Csa5G591770 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G591770
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative nitrate-induced NOI protein; contains IPR008700 (Pathogenic type III effector avirulence factor Avr cleavage site)
Location	Chr5 : 21428850 .. 21429705 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTCAACTACTCTTTGAATTATCCATTTCCTCAAAACTGCAATATTCTTCAATTATGGCTTCAGTAAGATTCTGCTTTCCCACTTTCTCCATTTTTGTGTCATGCTTTGCTACTTCGTTTTTTTTTTCTTTTCTTTCATTTCTGATTTGTTTTGTTCTTTTTGTAGGCTCAAAAGGGTCCATTTCTTCCTAAATTTGGTGATTGGGATGAACAAAATCCTGCTGCTGCTGAAGGGTTTACTGTGATTTTCAACAGGGCAAGAGATAATAAGAAGAATGGTGGAGCAGCTGGAACTCCTAATAATGTGATACCACCCCAAAACCAAAGTCAAAAGTATGAACCTGCTAAGAAGAATCAGAAGCACAAGTATCCAAGGAAGCAGGTTCGATCCAGTTCTGTTTTGCTTTGCTCCTTTCCTTGCTATCGTAGGAATAAGCTGAAAAGATAACTGATAAACTATAAGAAAAACAATCAAACTAGGACCAAAGTGGAGAAAAAAACCACTTACCATATTTGATCATTACGTGAAAAATTATTATATTATACAAAAACCTCTCTAAAGTTCTAATTACAGTAGCACTCTCTTAAAACATTATGAGCTATGGACTTTTAAACTGGAATGAAATGAAAGTCAAAGACATAATCTCGGTGCTTGAAGTTCATTGCTTTTCGAATATCTTGCGAAAACCAAACTACGATCACTTTTACAATGTGAATTTTTCCTTTCTAACCATCTGGTTTTCTTTGTTGCAGAAAGGATGGTGTGGCTGCTTTTGGTAGACGACTTTGTCACATTGAAAGAACACAAAAAATTCTTCTGTTTGTGGTTGGTGGCTTTCTTGAGTATTGATGGAT

mRNA sequence

ATGGCTTCAGCTCAAAAGGGTCCATTTCTTCCTAAATTTGGTGATTGGGATGAACAAAATCCTGCTGCTGCTGAAGGGTTTACTGTGATTTTCAACAGGGCAAGAGATAATAAGAAGAATGGTGGAGCAGCTGGAACTCCTAATAATGTGATACCACCCCAAAACCAAAGTCAAAAGTATGAACCTGCTAAGAAGAATCAGAAGCACAAGTATCCAAGGAAGCAGAAAGGATGGTGTGGCTGCTTTTGGTAG

Coding sequence (CDS)

ATGGCTTCAGCTCAAAAGGGTCCATTTCTTCCTAAATTTGGTGATTGGGATGAACAAAATCCTGCTGCTGCTGAAGGGTTTACTGTGATTTTCAACAGGGCAAGAGATAATAAGAAGAATGGTGGAGCAGCTGGAACTCCTAATAATGTGATACCACCCCAAAACCAAAGTCAAAAGTATGAACCTGCTAAGAAGAATCAGAAGCACAAGTATCCAAGGAAGCAGAAAGGATGGTGTGGCTGCTTTTGGTAG

Protein sequence

MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKKNQKHKYPRKQKGWCGCFW*

Homology

[Close]

BLAST of Csa5G591770 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.8e-07
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1


Query: 3   SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNG----GAAGTPNN 50
           S +K   +PKFGDWDE NP++A+G+T IFN+ R+ + +G    G++ TP +
Sbjct: 141 SPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH 191

[Close]

BLAST of Csa5G591770 vs. TrEMBL
Match: A0A0A0KTF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591770 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-44
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60
          MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY
Sbjct: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60

Query: 61 EPAKKNQKHKYPRKQKGWCGCFW 84
          EPAKKNQKHKYPRKQKGWCGCFW
Sbjct: 61 EPAKKNQKHKYPRKQKGWCGCFW 83

[Close]

BLAST of Csa5G591770 vs. TrEMBL
Match: M0TVS8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-12
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 3  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEP 62
          SA+KG  LPKFG+WD  NPA+AEGFTVIFN+ RD KK GG +GTP    P +       P
Sbjct: 2  SAEKGQPLPKFGEWDVNNPASAEGFTVIFNKVRDEKKTGGNSGTPTT--PTRKDVGSLPP 61

Query: 63 AKKNQKHKYPRKQKGWCGC 82
             +  +++PRK + W  C
Sbjct: 62 ---DDTYQHPRKTRKWFCC 75

[Close]

BLAST of Csa5G591770 vs. TrEMBL
Match: V4L5T8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011071mg PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-12
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKK-NGGAAGTPNNVIPPQNQSQK 60
          MA+  KG  LPKFG+WD  NPA+AEGFTVIFN+ARD+KK    A   P +++ PQ   + 
Sbjct: 1  MATGNKGRQLPKFGEWDASNPASAEGFTVIFNKARDDKKTKKTAVAGPESLVSPQINDES 60

Query: 61 YEPAK--KNQKHKYPRKQKGWCGCF 83
          ++  K   N+K + PR++K W  CF
Sbjct: 61 HQNNKHHNNRKSQTPREKKKWL-CF 84

[Close]

BLAST of Csa5G591770 vs. TrEMBL
Match: M0TEE7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-12
Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 1


Query: 3  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEP 62
          S++KG  LPKFG+WD  NPA+AEGFTVIFN+ARD KK G  +G      PP+N +  ++ 
Sbjct: 2  SSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGANSGA--TATPPRNDAGGFQ- 61

Query: 63 AKKNQKHKYPRKQKGWCGC 82
            ++  +++PRK + W  C
Sbjct: 62 --QDDTYQHPRKSRKWFCC 75

[Close]

BLAST of Csa5G591770 vs. TrEMBL
Match: A0A0A0LRE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050070 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.0e-12
Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 1


Query: 1   MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60
           MAS  KG  LPKFGDWD  NPA+AEGFTVIFN+AR+ KK     GT  N++P     ++ 
Sbjct: 59  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKK---TTGTAANMVP----QERN 118

Query: 61  EPAKKNQKH-KYPRKQKGWCGC 82
           EP   N+ + +YP  +K W  C
Sbjct: 119 EPVFNNESYPQYPPPKKRWFCC 133

[Close]

BLAST of Csa5G591770 vs. TAIR10
Match: AT3G48450.1 (AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 73.9 bits (180), Expect = 5.1e-14
Identity = 42/93 (45.16%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKK--NGGAAGTPNNVIPPQNQSQ 60
          MA+  +   LPKFG+WD  NP +AEGFTVIFN+ARD+KK      AG  + V PP+N+  
Sbjct: 1  MATGNRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNE-- 60

Query: 61 KYEPAKKNQKHKY---------PRKQKGWCGCF 83
            EP K N  H +         PR +K W  CF
Sbjct: 61 --EPPKNNNNHHHNHHTRHSQTPRSKKKWL-CF 88

[Close]

BLAST of Csa5G591770 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-12
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 4  AQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY--E 63
          A KG  LPKFG+WD  +P++AEGFTVIFN+AR+ KK GG + +P    P  N++ +   +
Sbjct: 2  ADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

Query: 64 PAKK 66
          PAKK
Sbjct: 62 PAKK 65

[Close]

BLAST of Csa5G591770 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-12
Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 1


Query: 6  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGT-PNNVIPPQNQSQKYEPAK 65
          KG  LPKFG+WD  NPA+AEGFTVIF++A D KK   A+G  PN+++ PQ      +   
Sbjct: 5  KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQ--N 64

Query: 66 KNQKHKYPRKQKGWCGCF 83
           N   + P+ +  W  CF
Sbjct: 65 NNHSSQNPKAKNKWF-CF 79

[Close]

BLAST of Csa5G591770 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 4.8e-12
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 1


Query: 6  KGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAK 65
          KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        +S   +P+K
Sbjct: 20 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

[Close]

BLAST of Csa5G591770 vs. TAIR10
Match: AT5G40645.1 (AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 57.4 bits (137), Expect = 5.0e-09
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 1


Query: 10 LPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEPAKK 66
          LPKFG+WD  +PA+AEGFTVIF +ARD+KK   A+G   +     N+SQ  EP KK
Sbjct: 15 LPKFGEWDVNDPASAEGFTVIFAKARDDKKT-NASGRAASQRRDNNKSQD-EPTKK 68

[Close]

BLAST of Csa5G591770 vs. NCBI nr
Match: gi|449435021|ref|XP_004135294.1| (PREDICTED: RPM1-interacting protein 4 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-44
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60
          MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY
Sbjct: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60

