Carg26292 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGCGCCCATCTCACCTTATGGCCGTCATCTTCAAACCCATCGCCTTATCTTTCTTCTCTCCATTTCTCTCCTCCTCTCTCCTCCTCCTCTTTCCTCTTCAGCTTCACACCCAACAAACGCTTCCACTTCCTCAAGACCTGTTCCTCTCTCAAGCAATCCAAGAAGCCTTCTCTTCAGAAGACTCCCACTACCGCCCCTCAGAGTTTCAAGTGGCTCTTTAGCCCCAAGTCCGACGACGATGACGCCACCGCCGCCGCCGCCGCCGATAAAGGGAATAAGGACGCCGAGGACGATACTGCTCTTAAGGGTACCCTTTTGGCCGGTGTGTTGCTTCTTGGGATTATTGGTGGATTTGCATTTGCTGGATATGTTTACAAGGATCCGATTAATGCGTTCTTGAATCAGTTCTCCACGTTTATTGACGGTAATTTTGTGATTATTCATGGATTTTTGTTGTTTTCTGTTTTTAGTTTTGAATTTGGGAATGGATTGATTATCATTGTGCTTTGTTCTTCGTTGCTGTTTGAATTGGTCGTAAGTATGACTTCTTTTACCCTTCAGGTTTTCTTTTAAAACTATGCTGAATTTCTGGAGTTATTTGAACTTGATCATACTGTTAAACACCAATAGTGTTTGGAGTTATATGATTGTATCCTACTTTTCTCTTGTACTTCCATGTTTATTATGTTTTGGTTTTAGGTTTCAGACCTTCTGCTTTAGTCTTTGAACTTTGCATTATAATCATCTTAGTCTTTTTCATTTACTTTCTGAACTATTTAGTACGAACTTGTTTAACCAGTACATGACTATATAGAGACCGAATGTTTGTGTTATCACAAGGGAACTGGAAGTAGCTGACTTCGCTAATTTGGTTGGATTTGTTTAAATATTTATTTAGATTATTTAGATTATTTAGTGATTGCCCTTTCTCCTTTATGAAAGGATATATAATTCTCTGCAAAACAATAAAAACACAGCAGTTTGATTTAGATTTCCAACTTGGTATTAGAGATTTTTTAGAAGATCTGATTAGAATCAAAACCCTAACTTAATCGGTGAAGCCTTCATCACTACCGATGATCCATCGTGATCACATTTCATTCGAAGCCTTCATAGCTTCCGTCACCGTGACCAATTTCCATTTAGATTGTGAAGAAAAGGGAACATATTACTACCCTACTGATTTGTTTTTCCCGATAGAAAAAAATTTCAAGTCGTTCTTCCAATCATCATCACTAAACATCAAATTTTGAGATTCATATTTGAAGTATTCAATAATGGAGGGAACCAAAGGCGTCGGAGGAAGAAAAGGAGGCGACAAAACTAAGATCTCTCAATTTGTCAAGGCTGGACTCGAATTCTTGGATGGAAGAATCAAACGGTACCTTAAAAAAAGTTGCTACGAAAAGTCTACTGTCGTAGATTATTAGTTCACCCCTGCTACTGCTAATTTACCAACTAAACCATTCACTCCAAAGAAGTGGCTACGAGAGAGGCGAGCAACACCCATGGATGTGCTCCAAGAGAAGTGAACACGAGAGCTTCATAGCTACCAATCTTCCACCTGTTCTTCCATCTTAACCAAATTTATTTAGAGCCTTAATAGCTACTGTTGACAAATTTATTCGGAGCCTTCATGGCTACCGTTGACAAATTATTTGGTCGGAGCCTTCATTGACAAATTTTGTTCGGTGCCTATTGACAAATTTATTTGGAGCCTTCGTAACTGCGGTTGACAAATTTATTCGGAGTCCCTGCCTACTAAGATTATCTAGTGATTTAGATTTAGTTAGCATTTTTCCATATATATATAATTCTTTGAAAATTAATTAGAAAACAACGATCCAATTTAGACTTGCAACAAATTTGATGTCAGAGTTCTGAACTAGGTTTAAGTTGTTTATTTGAACGACTAATGACACGTGAATGAGAATCACTAAAATAGTTTCTGATGCAAAGTGTAGAAGTTTAAAGTTTAAAGTTTAGTGATCAAACTAAAATTAGTATGAAGGTCTTAGGAACAAAATAGGATTTAAACACAGTTTTTATGATTTTATATGTATTCATGGAAGCTGGATTGATGTGTTCATTGATCATCTATCTGCATCTGCAGCTAGCTGCTTTCTAATTGTTGTTCCCAAAATCTAATAGTGGTTTTGTTCAGGTAAAGAGGATTTTGTACAATGATAAATGAATCCTCTTTAATGCAACTACTATTTTTTCCTTTTCTGTAACATAGCATCATTACCAAATAAAAAGGGATAGATATTGAATGGCTGAGGAGGTCTCCATTTGTGTGAAGGATCTCTCTCAATCATGCAATTCATAACATAGAGCTTTTGATGAACAGGATATGGTCCAGCAGGATATGCTTTGTTCGTAGCAGTGTATGCAGGATTGGAGGTACACATATTTTTGCTTTAATACATGTATCTGGAATTTGCCTTTTACATCTATAGAGGTGGCCTTTGTGGTGAGGACTAGGTGGTGTGCCCCAATGACACAGGCCCCCAAAAGAAGGGAAGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAAGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAACCTTGAGGGGAAGCCCATAAGGGAAAGCCCAAAGAGGATATTATCTGCTAGTGGTGGGTTTGGTCTGTTACATTGTTATTATCCTTAATGACCCTTTAGGTCTTATTGTGAAGGATGGAACCGTTTTTTGTATAGTTATCTGTTTGTCTCCTTAGGCGTGGGTTGGTTTTTTTGGTATGCTTGTGTTCCTTTTCTTTTGTATTTCAATGAAACGTGATTTATGGAGATGGGTTCATGAGCACAATACAAGTAGTGGACGATACTTTTAGATGAGTTGAGAGGGATCATAGTGTCGTGTGGTCTCTTGTGAGGTTCTATTAAAGATATCCCTTCACAGGGACCTGCTCCGAACAGGGTGGAGAATTTCCATTTAAAAGATGAATCGGGGAGGGAGCGGAGAGAGTTTTCTCCCCGTTCTGTACTACCAGGCTTGCGAAGAAGATCCATAACCTTTATGCTGAAACTATGAAAACTGTTTCCCTGTGTTACTTGTTTTTCACTTTTGGCTGATACTTCCATGGTGTCAGTTTCAATATTTTCCATCTGTTATGAAATTTATGGTATATTTTTGTTCCCTTCTAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTGTTTGGCTCTGTAATTGGGACGATTATAGTTTCTATTAGTGGAACGGTGAGTGATTTGTTGAAGTAAAACAAACAGATGGAATAGCATATGGCCGCTAATTATCAGCTCATTGTCTCCAAATATTTCAGGTTGCTGCAAGTGTTGCCTTCTTGATTGCTCGGTATTTCGCTCGTGAGCGTATTCTTAAGCTTGTAGAAGGAAACAAGAAATTTGCTGCCATTGATAAAGCCATTGGAGAAAATGGTTTCAAAGTAGTCACCCTCCTACGTTTGAGCCCTTTGCTTCCATTTTCTCTGGGAAACTATTTATATGGACTCACATCTGTCAAGTTTGTCCCCTACGTGTTAGGAAGGTCAGTTTTCAATTCTCAATTAACCTTACAAAGTTTAATCTTAGCTTTTGTTCTTGACGTTTTTGATTCTCCTTGAATGCAGTTGGCTGGGGATGCTTCCGGGAACGTGGGCTTATGTGAGCGCGGGTGCGTTTGGACGAGCAATTCTTGTAAGTTTCCGATTTGGTTCATCTCTTAAAGATGATTTGAATTCTTAGTTGAGTTTATAATCTTTTACTTGGGATGTTTCAGCAAGAAGAATCTGAAGTTGGTTTGCTAGGAGGAGGAAATGGTCAGCAGCTATGGACGCTGGGACTTGGATTGTTGGCAACCGCGTTTGCTGCTGCATACGTTACACGATTAGCCAAGGTAATGTCACTTTTTTGTGTAAATACTTGCCCTTTTCGGTATACTTACCCATTGCTACCACGTACTTTATGAACGATCTACTCAAATCTAAAATGAACATGATCATCTTAGAGTAGTGTAATAGTCTAAGCCCACCACTAACAGATATGGTCCTCTTTCGACTTTTCCTTTCGAGTTTCCCCTCAGTTTTTAAGCTAGGGAGATGTTTCCACTCTCTTATGAAGAATGTTTCATTCTCTTCCCCATTCGAGTTTCCCCTCAGTTTTTAAGCTAGGGAGATGTTTCCACTCTCTTATAAAGAATGTTTCATTCTCTTCCCCAACCGATATAGAGTTTCACAATTCAATCCCTTTGGGGCCCAGTGTCCTCGTTGGCACTCGTTCCCATCTCCAATCGATATGGGATCTCACAATCCACCCTCATTCAGGGCCCAACGTCCTCGCTGGCACTCGTTCCTCTCTCTGATGTGGAATCTCACAAGTAGTTTATAAGTTGATAAATTCATGTCAATCTAAACATAATTCAGTTGGTTAAAATATTTATCTTCTACCAAGGGGTTATAGGTTAGAATTCCTCCACACTTTTAAGTCATAGTTTAGGATACCAAAATTTTTAGTGTTCGATATTAAATGTCAATATCATAAAACCTAAACTGAGTAGACAGATAGGACTAGATATTTCATGATTGTCAATATAAAATGTAACTGAATTAAGCAATCTTTTCACAAGATTAACTATTATGATCGGCGGATTTTGAAAGGTGATTCTAATGTTATTGCAGGATGCTATGAAGGATATTGAATAGACATGACCCCTTGAGGAATGTAGTAGGTATAAATTAAAATTCATAATTGAATTTTTGAAGAAAATGGCTAATTCTCTGTATATTTTGTATTTGTCCAACTAATAGAGAGCCACTGCTCTTCCTGCTGCTCATGATGTACAATATTTACCATAATCAATATAATTAACTAATCTCT ATGCGCGCCCATCTCACCTTATGGCCGTCATCTTCAAACCCATCGCCTTATCTTTCTTCTCTCCATTTCTCTCCTCCTCTCTCCTCCTCCTCTTTCCTCTTCAGCTTCACACCCAACAAACGCTTCCACTTCCTCAAGACCTGTTCCTCTCTCAAGCAATCCAAGAAGCCTTCTCTTCAGAAGACTCCCACTACCGCCCCTCAGAGTTTCAAGTGGCTCTTTAGCCCCAAGTCCGACGACGATGACGCCACCGCCGCCGCCGCCGCCGATAAAGGGAATAAGGACGCCGAGGACGATACTGCTCTTAAGGGTACCCTTTTGGCCGGTGTGTTGCTTCTTGGGATTATTGGTGGATTTGCATTTGCTGGATATGTTTACAAGGATCCGATTAATGCGTTCTTGAATCAGTTCTCCACGTTTATTGACGGATATGGTCCAGCAGGATATGCTTTGTTCGTAGCAATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTGTTTGGCTCTGTAATTGGGACGATTATAGTTTCTATTAGTGGAACGGTTGCTGCAAGTGTTGCCTTCTTGATTGCTCGGTATTTCGCTCGTGAGCGTATTCTTAAGCTTGTAGAAGGAAACAAGAAATTTGCTGCCATTGATAAAGCCATTGGAGAAAATGGTTTCAAAGTAGTCACCCTCCTACGTTTGAGCCCTTTGCTTCCATTTTCTCTGGGAAACTATTTATATGGACTCACATCTGTCAAGTTTGTCCCCTACGTGTTAGGAAGTTGGCTGGGGATGCTTCCGGGAACGTGGGCTTATGTGAGCGCGGGTGCGTTTGGACGAGCAATTCTTCAAGAAGAATCTGAAGTTGGTTTGCTAGGAGGAGGAAATGGTCAGCAGCTATGGACGCTGGGACTTGGATTGTTGGCAACCGCGTTTGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAGACATGACCCCTTGAGGAATGTAGTAGGTATAAATTAAAATTCATAATTGAATTTTTGAAGAAAATGGCTAATTCTCTGTATATTTTGTATTTGTCCAACTAATAGAGAGCCACTGCTCTTCCTGCTGCTCATGATGTACAATATTTACCATAATCAATATAATTAACTAATCTCT ATGCGCGCCCATCTCACCTTATGGCCGTCATCTTCAAACCCATCGCCTTATCTTTCTTCTCTCCATTTCTCTCCTCCTCTCTCCTCCTCCTCTTTCCTCTTCAGCTTCACACCCAACAAACGCTTCCACTTCCTCAAGACCTGTTCCTCTCTCAAGCAATCCAAGAAGCCTTCTCTTCAGAAGACTCCCACTACCGCCCCTCAGAGTTTCAAGTGGCTCTTTAGCCCCAAGTCCGACGACGATGACGCCACCGCCGCCGCCGCCGCCGATAAAGGGAATAAGGACGCCGAGGACGATACTGCTCTTAAGGGTACCCTTTTGGCCGGTGTGTTGCTTCTTGGGATTATTGGTGGATTTGCATTTGCTGGATATGTTTACAAGGATCCGATTAATGCGTTCTTGAATCAGTTCTCCACGTTTATTGACGGATATGGTCCAGCAGGATATGCTTTGTTCGTAGCAATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTGTTTGGCTCTGTAATTGGGACGATTATAGTTTCTATTAGTGGAACGGTTGCTGCAAGTGTTGCCTTCTTGATTGCTCGGTATTTCGCTCGTGAGCGTATTCTTAAGCTTGTAGAAGGAAACAAGAAATTTGCTGCCATTGATAAAGCCATTGGAGAAAATGGTTTCAAAGTAGTCACCCTCCTACGTTTGAGCCCTTTGCTTCCATTTTCTCTGGGAAACTATTTATATGGACTCACATCTGTCAAGTTTGTCCCCTACGTGTTAGGAAGTTGGCTGGGGATGCTTCCGGGAACGTGGGCTTATGTGAGCGCGGGTGCGTTTGGACGAGCAATTCTTCAAGAAGAATCTGAAGTTGGTTTGCTAGGAGGAGGAAATGGTCAGCAGCTATGGACGCTGGGACTTGGATTGTTGGCAACCGCGTTTGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAG MRAHLTLWPSSSNPSPYLSSLHFSPPLSSSSFLFSFTPNKRFHFLKTCSSLKQSKKPSLQKTPTTAPQSFKWLFSPKSDDDDATAAAAADKGNKDAEDDTALKGTLLAGVLLLGIIGGFAFAGYVYKDPINAFLNQFSTFIDGYGPAGYALFVAILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAILQEESEVGLLGGGNGQQLWTLGLGLLATAFAAAYVTRLAKDAMKDIE
BLAST of Carg26292 vs. NCBI nr
Match: XP_022932492.1 (uncharacterized protein LOC111438896 [Cucurbita moschata]) HSP 1 Score: 527.7 bits (1358), Expect = 2.8e-146 Identity = 317/334 (94.91%), Postives = 317/334 (94.91%), Query Frame = 0
BLAST of Carg26292 vs. NCBI nr
Match: XP_022973391.1 (uncharacterized protein LOC111471944 isoform X1 [Cucurbita maxima]) HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146 Identity = 326/334 (97.60%), Postives = 326/334 (97.60%), Query Frame = 0
BLAST of Carg26292 vs. NCBI nr
Match: XP_023525061.1 (uncharacterized protein LOC111788790 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.8 bits (1340), Expect = 3.4e-144 Identity = 325/334 (97.31%), Postives = 325/334 (97.31%), Query Frame = 0
BLAST of Carg26292 vs. NCBI nr
Match: XP_008459587.1 (PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Cucumis melo]) HSP 1 Score: 469.9 bits (1208), Expect = 6.9e-129 Identity = 287/341 (84.16%), Postives = 295/341 (86.51%), Query Frame = 0
BLAST of Carg26292 vs. NCBI nr
Match: XP_023535509.1 (uncharacterized protein LOC111796928 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 469.5 bits (1207), Expect = 9.0e-129 Identity = 295/339 (87.02%), Postives = 301/339 (88.79%), Query Frame = 0
BLAST of Carg26292 vs. TAIR10
Match: AT1G22850.1 (SNARE associated Golgi protein family) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70 Identity = 143/207 (69.08%), Postives = 153/207 (73.91%), Query Frame = 0
BLAST of Carg26292 vs. TAIR10
Match: AT5G19070.1 (SNARE associated Golgi protein family) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 0
BLAST of Carg26292 vs. TAIR10
Match: AT1G03260.1 (SNARE associated Golgi protein family) HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14 Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0
