Csa6G023390 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G023390
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Vesicle transport protein GOT1B, putative; contains IPR007305 (Vesicle transport protein, Got1/SFT2-like)
Location	Chr6 : 2353154 .. 2361619 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTATGAATTGACTGAGCAAAAACGTGAGCATTATATTGCAATTTATTTGCAGCCTTAATGTGCTTCACTCATTTCTCTTTGGTTATATTATGGACACATCTTTTTAGTATTAAATATTCTCAATTCTTTGAAGTAGAATGGTCATCTTGAAAAATTAAGTTCATGGAGTTCCTTCTCTGTGTTGGTGGCTTCTTTTAGAAATTTGAGAATGTGTGTTGTTGGTTTGGATCTGCAATACATAGCAGCTAATAGCTGTATCTTCTTTGAAATGCAGGAGTTGGACTTGGGCTGATTGGTTTTGGCTTCTTTTTTACATTTTTGGCTGTAATCCTTTTCTTTGACAGGGGATTGCTTGCTTTAGGAAATGTAAGTCCCTTCGATAGTTTGATGTTGCTTTCTGTAGGTATCAGGATGCTGACTTTTCTGATGCTTTTGTTCCTCCATTACCCATCCTTTTTTATGTTTGAAAAAAACATATTTTATCAGATGTTTTGGTTAATCGGAGTGGCACTTTTACTTGGTTGGCATTCTACATGGAACCTATTTACCAGTCGAGCAAATTACAAGGTATGCCAAAGTACTTATCATGCTAGGAGGAGGTCTGGTCCCTTTCTAGGTTCCATACCCTTCTTTCGGTTCAGTAAATAAGGATTTATGTAACTTTTAGGTTTTGTTTTTGTTAGATTGGCCTTCTTTGTTTTACTTTGGCTCATACATCTGTTGCTCTTTATTTATTATTATTGTTTATTTCTTTTTTGAATGTCCTTTTTTTCTTTCATTCCTAATAAAAGCTTGGTTTCCATTAAAAGGAAAAAAGAAGACGCAAATCAAAGTACTTGTTATGTTTTTTTTATTAGATTTAAACATGGTTTTACATTTGGCATAGATTTGACGATGTTATAGGGATAGAATGGCAGGATGAAAAGTGTGGCATCAGGCATCATTAGTTAATTGCAAACGTTGACCATATAGATTTCTAGTAGATTGCTACATAAATTATTATGACTCATTAATTTTACGAGACCTTCCAAAGCCTATAGATTCCTTTAATTTATGTTTTAGTGGGTTCCTTCTAATAATTCTGTTAGATACCTAGATTAGTATAGGGTAAGGGTAAAAGGGTAATTAGATTTGTTGGTAATTAGTTGGTTATAAATAGAAAGTTGAGGAGGGAAGAAGGGTATGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTTGGTGAAGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCTTGAAAGAGAGGAAGGGCAGAGGGTTAGGGCTCTTTTACTTTTCTTTTACTGCTTTTATATTGTAATTCTGTTGAAGGTATCAATAAAATAGAAACACTATCTCTGTGTTCTATCAACTTCCTACATTGATCATGAACTCATTTGAATGTACATAAAAGAAAGTTGAAAGGTTTTGGTGAAATTTGAATAATTGGATAAAGTGTGTTTTACATAAATGTACGTTTATGTGAATGTGCATTTATATAGATATGGATATTTATTTTTGTAAAGGATAGAGATATCATCATCGAAAGATACTTCTCAAAGGGATCATAGCTTAAAAGATAACATAATTTTCTCAAGTTATGTAGGGAGTGTATAAAAGGCTGATTTTACTAATTTTTGGAAGCCATGGATGTTTTCACGTTTTTTATTCTCTCTTTTTCTCGTAAGGTTACATGTACTTATGAGCACTTGTATCTTTTCAATATTTCAATGAAAATTTTGTTTCCTCGGAAAGAAAATTTGGCAGCCATGGATGGAAAACACTGGGTCCACTTCCAAAAATCTTCATAGAGACAGCTTAACTATACCAGAATGGATGAAGATTAATACTTCTATTTCATTATTTGTCAACATTTTTTTATTCTTTGATTGTAGTTGCCCCATCTTTAATCATTACCAATTTGTGAGTTTTTTTTATGTGTTTGTTTTTCATTTGGCAATCTCTTGACTTTCAATATAGGGAGGATGCATGGTCCTTTCCCAACAATTTTTATATCCTTTTATTTTCTAATAGGAATTGTCTGTTTCCTTTCGTTGGAGTTCTTGGTATCACACCAATTCAATCATGGTTCTTTGGGTTTTTGGCTATGGATCTCTTGTATGGAATCCAAGATTTGACTTCGATGAGTAAGTGATAGGTTTCATTAGAGATTATAGATGTGTGTTTGATCTTGCTTGTATTGATCATAGAGGTAAACCTGAAAATCCTGCTAGAACTTCCACTCTAGAACCCAAAGAAGGATCAATTTGCTGGGGTGCTGAATTTTGCATCCGTGGAGGTCCTGAAAGAGAGAGAGAGAGGCCATGGAGTATCCAAAGAAGAGAGAGTGCGAGTATGATCAAAAGACTATTGTGGACTTCTACAAGGATGAGGACTCCATGGAACCCACATTGACAGAAGTTTTAGTTTTCACATCTACATTTGATAAAGTGCTAAACAAATACTATCTAGGACCAGCTCCCTTGGAGCAAATGGCTAGCCAAATTGCAACTGCATCTAGTCCATGTGGGAACAATAGAGACTATCTATTCCGGTTGGAAAAGGCCTTGTTTGATATTGGCCACGAAGACGATATGGTGATTGAGCTGGCAAACGAAGTGAGGAATATCCTTGGGAAGGTTGGGAAGGGGGATGGTTTTGAAGGAGAAGAAGAAGCCGATTGGACCAACAATGACGACCCACCTGCCGTTCATGTCCTTCATTTTTGGTGTTCAGGTGCACCGATGGCAGATGCCACCGTTGCCATGGATTCTTAGCAATTATCGACTGATTGATGTAGTGAAAAAGGTGGAAAGTTAAGCTAACTCAAGAGCTAAGAAGATTAGGCATTTGGATTTTTATTGTTTGCCACGCTTCTTTCTTCGGCACTCTCTCATTGAAGCTTCTTTGGTTCATTTATGATTTACACTGCTGTTTCTGATCTGACCCCAATTAGGTTTGTTGTTCTTTTACGTACTTAGAGCTGTATCAGCGCCTAGGTTTTGGCTCTTTTAAAGATCAAAGGTTTCCTCACACTTCCCATTTCTTCCATTAATGAGCGTTTTTTCATAGTTGAAATTACTTAGAGCATTAGGTACTAATAGTTGAATGTACACTCTATGTTATGGAACTGATCTTACTTTTATTGGTTAAATACAAAATCAAATTACCGTTTGTTTGCTTCAAAAAAAAAAAAAAAAAGAATAAACATAATCCATATGTTGAAATGTCATGGAGTTGAAGTATCTTTAATAATTTTTCAGGGTTCTGCATCATTTCTTCTCGGCCTCTTCTTCATTTTTGTTCGCTGGCCCATAATTGGCATACTTTTGGAGATTTGTGGCTGCTTTCTTCTCTTTGGGTTAGTTTCTTATCCAAATTTGGAACTATGAGCTTGATATCAATAACATCTCTCTTACACGCTGATGTCTCTAATGTAGTGGTTTTTGGCCCTCAATTAAAGGATTTTTGTACCAGATTCCAGTTCTTGGATGGGTTCTTCCGTACCCCATCATGGTAAGCTTTAGTTACATTGTTTCACATGCCTCTTAGATTTGTTAGTTCATTGGTCATATCTCTTTGAAAATGATTTATTAGCATAATTCATTCCTGGTCGATATTAGCCATTACAAGTGGACAATGTTATATGCTTCTCCTTGTGGTAGCACTGTGTAATTTTTTAATAAATTTGGTTTCCTGAAATTAACTCTTTTTCTTTTTTTTTTTCTTTTGTTATACTTGAGAGTTATTTGCCAATTGCAACCGCCATTTTTGGTAGGGCTTGGATCGGAGGTGGTGGGACATCCTTACCCCCCGAAGATATGTCGATGAGCTTCGCACGGTTTGACAACGACCAACTTGACTAACTACTCGTGGTGGTAAGATGACTATCGTCAAAACCTTATGTAGTTTTCCATTCAGAGACATGGCAGATTAGAAAGATAGGTTTGACGTAATTGGCCAACCAAGATGTGACGGTGTAGGAATTGGAGCATAAGGTATCTGGGTCGATGTTCGTCACCCTACAAGCAACAAGTGCATGTGAACACACGATTTCATATTAACCAAACTCCCCGCACATGCAAGTCCTTTCGTGTAAATTGACGTGAGGGTTTAGATGACAGTCTACAATCTCTAACTTGTGGTGATCAATTGGGCGCACTACGTATGTACCTTCTAGACTTCAAATCAGCTAGCTTCAGTAGGGGCACTCCCCGTGGTCAGACAATACTGACTCTCGTCTTGATGCTATTTCCCTACGTTTGGAGAACCATTCTTGGTGCATAGCTCTAATGTGGTCCAAGAAAGCGGTGATTGGTAGTGCTTGCACGTTCTTTAAAACTGCGTTGATACAGTATCCGATATTAGTAGTCATCTGATCTATCGCATGCCACCCTGGTATACACGGGCCCACCTCGACAACCTTATGTTGGTCAGATACCTTTGAACTCCCCTGTACGGTGCCGACTTGTTTCAGTAATACTGAAACACTGATTCGCTACATGCTTTGGCGGCTAACATGAAATTCGCACACACGTTATCATTGTTGAATTTCATCGTTAGGTTCAAGCTCAAATGATGGATACACAGTGCGTGGAAATTATCTGGGAAGACTAGCGCGATGGATTTGACAATACTCTTATGGCGATCAGATACAAACACTAGCCCATTGACAGTGCCGATAGTTTTCGTAAATTTCTCATGAACCACTACATGATTCATCATTTTACTTACCACCCAACCCAAAAGCCACCTAATATACTTGCTTATTAGCGTCAATGGACACCGCTATGAGCATGACACCCTTATACTTCCCCTTGCAGTGTGCAACATCAACCATCAAAACTGGCCTAATGCAGTTTACAAAACCTCCAATAGATGCTCCAAGTGCTATATACACATAATTGAAATGACCATCGAGCTCCACCTCCAAATCGTATTGAGTACTCAGGTTAGTAATCTTCAACGCTTCCCCATACCGACCTAACAAAGTGTAGGATTTTCTTGGGGACCCTCTTACCATATAGCTTCTTGAGCCTTCCTCGCCCTTTCGTACGACAAGTTTATGCCAAATTCCTTTCGAAAATCCTGAATTATTTTCTTGGGCCTATCAGCATGACTAACATCTTGGTAATTGGACTGGATTAGTTTGGCTATGATCCAACTCTTTGCTTGCTTGTGATCTTGTTTTCTCATATTTTTTTGGCATGTGTGCATACTCTCATACTTAGAAACTTTGAAAACTCAAAATCTTTCAATTTTTTCGCCGTTAGTTTCCACAAACAAGCAAAATCGGAGCATCTAAGGACATTTCTTGTTCGATCTATGGACACGAAATTGAAAGATAAAGTTTCTTCGCCACATATTTCTTATTTAAAAACAAGTAACCGACCTGTACATCTTCGAGGTATGACTCAGCTGAGATGTAAATAGTGCGTTCCAACAATTTTTCGACACGCTTTCGCCTTTTGACACTCATTGATGGAGGTTTGTCGTCACTGTCCACTAGTCCCTCTAACTGAGCACCGTGATCCATCAGTTTACTAGACTTACCCAGCTGTCTTCTTTCTTCACTTGATTGTATACTAAAAGTGCATTCAACCTCTGTTGCCATCGGTATATGATTAATGTCTATCAATTCAATATTGGTTCCAGGATGAGTATTGGCATCCGAATCACACACATTTAATGCATCAACATCATAGGTATTTATCTGTACTGTCATTACCAAGATTTCGGGCAGTTAAAGTTGATCCTTCGGGTTCAGAGTTTGTAGACATTCCTAACATTAGTTTCTTCCTACTTTATTCTCTTACTTGTACAAAAACTTCTCTGATATTAGGTAAGGGTTTTATAGCTAAGATTCTACAACATACCTCATCTAATTCTTTATTAAAGATCAAGGAGAAATTTAAACACTCGTATCTTCTCAGCGATCTTTTTGTATGTGGCTACATCTGCACTGCATTCCCACTCGTGGTTTTCAAATACATCAAATTGCTGCCAAAGTTGGGACAATTGAGTGAACTAGTAACTTGCATATCCCCGTGTCGTAGCTCGTGAATTTTGCCTTCAATTTCAAATGATTCTGCTATATTTTTTCTTTTATTGGAATAGGTTGCGCAAGCTGCTTGCCATATTTCGCTGGTAGTTGAGAAGAGTAGAAATCCTTTGCCAATCTCTATTGTCATGGAGTTGATTAGTGATGTAGTCTAAGTAACCTCAAGGAGAAATCTTCCAAAAACCAAGATAGTGGATCTTTTATTAGAATGAATAATGTGCTTCATACAGGAAGAGAAAACTTACCAGAGGAGGTAAAAGGGAATTAACCTAGAATATTTCCTAATTATCCTAAACCCTAAACCCAAATAACTATATTATTTTCGGCTTTCCATGTCCTATATTTTTTATTAACTTGGATGAGATTTTTGCTTGACAGATTATCTTTTCCTTTGACAGAGATAATTCCTTCCATTTAATTTGTGATTAGTGATTGGAAGTATGGTCCCTTCAGCGTTGTTAGAATTTGCTAATGCCATGAAGAAACTGAGGGAATAAAATGGAAAAAATTGGTAAAAAACAGCCTTCAAGACCCGACAGAGCCCTGACCCGTTTTTGGTTGTACTTGATCCGGTTGGATAAGTTGACCCACTTGGACCTAGATACATTCTCGATATGCCTGTCCCAATTAGATATTCTGACTCGCTTGAACCTGAAACAGGCGTTATCTGATGTGCACTATTTCGCTAACTCAGTCAATTTGAATCAGACAGTGATTTGATGTGCACAATTTCGGTCATTAGATTTTCTGATCTCCTTGTACATACACAATTGTGAAGTACCAATTTGCCTGACCAGGTTGATGTGAGTTGTTTCAAGTGTGAAGTTTCCGATTTGGGACACTTCAATTGGCTGGTCGAAATAATTTGATGCAGGCTTGGCCGATTGGAGAGATGATTCTTCATGGATTTGCTTCAGACGTGAAGCTCAAGGTGATCGATGGTTGTTTGAGGATGCAACGATTTAAGCAAACTGGTGTGTTGTTGGAAGTTTCAGCTCTATTATTTTTTGCTGGGGTGTTTCAGACGTGAGTGAAACCTATAAGAGGAATTCAGAGAGTAGGCTCTGATACCATATAGAAATATGAATTAGCGAGATTCTTCTTATTTCTTACAAAAGGAGGAAACCCTAATATATATACCATGATAAATGTCTAATATGGAAAAACACTTAACAGTAAAAAGACTAATACATAAGGCAAGAATGTTACAGTGAGTGAAGGTAAATAATTGCTGGAAATAACATTCCAAAGAGATGGGGAAAGGAGAAAAATTTCCATATTCAACAGTTTTAACATCTCTTTTATGTGGTTTTCTTTTGTTTTAGACGCTTTTGTATATTGTCCATTTGTTTACATTTGTTTAACTGAAATGCAATTTTTTCATAACTATTAAAACCAAATGAAAGATAGAAAAGAGGTTGCTAGGTGATCTAAGCAACTCATTCAAGAAAAAGACGATCCAATTGGCTGAGATTGATTAAGCAAAATAAAAGTTACGACAGAGGAACATGAAAATGCGTTAAAAAAGTCTATACAAAGTGAAAGTCCACGAACACTTGATTTTTATTTTGCTAAATGGAGAGAACTTGGACGCCTTTTCTTTAATTATCAAGCATGCACATAAAGACTTAAAAAACTAGTGAGCTTACAACCTTCCTAGACTCGTCCGTCTGTCAGTTAAGCCAAATAACACAATCTATATGGGAGATCAGCCTAGTCTAAACCTGCCTAAAAGGTGTCTCATCTGTTCAATGCTTCTTTTCAAAAGTATCCTTTTTTCTACCTCACGATGGGATGGGTTTTTGACATGTGGAGGAATGGGGATATTGTTTATCCATGAACATGGCTAACAATTTGAGTTACTTTGGTCCATTTTGTCTGTTTGTTACTGATTTCCCCCCCTTTTTTCTTTCTATTTTGGGAATTAATCTGGTTTATTATCTCTCTCTGTTAATTATATTGTGGTCTATTTGAAATTTTAGCCAAATTTTGATGTACGTAATATATTGTTTTGACACTTAACATGTAGCTTTGATTTTAAACATACTTGTAGGACCATAGCTCAAAACTATAAGTGAACGAAGGCTAAATTTTAACATAGAGAATATAAGAATGTGGTCATGATCAAACAGATAGGATTTCAGATTTTTGTATTTCTAATTTACCCTTCAACAATTAGGTAATTTGTTTGGCTCTTAAGTGCTAACAGTTGACTATTCCAGATTCTCGAAAGTCTGTGGAGGGGCTCTGGGTGA

mRNA sequence

ATGGCCTATGAATTGACTGAGCAAAAACGAGTTGGACTTGGGCTGATTGGTTTTGGCTTCTTTTTTACATTTTTGGCTGTAATCCTTTTCTTTGACAGGGGATTGCTTGCTTTAGGAAATATGTTTTGGTTAATCGGAGTGGCACTTTTACTTGGTTGGCATTCTACATGGAACCTATTTACCAGTCGAGCAAATTACAAGGGTTCTGCATCATTTCTTCTCGGCCTCTTCTTCATTTTTGTTCGCTGGCCCATAATTGGCATACTTTTGGAGATTTGTGGCTGCTTTCTTCTCTTTGGTGGTTTTTGGCCCTCAATTAAAGGATTTTTGTACCAGATTCCAGTTCTTGGATGGGTTCTTCCGTACCCCATCATGATTCTCGAAAGTCTGTGGAGGGGCTCTGGGTGA

Coding sequence (CDS)

ATGGCCTATGAATTGACTGAGCAAAAACGAGTTGGACTTGGGCTGATTGGTTTTGGCTTCTTTTTTACATTTTTGGCTGTAATCCTTTTCTTTGACAGGGGATTGCTTGCTTTAGGAAATATGTTTTGGTTAATCGGAGTGGCACTTTTACTTGGTTGGCATTCTACATGGAACCTATTTACCAGTCGAGCAAATTACAAGGGTTCTGCATCATTTCTTCTCGGCCTCTTCTTCATTTTTGTTCGCTGGCCCATAATTGGCATACTTTTGGAGATTTGTGGCTGCTTTCTTCTCTTTGGTGGTTTTTGGCCCTCAATTAAAGGATTTTTGTACCAGATTCCAGTTCTTGGATGGGTTCTTCCGTACCCCATCATGATTCTCGAAAGTCTGTGGAGGGGCTCTGGGTGA

Protein sequence

MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVLPYPIMILESLWRGSG*

Homology

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BLAST of Csa6G023390 vs. Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.1e-27
Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 1


Query: 5   LTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRA 64
           LT+ +++G+GL GFG FF F  +ILFFD+ LLA+GN+ ++ G+A ++G   T+  F  R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 65  NYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVLPYP 124
             K +  FL G+F + + WP+IG++ EI G FLLF GF+P + GF+ ++PVLG +L  P
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

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BLAST of Csa6G023390 vs. Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 53/119 (44.54%), Postives = 80/119 (67.23%), Query Frame = 1


Query: 5   LTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRA 64
           LT+ +++G+GL GFG FF F  +ILFFD+ LLA+GN+ ++ G+A ++G   T+  F  + 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 65  NYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVLPYP 124
             K +  FL G+F + + WP+IG++ EI G FLLF GF+P + GF+ ++PVLG +L  P
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

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BLAST of Csa6G023390 vs. Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 53/119 (44.54%), Postives = 80/119 (67.23%), Query Frame = 1


Query: 5   LTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRA 64
           LT+ +++G+GL GFG FF F  +ILFFD+ LLA+GN+ ++ G+A ++G   T+  F  + 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 65  NYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVLPYP 124
             K +  FL G+F + + WP+IG++ EI G FLLF GF+P + GF+ ++PVLG +L  P
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLP 122

[Close]

BLAST of Csa6G023390 vs. Swiss-Prot
Match: GOT1A_MOUSE (Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.9e-21
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 5   LTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRA 64
           +TE +++G+G+ GFG FF    ++L+FD  LLA GN+ +L G++L++G   T+  F  R 
Sbjct: 4   ITEWQKIGVGITGFGVFFILFGILLYFDSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRH 63

Query: 65  NYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFL---YQIPVL 117
             KG++ FL G+  + +RWP++G+LLE  G   LF GF+P + GFL   + IP L
Sbjct: 64  KLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFL 118

[Close]

BLAST of Csa6G023390 vs. Swiss-Prot
Match: GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21
Identity = 45/106 (42.45%), Postives = 69/106 (65.09%), Query Frame = 1


Query: 5   LTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSRA 64
           +TE +++G+G  GFG FF    ++L+FD  LLA GN+ +L G++L++G   T++ F  R 
Sbjct: 4   ITEWQKIGVGTTGFGIFFILFGMLLYFDSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRH 63

Query: 65  NYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFL 111
            +KG++ FL G+  + +RWP++G+ LE  G F LF GF+P   GFL
Sbjct: 64  KFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFL 109

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BLAST of Csa6G023390 vs. TrEMBL
Match: A0A0A0KAR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G023390 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.6e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF
Sbjct: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL
Sbjct: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120

Query: 121 PYPIMILESLWRGSG 136
           PYPIMILESLWRGSG
Sbjct: 121 PYPIMILESLWRGSG 135

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BLAST of Csa6G023390 vs. TrEMBL
Match: B9SYF6_RICCO (Vesicle transport protein GOT1B, putative OS=Ricinus communis GN=RCOM_0119500 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.4e-56
Identity = 100/133 (75.19%), Postives = 118/133 (88.72%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYEL EQK++GLGLIGFG  F+FL V+LFFDRGLLALGN+FWL GVA+LLGWHSTWNLF
Sbjct: 1   MAYELNEQKKIGLGLIGFGILFSFLGVLLFFDRGLLALGNIFWLTGVAILLGWHSTWNLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+RANYKG+ SFLLGLFFIFVRWPI+GI+LEI GC  LFGGFWP++K FLYQIPV+GW++
Sbjct: 61  TNRANYKGTISFLLGLFFIFVRWPIVGIVLEIYGCIALFGGFWPTVKVFLYQIPVVGWII 120

Query: 121 PYPIMILESLWRG 134
            YP+++L  L  G
Sbjct: 121 QYPVLLLGRLRGG 133

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BLAST of Csa6G023390 vs. TrEMBL
Match: A0A059AW55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00434 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-55
Identity = 99/135 (73.33%), Postives = 119/135 (88.15%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MA+E+ EQK++GLGLIGFG FF+FL V+LFFDRGLLALGN+ WL GVA LLGW+STW +F
Sbjct: 1   MAFEMDEQKKIGLGLIGFGIFFSFLGVLLFFDRGLLALGNILWLAGVAFLLGWYSTWKIF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           ++RANYKGSASFLLGLFFIFVRWPI+GI+ E+ GC +LFGGFWPS+K FLYQIPVLGW++
Sbjct: 61  SNRANYKGSASFLLGLFFIFVRWPILGIIFELYGCIVLFGGFWPSVKVFLYQIPVLGWII 120

Query: 121 PYPIMILESLWRGSG 136
            YPI++L  L  GSG
Sbjct: 121 QYPILLLGRLGGGSG 135

[Close]

BLAST of Csa6G023390 vs. TrEMBL
Match: A0A061EKK3_THECC (Got1/Sft2-like vescicle transport protein family OS=Theobroma cacao GN=TCM_020074 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.1e-54
Identity = 100/134 (74.63%), Postives = 118/134 (88.06%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           M YE+TEQK++GLGLIGFG FF+FL VILFFDRGLLALGN+F L GVA+L+GW+ST  LF
Sbjct: 70  MVYEITEQKKIGLGLIGFGIFFSFLGVILFFDRGLLALGNIFCLAGVAILIGWYSTLQLF 129

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+R NYKGSASFLLGLFF+FVRWPI+GI+LEI GC +LFGGFWPS++ FL QIPV GWV+
Sbjct: 130 TNRKNYKGSASFLLGLFFLFVRWPIVGIILEIYGCIVLFGGFWPSVRVFLCQIPVFGWVI 189

Query: 121 PYPIMILESLWRGS 135
            YP+MIL+ L RGS
Sbjct: 190 QYPVMILDRLRRGS 203

[Close]

BLAST of Csa6G023390 vs. TrEMBL
Match: B9IAD7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14910g PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-54
Identity = 97/134 (72.39%), Postives = 113/134 (84.33%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYE+ E K++GLGLIGFG FFTFL  +LFFDRGLLALGN+FWL GVA+LLGW STW LF
Sbjct: 1   MAYEINELKKIGLGLIGFGIFFTFLGALLFFDRGLLALGNIFWLSGVAILLGWRSTWKLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+R NYKGS  FLLGLFFIFVRWP++GI+ EI  C  LFGGFWPS+K FLYQIPV+GW++
Sbjct: 61  TNRENYKGSVCFLLGLFFIFVRWPVVGIIFEIYSCIALFGGFWPSVKVFLYQIPVVGWII 120

Query: 121 PYPIMILESLWRGS 135
            YPI +L+ L RGS
Sbjct: 121 QYPITLLDYLRRGS 134

[Close]

BLAST of Csa6G023390 vs. TAIR10
Match: AT1G05785.1 (AT1G05785.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 203.8 bits (517), Expect = 7.0e-53
Identity = 92/134 (68.66%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           M YE+TEQK+VGLGLIGFG  FTFL VIL+FDRGLLALGN+FWLIGV LLLGW STW +F
Sbjct: 1   MVYEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+  N +G+  F+LGLF IFVRWPIIGI+LEI G  +LFGGFW ++K FL QIP +GW++
Sbjct: 61  TNVNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWII 120

Query: 121 PYPIMILESLWRGS 135
            YP+M+LE L RG+
Sbjct: 121 QYPLMVLEQLVRGA 134

[Close]

BLAST of Csa6G023390 vs. TAIR10
Match: AT3G49420.1 (AT3G49420.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-36
Identity = 61/123 (49.59%), Postives = 90/123 (73.17%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           M++E+ ++K++GLGL GFG FF+FL ++  FD+GLLA+GN+ ++ GV+L +G+ ST   F
Sbjct: 2   MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
             R NYKG+ SF +G FF+ + WPI+G++LE  G F+LF GFWP++  F  +IPVLGW++
Sbjct: 62  MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query: 121 PYP 124
             P
Sbjct: 122 QQP 124

[Close]

BLAST of Csa6G023390 vs. TAIR10
Match: AT5G01430.1 (AT5G01430.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-36
Identity = 61/123 (49.59%), Postives = 90/123 (73.17%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           M++E+ ++K++GLGL GFG FF+FL ++  FD+GLLA+GN+ ++ GV+L +G+ ST   F
Sbjct: 2   MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
             R NYKG+ SF +G FF+ + WPI+G++LE  G F+LF GFWP++  F  +IPVLGW++
Sbjct: 62  MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query: 121 PYP 124
             P
Sbjct: 122 QQP 124

[Close]

BLAST of Csa6G023390 vs. TAIR10
Match: AT3G03180.1 (AT3G03180.1 Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 134.8 bits (338), Expect = 4.0e-32
Identity = 65/131 (49.62%), Postives = 85/131 (64.89%), Query Frame = 1


Query: 4   ELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLFTSR 63
           E+ + K++GLGL GFG FFTFL VI  FD+GL+A+GN+ +L GV L +G +     FT R
Sbjct: 5   EMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQFFTKR 64

Query: 64  ANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVLPYP 123
            N+KG+ SF LG   +   WPI G+LLE  G  +LF GFWP++  FL +IP+LGW+L  P
Sbjct: 65  QNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWLLQQP 124

Query: 124 -IMILESLWRG 134
            I  L   +RG
Sbjct: 125 YIRSLLDRYRG 135

[Close]

BLAST of Csa6G023390 vs. NCBI nr
Match: gi|449441157|ref|XP_004138350.1| (PREDICTED: vesicle transport protein GOT1B [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 5.2e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF
Sbjct: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL
Sbjct: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120

Query: 121 PYPIMILESLWRGSG 136
           PYPIMILESLWRGSG
Sbjct: 121 PYPIMILESLWRGSG 135

[Close]

BLAST of Csa6G023390 vs. NCBI nr
Match: gi|659089657|ref|XP_008445629.1| (PREDICTED: vesicle transport protein GOT1B [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-72
Identity = 131/135 (97.04%), Postives = 135/135 (100.00%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGN+FWLIGVALLLGWHSTWNLF
Sbjct: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNIFWLIGVALLLGWHSTWNLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCF+LFGGFWPSIKGFLYQIPVLGW+L
Sbjct: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFVLFGGFWPSIKGFLYQIPVLGWIL 120

Query: 121 PYPIMILESLWRGSG 136
           PYPI+ILESLWRGSG
Sbjct: 121 PYPIVILESLWRGSG 135

[Close]

BLAST of Csa6G023390 vs. NCBI nr
Match: gi|802560021|ref|XP_012066244.1| (PREDICTED: vesicle transport protein GOT1B isoform X1 [Jatropha curcas])

HSP 1 Score: 226.5 bits (576), Expect = 2.8e-56
Identity = 101/134 (75.37%), Postives = 118/134 (88.06%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYEL EQK++GLGLIGFG FFTFL V+LF DRGLLALGN+FWL GVA+LLGW STW LF
Sbjct: 1   MAYELNEQKKIGLGLIGFGIFFTFLGVLLFCDRGLLALGNIFWLTGVAILLGWQSTWKLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+RANYKGS SFLLGLFFIFVRWPI+GI+L+I GC  LFGGFWPS+K FLYQIPV+GW++
Sbjct: 61  TNRANYKGSVSFLLGLFFIFVRWPIVGIILQIYGCIALFGGFWPSVKVFLYQIPVIGWII 120

Query: 121 PYPIMILESLWRGS 135
            YP+++L+ L  GS
Sbjct: 121 QYPVLLLDRLRGGS 134

[Close]

BLAST of Csa6G023390 vs. NCBI nr
Match: gi|255580396|ref|XP_002531025.1| (PREDICTED: vesicle transport protein GOT1B [Ricinus communis])

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-56
Identity = 100/133 (75.19%), Postives = 118/133 (88.72%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MAYEL EQK++GLGLIGFG  F+FL V+LFFDRGLLALGN+FWL GVA+LLGWHSTWNLF
Sbjct: 1   MAYELNEQKKIGLGLIGFGILFSFLGVLLFFDRGLLALGNIFWLTGVAILLGWHSTWNLF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           T+RANYKG+ SFLLGLFFIFVRWPI+GI+LEI GC  LFGGFWP++K FLYQIPV+GW++
Sbjct: 61  TNRANYKGTISFLLGLFFIFVRWPIVGIVLEIYGCIALFGGFWPTVKVFLYQIPVVGWII 120

Query: 121 PYPIMILESLWRG 134
            YP+++L  L  G
Sbjct: 121 QYPVLLLGRLRGG 133

[Close]

BLAST of Csa6G023390 vs. NCBI nr
Match: gi|702433148|ref|XP_010069349.1| (PREDICTED: vesicle transport protein GOT1B isoform X2 [Eucalyptus grandis])

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-55
Identity = 99/135 (73.33%), Postives = 119/135 (88.15%), Query Frame = 1


Query: 1   MAYELTEQKRVGLGLIGFGFFFTFLAVILFFDRGLLALGNMFWLIGVALLLGWHSTWNLF 60
           MA+E+ EQK++GLGLIGFG FF+FL V+LFFDRGLLALGN+ WL GVA LLGW+STW +F
Sbjct: 1   MAFEMDEQKKIGLGLIGFGIFFSFLGVLLFFDRGLLALGNILWLAGVAFLLGWYSTWKIF 60

Query: 61  TSRANYKGSASFLLGLFFIFVRWPIIGILLEICGCFLLFGGFWPSIKGFLYQIPVLGWVL 120
           ++RANYKGSASFLLGLFFIFVRWPI+GI+ E+ GC +LFGGFWPS+K FLYQIPVLGW++
Sbjct: 61  SNRANYKGSASFLLGLFFIFVRWPILGIIFELYGCIVLFGGFWPSVKVFLYQIPVLGWII 120

Query: 121 PYPIMILESLWRGSG 136
            YPI++L  L  GSG
Sbjct: 121 QYPILLLGRLGGGSG 135

The following BLAST results are available for this feature:

BLAST of Csa6G023390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GOT1B_MOUSE	8.1e-27	45.38	Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=1 SV=1	[more]
GOT1B_BOVIN	1.8e-26	44.54	Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1	[more]
GOT1B_HUMAN	1.8e-26	44.54	Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1	[more]
GOT1A_MOUSE	3.9e-21	41.74	Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1	[more]
GOT1A_BOVIN	6.6e-21	42.45	Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1	[more]

BLAST of Csa6G023390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAR8_CUCSA	3.6e-74	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G023390 PE=4 SV=1	[more]
B9SYF6_RICCO	3.4e-56	75.19	Vesicle transport protein GOT1B, putative OS=Ricinus communis GN=RCOM_0119500 PE...	[more]
A0A059AW55_EUCGR	1.3e-55	73.33	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00434 PE=4 SV=1	[more]
A0A061EKK3_THECC	4.1e-54	74.63	Got1/Sft2-like vescicle transport protein family OS=Theobroma cacao GN=TCM_02007...	[more]
B9IAD7_POPTR	5.4e-54	72.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14910g PE=4 SV=1	[more]

BLAST of Csa6G023390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05785.1	7.0e-53	68.66	Got1/Sft2-like vescicle transport protein family	[more]
AT3G49420.1	3.5e-36	49.59	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	3.5e-36	49.59	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	4.0e-32	49.62	Got1/Sft2-like vescicle transport protein family	[more]

BLAST of Csa6G023390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441157\|ref\|XP_004138350.1\|	5.2e-74	100.00	PREDICTED: vesicle transport protein GOT1B [Cucumis sativus]	[more]
gi\|659089657\|ref\|XP_008445629.1\|	1.3e-72	97.04	PREDICTED: vesicle transport protein GOT1B [Cucumis melo]	[more]
gi\|802560021\|ref\|XP_012066244.1\|	2.8e-56	75.37	PREDICTED: vesicle transport protein GOT1B isoform X1 [Jatropha curcas]	[more]
gi\|255580396\|ref\|XP_002531025.1\|	4.8e-56	75.19	PREDICTED: vesicle transport protein GOT1B [Ricinus communis]	[more]
gi\|702433148\|ref\|XP_010069349.1\|	1.8e-55	73.33	PREDICTED: vesicle transport protein GOT1B isoform X2 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007305	Vesicle_transpt_Got1/SFT2

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU099100	cucumber EST collection version 3.0	transcribed_cluster
CU121429	cucumber EST collection version 3.0	transcribed_cluster
CU150928	cucumber EST collection version 3.0	transcribed_cluster
CU153051	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G023390.1	Csa6G023390.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU099100	CU099100	transcribed_cluster
CU121429	CU121429	transcribed_cluster
CU150928	CU150928	transcribed_cluster
CU153051	CU153051	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 20..114 score: 2.0
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 1..126 score: 2.1
None	No IPR available	PANTHER	PTHR21493:SF97	GOT1/SFT2-LIKE VESCICLE TRANSPORT PROTEIN	coord: 1..126 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G023390	MELO3C011507	Melon (DHL92) v3.5.1	cumeB476
Csa6G023390	ClCG08G004020	Watermelon (Charleston Gray)	cuwcgB504
Csa6G023390	Lsi08G003290	Bottle gourd (USVL1VR-Ls)	culsiB475
Csa6G023390	MELO3C011507.2	Melon (DHL92) v3.6.1	cumedB455
Csa6G023390	Cla97C08G147340	Watermelon (97103) v2	cuwmbB490
Csa6G023390	Bhi04G001675	Wax gourd	cuwgoB581
Csa6G023390	CSPI06G02940	Wild cucumber (PI 183967)	cpicuB314
Csa6G023390	CmaCh17G005800	Cucurbita maxima (Rimu)	cmacuB377
Csa6G023390	CmoCh17G005640	Cucurbita moschata (Rifu)	cmocuB367
Csa6G023390	Cp4.1LG12g04960	Cucurbita pepo (Zucchini)	cpecuB148
Csa6G023390	CsGy6G003020	Cucumber (Gy14) v2	cgybcuB282
Csa6G023390	Carg22620	Silver-seed gourd	carcuB0249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G023390	Cucumber (Gy14) v1	cgycuB511
Csa6G023390	Cucurbita maxima (Rimu)	cmacuB912
Csa6G023390	Cucurbita moschata (Rifu)	cmocuB898
Csa6G023390	Watermelon (97103) v1	cuwmB476
Csa6G023390	Cucurbita pepo (Zucchini)	cpecuB334
Csa6G023390	Silver-seed gourd	carcuB0094