMBL
Match: V7BAG3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G024000g PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-12
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 71  KSDTDKKETKRRYAVETGTAANQ--NDAYLDLKLSPPGVYSRGKSSNESKSSSPRSQDSC 130
           K +   K+ K+R  +E G    +   +  L+LKLSPPG  S    S +       S+ +C
Sbjct: 4   KVEAASKQGKKRSLIEIGINEYEVCGEIDLELKLSPPGSSSDNLLSAKRTPLPLSSERAC 63

Query: 131 ISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFR 185
           ++++++   NL+D  + E  PLI MGC  CL+YVMV+ A+P+CP C  S L++ F+
Sbjct: 64  LASKMDIGDNLDDGPKEELPPLIAMGCDLCLIYVMVSKANPKCPLCANSDLINQFQ 119

[Close]

BLAST of Csa6G046290 vs. TAIR10
Match: AT3G11600.1 (AT3G11600.1 unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 1


Query: 92  NQNDAYLDLKL--SPP----GVYSRGKSSNESKSSSPRSQDSCISAEVESNLNLEDNLRV 151
           N+N   L+L+L  SPP       S  +S N S ++SP    SC+S+E     N E+N  +
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP---SSCVSSET----NQEENETI 64

Query: 152 ESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 187
            S  ++++GC  CL+YVM++D DP+CPKCK + LLD  + N
Sbjct: 65  TS--MVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]

BLAST of Csa6G046290 vs. TAIR10
Match: AT5G06270.1 (AT5G06270.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 1


Query: 98  LDLKLSPPGVYSRG--KSSNESKSSSPRSQ-DSCISAEVESNLNLEDNLRVESSP----L 157
           L L LSPP    R   +S + S ++SP S   SC+S+E+  +   E ++R  +SP    +
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQD---EPSVRYSTSPETTSM 69

Query: 158 IVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 187
           +++GC  CL+YVM+++ DP+CPKCK + LLD    N
Sbjct: 70  VLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]

BLAST of Csa6G046290 vs. TAIR10
Match: AT3G52561.1 (AT3G52561.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.1e-06
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 1


Query: 107 VYSRGKSSNESKSS-SPRSQDSCISAEVESNLNLEDNL--RVESSPLIVMGCTFCLLYVM 166
           V + G+    S SS +  SQ+SC++   E    +  +     E+  ++VMGC  C++YVM
Sbjct: 21  VVANGRFEGRSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVM 80

Query: 167 VTDADPRCPKCKRSGLL 181
           V     RCPKCK + L+
Sbjct: 81  VLQERQRCPKCKCTDLI 97

[Close]

BLAST of Csa6G046290 vs. NCBI nr
Match: gi|778710434|ref|XP_011656573.1| (PREDICTED: uncharacterized protein LOC105435753 isoform X1 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60
           MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE
Sbjct: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS 120
           LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS
Sbjct: 61  LKDSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSS 120

Query: 121 SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL 180
           SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL
Sbjct: 121 SPRSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLL 180

Query: 181 DAFRGNQVKRSRKN 195
           DAFRGNQVKRSRKN
Sbjct: 181 DAFRGNQVKRSRKN 194

[Close]

BLAST of Csa6G046290 vs. NCBI nr
Match: gi|778710438|ref|XP_011656574.1| (PREDICTED: uncharacterized protein LOC105435753 isoform X2 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-102
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 1


Query: 5   PQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDS 64
           P DTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDS
Sbjct: 4   PLDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDS 63

Query: 65  SSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRS 124
           SSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRS
Sbjct: 64  SSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRS 123

Query: 125 QDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFR 184
           QDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFR
Sbjct: 124 QDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFR 183

Query: 185 GNQVKRSRKN 195
           GNQVKRSRKN
Sbjct: 184 GNQVKRSRKN 193

[Close]

BLAST of Csa6G046290 vs. NCBI nr
Match: gi|659113516|ref|XP_008456616.1| (PREDICTED: uncharacterized protein LOC103496521 isoform X3 [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 1.9e-98
Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 1


Query: 3   SKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELK 62
           +KP DTTQYLEHADAAKDCCGDDLES VHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELK
Sbjct: 2   TKPLDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELK 61

Query: 63  DSSSQTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSP 122
           DSS+ TMMKS+TDKKETKRRYAVETGTAAN+NDAYLDLKLSPPGVYSRGKSSNESKSSSP
Sbjct: 62  DSSNLTMMKSETDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSP 121

Query: 123 RSQDSCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDA 182
            SQDSCISAEVESNLN EDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDA
Sbjct: 122 SSQDSCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDA 181

Query: 183 FRGNQVKRSRKN 195
           FRGNQ+KRSRKN
Sbjct: 182 FRGNQLKRSRKN 193

[Close]

BLAST of Csa6G046290 vs. NCBI nr
Match: gi|659113510|ref|XP_008456612.1| (PREDICTED: uncharacterized protein LOC103496521 isoform X1 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 3.6e-97
Identity = 180/188 (95.74%), Postives = 184/188 (97.87%), Query Frame = 1


Query: 7   DTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSS 66
           DTTQYLEHADAAKDCCGDDLES VHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSS+
Sbjct: 14  DTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSN 73