BLAST of Carg26292 vs. TAIR10
Match: AT4G22850.1 (SNARE associated Golgi protein family) HSP 1 Score: 56.2 bits (134), Expect = 4.3e-08 Identity = 61/188 (32.45%), Postives = 88/188 (46.81%), Query Frame = 0
BLAST of Carg26292 vs. TAIR10
Match: AT1G12450.1 (SNARE associated Golgi protein family) HSP 1 Score: 49.3 bits (116), Expect = 5.3e-06 Identity = 46/142 (32.39%), Postives = 66/142 (46.48%), Query Frame = 0
BLAST of Carg26292 vs. Swiss-Prot
Match: sp|Q55909|Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.3e-21 Identity = 66/194 (34.02%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of Carg26292 vs. Swiss-Prot
Match: sp|P76219|YDJX_ECOLI (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83333 GN=ydjX PE=3 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11 Identity = 46/144 (31.94%), Postives = 66/144 (45.83%), Query Frame = 0
BLAST of Carg26292 vs. TrEMBL
Match: tr|A0A1S3CB16|A0A1S3CB16_CUCME (TVP38/TMEM64 family membrane protein slr0305 OS=Cucumis melo OX=3656 GN=LOC103498671 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 4.6e-129 Identity = 287/341 (84.16%), Postives = 295/341 (86.51%), Query Frame = 0
BLAST of Carg26292 vs. TrEMBL
Match: tr|A0A0A0KST0|A0A0A0KST0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649300 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 7.3e-127 Identity = 283/341 (82.99%), Postives = 293/341 (85.92%), Query Frame = 0
BLAST of Carg26292 vs. TrEMBL
Match: tr|A0A2P5E7L4|A0A2P5E7L4_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_227080 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101 Identity = 248/337 (73.59%), Postives = 263/337 (78.04%), Query Frame = 0
BLAST of Carg26292 vs. TrEMBL
Match: tr|A0A2P4J656|A0A2P4J656_QUESU (Tvp38/tmem64 family membrane protein OS=Quercus suber OX=58331 GN=CFP56_47006 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 9.0e-101 Identity = 231/341 (67.74%), Postives = 246/341 (72.14%), Query Frame = 0
BLAST of Carg26292 vs. TrEMBL
Match: tr|A0A2C9U2W1|A0A2C9U2W1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G116500 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.3e-99 Identity = 253/340 (74.41%), Postives = 274/340 (80.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |