Csa5G649300 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGAAGAAGAAGAAAAAAATGTTGTAGAAAAATTGAGTTTCTTCCTCTTCGTTATCACTGCTCTGCTCTTATCTGAGTGAGCTCCATTGATGAGGTGATCAGCTTTCACACAATTTCTTCTCCTCCCTTTTTCTTTTTGTTTTGTTTTGTTTATAATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCTACCTTTATTGATGGTAATTTTATTATGGTTTATTTGCTTCTTTTTGTGTGTGTGTGTGTGTATTTTGAACTGGGTAATGAATTTCTTGGTGTAATGATCAATTTCATTGTGGTTCGATGAGCATTTTGCTGGGGGTGTGTTGTTCATCGCGTTTTGAAATTGGTCTGGATTATGCGTTGGTTATTGTAATGTGAGGCTGTTCTGAAATTCCTCGTGCTGATTCTGATTGTGTGTGTGTGTGGCAATCATATATTGCTCCTCCATCTTCTTCTTCTATGTCTCGTGAGATTTTGATGCAAATTAACCTCAATTTTTGCGAAAATTTGAGTTTTTTAGATTCCCCTTTTAAAAAATTTAACTCTACAATGCCTGGAGTTAATTTGACATTCCTACTGCTATGCAAAAAAGGGGGAAAACAGCTGAACGTCTTGAATTTCCATAGTTAATAGAGTACTTATATTCTACTTTTCTCTTGTACTTTCATATTTATTCTTTTTTGGTACTAACTTTCAGACCTTCTGTTTTAGTCCTAGGGGGTAGCGCTCCATTGTAGGTTTAAATTGTTGACCTTGTTAGTTAGACTCTCGGTTGCTTTGGTTGGGTATGAAGTGACTCAATTCCCCTCCACTTATTTAGAGCTCCCGTTTGGAGGGAATTCAAGAACTCAGTTGTTTTGGAATCCTGCTCTGGAAAGTTTTAGAAAAGGTTGTCTTCTTTGAAAAAGACTTACTTTTTCTAAAGGAGGGAGACTCTCTTGTTCAGGTTTTGACGGGGCTCCTAGTTATTTTTTCCTTATTTAGGATTTGGTCTCAGTCTGTAAGAATCTGAGAGATCGATCATTGATGAGAAACTTTTAGTGGCAAGGGGTTGATGAGGGAGGGAGATGGTTTGGATATAGTTAAGTGGCAGGTGGTTCTTAAGCCTGCCAACTTGGGGGTTTGGGTATTAGGAGTATAAGACTAAATAGTAAGGTTATTTTGGCCAAATGGTTGTGGTGGTCCTTCACTGAAGTTTGAGACTGACGCACTGCGGTGTAGAGTTTTTGCAAGTAGTATTTAATGTCATAGGCCATATCCTCCTAAACATCTTGGATTATTACTTATTACTTTGACCAATGAGTTGTCTCATAGTTACACGTGGCTCTGTTTAAACATAATGGATTAACTGATCAGTAATATGTTATCACCTCTCTACATTTGCAGCTATCTACTTTCTAATTCTAGTTCCCAAATTCTAATAATGGTGTCATTCACTTTAAAGTGCGTGTGGTACTATAGTTGTATTCCTTTGTTTTTAAGCATAAAATCATTACCAGAGAAAAAGGGATATTTTGAATAATTGAGGAGTTGCCATTTCTCTGAAGGATCTCTCTCAATCATGTAATTTTTAACGTAGAGGTTTTGATTAACAGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGGTACAAATCTGTTTTATTTAATACAATTATTTTGGAAATTTACCTTCTACATTTATAGTGGTGCCCTTTGTTGTAAGGCATGGCATATTTGGGGTCGCTGTAGGGGTGACCCAGTTGGAGAACTTAATAGATTAAAACCTTTGTAGCTTTTTGTCTACTTCGCCCCTTTGGGATCAAATGGTGATGGGGCTATGAACATAATGTAAGAATTGGACTTGAAGTAGACCAAAAGTACTATTAGATTTATAACATATATGCTGAAAGCCTGAAACTACGTTTTCCTGTACTAGTTCTACTTGTAGTTGTTGTACCACTTTTTGGTTGCCCATGTGGAGGTGCAAGAGATACTTCCTCCATGGTTTAGTTTTTTACTTTTGCCAACTATCGATTGTGAAGTTTATGTTATGATTTCTTTCCTTCTAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTGAGTGTTCTGTACCAATATAGCAAATAGATAGATTATCATGTGCCTCCTAGTTATTAACTTAGTATCTCTTATTAATTCAGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCGGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTGGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGGTCAGTTTTCAATTCCTCAATGAATTTCAAAATTGTACCTCTTTCCCTGTTTCATTTCTACAGTGATATCTATATTCATAAATGATTGTAGCTTTCTTTTCTTCAATAAACTATTTTGATTCTCCTTAGTTTTATTGATGCATACAGAATGCTATGAGCTGTATGAACTTCAAAACATAAACAGATTTATTTTCTTTAATGCAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTGTAAGTTTTCAAACCGTTGCCCCTCACTACTTAGAGATGTGATAATAACATCTTACCTCATAAATGTGTACTTGACTTGGTTCTTAAAGTGTTCGTGCTTGTGCTTTTTAGGATCGATTGCTTCTTTATTTAAAATTTCTATTAGTAAAAGGTGCATTTGACCAATTATCAGTGCTTTTTAAAGTCTTTCTAGAATGCACTTGGGGTGCATTTGGGATTGATTTTGTAGGAGTTTAAAGTGATTATGAGGAAATTTTAACTGTTTAGTGTTTGGTAAAACTGATTACAGGATAATTGAAAGGAAATCACTTTTTCAATTCAATTTGTTTCTAAAATCTATGTAGAGTAGTTTTTGAGATTGAGTTCCAAAAATATCATGCCTCTTCTAATTAACTACTAAAATTCATAGTTTATTCCTATTCTATAATACTTTTTCTCATTTAAGTTTGAAATTTACCAAAACACTTGTTTACTTCATTCTACAGCCGATATTTTAAAAAGTGCAGCTATTAGTAATTATTTCAAAAGCTACAATAACTAAGCCTTAAAGTGCTCTTTTGTGAAAGCATTTACACTTTTATTAAGAGGTAAGACAAACACATCAATGTGTTTGCTTGAACTATGATCTGGATTCTTAGTTGGATTCTGAGTTTTCGAGTTTCAATTTTATGGTCTGGTTTCTTTTCCACTGTTCATTTTACTTGGGGTGTTTCAGCAAGAAGAGTCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGTAATATGTCTTATTATTGCTATGCTATACTACAGACTTAATGCAATCAAATCTTCATTTTGGAACCTCGATCTAGCCAATATGGAATTAACTCATAATCATGAAATTTACTCTATCATCATCATATTACAGTTTATAGGTCCATAGCCCCAGCTTATTCACATCTCTATCTCGCCATTCTTTTACGAGGGAATGTGGTTAGAGAGTTATGTCGTGGACTTGAAAAGGGATATGAGTATTTGAGAATGTTGGGTTTAAATGTTAGGATCAAATAATATTTACATGATATTAGTGAAAAAATACACATAAATTGGATACATTAAAGATTCCATAGTTGATTGATATTGAAATTTGTTGGTTTAAACAATCATTCTTTAATTTCAGTAATTGAATGGGAGGTGGTACGGACATCAAGGATATTTTGCATAAGATCAGACCGTCATTCTATAATGATTGGTCAGGTTATATATGCAAACAAAGGTGTCCACAATCAAAAGAGTTACTCTATAAGATTAGTCGGCATACATGCATACAAAGATGTACACAATCAAAGTGTGATTTGATTAGTTGGGATATTATATGCAAACATAGTTATGGATGGGGTTCTTTGGTTAGTTAAATGTGAAAGGGTTGTGAATGTTGTTTTAATTTATTTTTGAAAATTGCAGGATGCTATGAAGGATATTGAATAGGCATGGCACCTCGGTGAATGTAGTAGGAGGTATAAAATTAAATTCATAATTGAATTTTGAAAATTGGCAAATGCTCTGTATATTTTTTGTTTGACCAATTCAGAGAAACTTCAACCAGTTGCTGATAATGTATAATGTTTACATTAATAATCAATATAATCAATCTCTAATTGTAACTTAAACCTCTCCATCTATCTATCTATAACATAAAAGTATA ATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCTACCTTTATTGATGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCGGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTGGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTCAAGAAGAGTCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAG ATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCTACCTTTATTGATGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCGGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTGGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTCAAGAAGAGTCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAG MRVLLTLRPASSNPPPCLSSPNFSPPLASSFLFSFRPNKRFHFLKPCSSLKQSKKPTLQKTPTSAPQSFKWLFSAKSDDDDAGEKGNKGVDGDGAVLEDDSAVKGTLLAGVLLVGVIGGFAFAGYVYRDPINAFLNQFSTFIDGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVIGTVIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEVGLLGGGNGQLWTLGLGLLATALAAAYVTRLAKDAMKDIE*
BLAST of Csa5G649300 vs. Swiss-Prot
Match: Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.2e-33 Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 1
BLAST of Csa5G649300 vs. Swiss-Prot
Match: YDJX_ECOLI (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) GN=ydjX PE=3 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 7.8e-23 Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Csa5G649300 vs. Swiss-Prot
Match: Y1528_MYCBO (TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-12 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
BLAST of Csa5G649300 vs. Swiss-Prot
Match: Y1491_MYCTU (TVP38/TMEM64 family membrane protein Rv1491c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1491c PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-12 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
BLAST of Csa5G649300 vs. Swiss-Prot
Match: Y1491_MYCTO (TVP38/TMEM64 family membrane protein MT1538 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1538 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-12 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 1
BLAST of Csa5G649300 vs. TrEMBL
Match: A0A0A0KST0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649300 PE=4 SV=1) HSP 1 Score: 658.7 bits (1698), Expect = 3.8e-186 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1
BLAST of Csa5G649300 vs. TrEMBL
Match: B9SHP5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0742130 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 6.4e-141 Identity = 271/340 (79.71%), Postives = 292/340 (85.88%), Query Frame = 1
BLAST of Csa5G649300 vs. TrEMBL
Match: A0A067LAW0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17218 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 1.9e-140 Identity = 269/338 (79.59%), Postives = 294/338 (86.98%), Query Frame = 1
BLAST of Csa5G649300 vs. TrEMBL
Match: A9PH39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10500g PE=2 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 2.3e-138 Identity = 259/334 (77.54%), Postives = 282/334 (84.43%), Query Frame = 1
BLAST of Csa5G649300 vs. TrEMBL
Match: A0A0D2VD99_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G133200 PE=4 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 3.9e-138 Identity = 263/336 (78.27%), Postives = 293/336 (87.20%), Query Frame = 1
BLAST of Csa5G649300 vs. TAIR10
Match: AT1G22850.1 (AT1G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 464.5 bits (1194), Expect = 5.4e-131 Identity = 247/333 (74.17%), Postives = 273/333 (81.98%), Query Frame = 1
BLAST of Csa5G649300 vs. TAIR10
Match: AT5G19070.1 (AT5G19070.1 SNARE associated Golgi protein family) HSP 1 Score: 118.2 bits (295), Expect = 9.5e-27 Identity = 75/229 (32.75%), Postives = 117/229 (51.09%), Query Frame = 1
BLAST of Csa5G649300 vs. TAIR10
Match: AT1G03260.1 (AT1G03260.1 SNARE associated Golgi protein family) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25 Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 1
BLAST of Csa5G649300 vs. TAIR10
Match: AT2G02370.1 (AT2G02370.1 SNARE associated Golgi protein family) HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12 Identity = 62/238 (26.05%), Postives = 115/238 (48.32%), Query Frame = 1
BLAST of Csa5G649300 vs. TAIR10
Match: AT1G12450.1 (AT1G12450.1 SNARE associated Golgi protein family) HSP 1 Score: 68.6 bits (166), Expect = 8.6e-12 Identity = 68/238 (28.57%), Postives = 106/238 (44.54%), Query Frame = 1
BLAST of Csa5G649300 vs. NCBI nr
Match: gi|449447579|ref|XP_004141545.1| (PREDICTED: uncharacterized protein LOC101204460 [Cucumis sativus]) HSP 1 Score: 658.7 bits (1698), Expect = 5.5e-186 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1
BLAST of Csa5G649300 vs. NCBI nr
Match: gi|659119308|ref|XP_008459587.1| (PREDICTED: uncharacterized protein LOC103498671 [Cucumis melo]) HSP 1 Score: 644.4 bits (1661), Expect = 1.1e-181 Identity = 326/334 (97.60%), Postives = 330/334 (98.80%), Query Frame = 1
BLAST of Csa5G649300 vs. NCBI nr
Match: gi|1009141970|ref|XP_015888470.1| (PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Ziziphus jujuba]) HSP 1 Score: 510.8 bits (1314), Expect = 1.9e-141 Identity = 275/337 (81.60%), Postives = 293/337 (86.94%), Query Frame = 1
BLAST of Csa5G649300 vs. NCBI nr
Match: gi|255569090|ref|XP_002525514.1| (PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Ricinus communis]) HSP 1 Score: 508.4 bits (1308), Expect = 9.2e-141 Identity = 271/340 (79.71%), Postives = 292/340 (85.88%), Query Frame = 1
BLAST of Csa5G649300 vs. NCBI nr
Match: gi|802540533|ref|XP_012077039.1| (PREDICTED: transmembrane protein 41B [Jatropha curcas]) HSP 1 Score: 506.9 bits (1304), Expect = 2.7e-140 Identity = 269/338 (79.59%), Postives = 294/338 (86.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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