Query: 67  QTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRSQD 126
            TMMKS+TDKKETKRRYAVETGTAAN+NDAYLDLKLSPPGVYSRGKSSNESKSSSP SQD
Sbjct: 74  LTMMKSETDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSPSSQD 133

Query: 127 SCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 186
           SCISAEVESNLN EDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN
Sbjct: 134 SCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 193

Query: 187 QVKRSRKN 195
           Q+KRSRKN
Sbjct: 194 QLKRSRKN 201

[Close]

BLAST of Csa6G046290 vs. NCBI nr
Match: gi|659113512|ref|XP_008456614.1| (PREDICTED: uncharacterized protein LOC103496521 isoform X2 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 3.6e-97
Identity = 180/188 (95.74%), Postives = 184/188 (97.87%), Query Frame = 1


Query: 7   DTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSS 66
           DTTQYLEHADAAKDCCGDDLES VHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSS+
Sbjct: 10  DTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSN 69

Query: 67  QTMMKSDTDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESKSSSPRSQD 126
            TMMKS+TDKKETKRRYAVETGTAAN+NDAYLDLKLSPPGVYSRGKSSNESKSSSP SQD
Sbjct: 70  LTMMKSETDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSPSSQD 129

Query: 127 SCISAEVESNLNLEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 186
           SCISAEVESNLN EDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN
Sbjct: 130 SCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAFRGN 189

Query: 187 QVKRSRKN 195
           Q+KRSRKN
Sbjct: 190 QLKRSRKN 197

The following BLAST results are available for this feature:

BLAST of Csa6G046290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE76_CUCSA	1.5e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046290 PE=4 SV=1	[more]
A0A061FQU0_THECC	4.1e-15	37.22	Uncharacterized protein OS=Theobroma cacao GN=TCM_044272 PE=4 SV=1	[more]
A0A067DJ61_CITSI	4.6e-14	50.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047093mg PE=4 SV=1	[more]
V4U9V0_9ROSI	3.3e-12	49.44	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017988mg PE=...	[more]
V7BAG3_PHAVU	4.3e-12	36.21	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G024000g PE=4 SV=1	[more]

BLAST of Csa6G046290 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11600.1	1.9e-11	40.59	unknown protein	[more]
AT5G06270.1	2.5e-11	39.58	unknown protein	[more]
AT3G52561.1	4.1e-06	35.06	unknown protein	[more]

BLAST of Csa6G046290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710434\|ref\|XP_011656573.1\|	2.1e-105	100.00	PREDICTED: uncharacterized protein LOC105435753 isoform X1 [Cucumis sativus]	[more]
gi\|778710438\|ref\|XP_011656574.1\|	2.9e-102	99.47	PREDICTED: uncharacterized protein LOC105435753 isoform X2 [Cucumis sativus]	[more]
gi\|659113516\|ref\|XP_008456616.1\|	1.9e-98	94.79	PREDICTED: uncharacterized protein LOC103496521 isoform X3 [Cucumis melo]	[more]
gi\|659113510\|ref\|XP_008456612.1\|	3.6e-97	95.74	PREDICTED: uncharacterized protein LOC103496521 isoform X1 [Cucumis melo]	[more]
gi\|659113512\|ref\|XP_008456614.1\|	3.6e-97	95.74	PREDICTED: uncharacterized protein LOC103496521 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU123311	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G046290.1	Csa6G046290.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU123311	CU123311	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33177	FAMILY NOT NAMED	coord: 98..186 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G046290	Cla013683	Watermelon (97103) v1	cuwmB457
Csa6G046290	MELO3C019908	Melon (DHL92) v3.5.1	cumeB474
Csa6G046290	ClCG08G008390	Watermelon (Charleston Gray)	cuwcgB497
Csa6G046290	Lsi08G006360	Bottle gourd (USVL1VR-Ls)	culsiB478
Csa6G046290	Cla97C08G151140	Watermelon (97103) v2	cuwmbB488
Csa6G046290	Bhi04G001311	Wax gourd	cuwgoB588
Csa6G046290	CSPI06G04080	Wild cucumber (PI 183967)	cpicuB314
Csa6G046290	Cucsa.364540	Cucumber (Gy14) v1	cgycuB511
Csa6G046290	CmaCh04G025090	Cucurbita maxima (Rimu)	cmacuB767
Csa6G046290	CmoCh15G005380	Cucurbita moschata (Rifu)	cmocuB297
Csa6G046290	CmoCh04G026260	Cucurbita moschata (Rifu)	cmocuB760
Csa6G046290	Cp4.1LG13g10580	Cucurbita pepo (Zucchini)	cpecuB197
Csa6G046290	CsGy6G004040	Cucumber (Gy14) v2	cgybcuB282
Csa6G046290	Carg15850	Silver-seed gourd	carcuB0066

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G046290	Cucurbita maxima (Rimu)	cmacuB308
Csa6G046290	Cucurbita pepo (Zucchini)	cpecuB459
Csa6G046290	Melon (DHL92) v3.6.1	cumedB456
Csa6G046290	Silver-seed gourd	carcuB0850