CSPI06G00600 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G00600
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 438446 .. 438766 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGGTATTGGGTTATGTTGTTCGGTTTGGATCAAATTGAAGTGTTGATGAATTGTTTTGCTAGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA

mRNA sequence

ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA

Coding sequence (CDS)

ATGGAAAGCTACAGTTGTAGCCTATGGCTAAATGGAGAGCTAAGGGGATGGAGGCATCATGATTTACCGAGTCATTGTTACATTAACGAGCTGAATTCAGAGGCTCAAGCAATTTTGAATTTGTCTCCTAGAAATGATAAGGATCTTGGTCGCAAGGCCCTCATAAAGAAGGCAAATAGATCTAGTTGCGAAGGGGATGCTATTCTGTTCATTCTAAAGTTTCATCTTTGTATATTTGCTGTCGCTGATGTTGACATGTGA
Homology
[Close]
BLAST of CSPI06G00600 vs. TrEMBL
Match: A0A0A0K7G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004610 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60
          MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60

Query: 61 SSCEGDAILFILKFHLCIFAVADVDM 87
          SSCEGDAILFILKFHLCIFAVADVDM
Sbjct: 61 SSCEGDAILFILKFHLCIFAVADVDM 86

[Close]
BLAST of CSPI06G00600 vs. NCBI nr
Match: gi|700190466|gb|KGN45670.1| (hypothetical protein Csa_6G004610 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-43
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60
          MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR
Sbjct: 1  MESYSCSLWLNGELRGWRHHDLPSHCYINELNSEAQAILNLSPRNDKDLGRKALIKKANR 60

Query: 61 SSCEGDAILFILKFHLCIFAVADVDM 87
          SSCEGDAILFILKFHLCIFAVADVDM
Sbjct: 61 SSCEGDAILFILKFHLCIFAVADVDM 86

The following BLAST results are available for this feature:
BLAST of CSPI06G00600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G00600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7G5_CUCSA1.2e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004610 PE=4 SV=1[more]
BLAST of CSPI06G00600 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G00600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190466|gb|KGN45670.1|1.8e-43100.00hypothetical protein Csa_6G004610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G00600.1CSPI06G00600.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G00600Csa6G004610Cucumber (Chinese Long) v2cpicuB314
CSPI06G00600CsaV3_6G000660Cucumber (Chinese Long) v3cpicucB364
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G00600Cucumber (Chinese Long) v2cpicuB295
CSPI06G00600Cucumber (Chinese Long) v2cpicuB309
CSPI06G00600Melon (DHL92) v3.5.1cpimeB412
CSPI06G00600Melon (DHL92) v3.5.1cpimeB418
CSPI06G00600Melon (DHL92) v3.5.1cpimeB502
CSPI06G00600Watermelon (Charleston Gray)cpiwcgB455
CSPI06G00600Watermelon (Charleston Gray)cpiwcgB502
CSPI06G00600Watermelon (Charleston Gray)cpiwcgB507
CSPI06G00600Watermelon (97103) v1cpiwmB516
CSPI06G00600Watermelon (97103) v1cpiwmB523
CSPI06G00600Watermelon (97103) v1cpiwmB558
CSPI06G00600Cucurbita pepo (Zucchini)cpecpiB143
CSPI06G00600Cucurbita pepo (Zucchini)cpecpiB203
CSPI06G00600Cucurbita pepo (Zucchini)cpecpiB317
CSPI06G00600Cucurbita pepo (Zucchini)cpecpiB632
CSPI06G00600Bottle gourd (USVL1VR-Ls)cpilsiB397
CSPI06G00600Bottle gourd (USVL1VR-Ls)cpilsiB408
CSPI06G00600Bottle gourd (USVL1VR-Ls)cpilsiB468
CSPI06G00600Melon (DHL92) v3.6.1cpimedB408
CSPI06G00600Melon (DHL92) v3.6.1cpimedB413
CSPI06G00600Melon (DHL92) v3.6.1cpimedB487
CSPI06G00600Cucumber (Gy14) v2cgybcpiB150
CSPI06G00600Cucumber (Gy14) v2cgybcpiB243
CSPI06G00600Cucumber (Gy14) v2cgybcpiB288
CSPI06G00600Silver-seed gourdcarcpiB0077
CSPI06G00600Silver-seed gourdcarcpiB0530
CSPI06G00600Silver-seed gourdcarcpiB0636
CSPI06G00600Silver-seed gourdcarcpiB0966
CSPI06G00600Cucumber (Chinese Long) v3cpicucB346
CSPI06G00600Cucumber (Chinese Long) v3cpicucB359
CSPI06G00600Watermelon (97103) v2cpiwmbB435
CSPI06G00600Watermelon (97103) v2cpiwmbB499
CSPI06G00600Watermelon (97103) v2cpiwmbB492
CSPI06G00600Wax gourdcpiwgoB546
CSPI06G00600Wax gourdcpiwgoB538
CSPI06G00600Wild cucumber (PI 183967)cpicpiB140
CSPI06G00600Wild cucumber (PI 183967)cpicpiB182
CSPI06G00600Cucumber (Gy14) v1cgycpiB198
CSPI06G00600Cucumber (Gy14) v1cgycpiB458
CSPI06G00600Cucurbita maxima (Rimu)cmacpiB319
CSPI06G00600Cucurbita maxima (Rimu)cmacpiB372
CSPI06G00600Cucurbita maxima (Rimu)cmacpiB647
CSPI06G00600Cucurbita maxima (Rimu)cmacpiB925
CSPI06G00600Cucurbita moschata (Rifu)cmocpiB310
CSPI06G00600Cucurbita moschata (Rifu)cmocpiB360
CSPI06G00600Cucurbita moschata (Rifu)cmocpiB641
CSPI06G00600Cucurbita moschata (Rifu)cmocpiB903