Csa6G004610 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G004610
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 438415 .. 438735 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGGTATTGGGTTATGTTGTTCGGTTTGGATCAAATTGAAGTGTTGATGAATTGTTTTGCTAGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTCGCTGTCGCTGATGTTGACATGTGA

mRNA sequence

ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTCGCTGTCGCTGATGTTGACATGTGA

Coding sequence (CDS)

ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTCGCTGTCGCTGATGTTGACATGTGA

Protein sequence

MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANRSSCEGDAILFILKFHLCIFAVADVDM*
Homology
[Close]
BLAST of Csa6G004610 vs. TrEMBL
Match: A0A0A0K7G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004610 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.1e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60
          MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60

Query: 61 SSCEGDAILFILKFHLCIFAVADVDM 87
          SSCEGDAILFILKFHLCIFAVADVDM
Sbjct: 61 SSCEGDAILFILKFHLCIFAVADVDM 86

[Close]
BLAST of Csa6G004610 vs. NCBI nr
Match: gi|700190466|gb|KGN45670.1| (hypothetical protein Csa_6G004610 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.0e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60
          MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60

Query: 61 SSCEGDAILFILKFHLCIFAVADVDM 87
          SSCEGDAILFILKFHLCIFAVADVDM
Sbjct: 61 SSCEGDAILFILKFHLCIFAVADVDM 86

The following BLAST results are available for this feature:
BLAST of Csa6G004610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7G5_CUCSA2.1e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004610 PE=4 SV=1[more]
BLAST of Csa6G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190466|gb|KGN45670.1|3.0e-43100.00hypothetical protein Csa_6G004610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G004610.1Csa6G004610.1mRNA