Query: 61 EPAKKNQKHKYPRKQKGWCGCFW 84
          EPAKKNQKHKYPRKQKGWCGCFW
Sbjct: 61 EPAKKNQKHKYPRKQKGWCGCFW 83

[Close]

BLAST of Csa5G591770 vs. NCBI nr
Match: gi|659090596|ref|XP_008446098.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 4.1e-37
Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKY 60
          M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK 
Sbjct: 1  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQ 60

Query: 61 EPAKK-NQKHKYPRKQKGWCGCFW 84
          EPAK+  QK KYPRKQKGWC CFW
Sbjct: 61 EPAKEIKQKQKYPRKQKGWCSCFW 84

[Close]

BLAST of Csa5G591770 vs. NCBI nr
Match: gi|743803597|ref|XP_010926960.1| (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Elaeis guineensis])

HSP 1 Score: 82.0 bits (201), Expect = 5.3e-13
Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1


Query: 3  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEP 62
          S++KG  LPKFGDWD  NPA+AEGFTVIFN+ARD KK  G  G  N+  P +N     +P
Sbjct: 19 SSEKGRPLPKFGDWDVNNPASAEGFTVIFNKARDEKKTSGNPGVANS--PRRNNMGGLKP 78

Query: 63 AKKNQKHKYPRKQKGWCGC 82
             ++ ++YPRK K W  C
Sbjct: 79 ---DETYQYPRKSKKWFCC 92

[Close]

BLAST of Csa5G591770 vs. NCBI nr
Match: gi|743803601|ref|XP_010926961.1| (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Elaeis guineensis])

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 1


Query: 3  SAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPPQNQSQKYEP 62
          +++KG  LPKFGDWD  NPA+AEGFTVIFN+ARD KK  G  G  N+  P +N     +P
Sbjct: 2  TSEKGRPLPKFGDWDVNNPASAEGFTVIFNKARDEKKTSGNPGVANS--PRRNNMGGLKP 61

Query: 63 AKKNQKHKYPRKQKGWCGC 82
             ++ ++YPRK K W  C
Sbjct: 62 ---DETYQYPRKSKKWFCC 75

[Close]

BLAST of Csa5G591770 vs. NCBI nr
Match: gi|567188976|ref|XP_006404257.1| (hypothetical protein EUTSA_v10011071mg [Eutrema salsugineum])

HSP 1 Score: 79.3 bits (194), Expect = 3.5e-12
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKK-NGGAAGTPNNVIPPQNQSQK 60
          MA+  KG  LPKFG+WD  NPA+AEGFTVIFN+ARD+KK    A   P +++ PQ   + 
Sbjct: 1  MATGNKGRQLPKFGEWDASNPASAEGFTVIFNKARDDKKTKKTAVAGPESLVSPQINDES 60

Query: 61 YEPAK--KNQKHKYPRKQKGWCGCF 83
          ++  K   N+K + PR++K W  CF
Sbjct: 61 HQNNKHHNNRKSQTPREKKKWL-CF 84

The following BLAST results are available for this feature:

BLAST of Csa5G591770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIN4_ARATH	9.8e-07	45.10	RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1	[more]

BLAST of Csa5G591770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTF9_CUCSA	1.4e-44	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591770 PE=4 SV=1	[more]
M0TVS8_MUSAM	2.4e-12	49.37	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
V4L5T8_EUTSA	2.4e-12	48.24	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011071mg PE=4 SV=1	[more]
M0TEE7_MUSAM	3.2e-12	46.84	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0A0LRE5_CUCSA	7.0e-12	50.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050070 PE=4 SV=1	[more]

BLAST of Csa5G591770 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48450.1	5.1e-14	45.16	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	3.7e-12	51.56	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	3.7e-12	44.87	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	4.8e-12	54.24	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	5.0e-09	55.36	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of Csa5G591770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435021\|ref\|XP_004135294.1\|	2.0e-44	100.00	PREDICTED: RPM1-interacting protein 4 [Cucumis sativus]	[more]
gi\|659090596\|ref\|XP_008446098.1\|	4.1e-37	86.90	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
gi\|743803597\|ref\|XP_010926960.1\|	5.3e-13	51.90	PREDICTED: RPM1-interacting protein 4-like isoform X1 [Elaeis guineensis]	[more]
gi\|743803601\|ref\|XP_010926961.1\|	1.2e-12	50.63	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Elaeis guineensis]	[more]
gi\|567188976\|ref\|XP_006404257.1\|	3.5e-12	48.24	hypothetical protein EUTSA_v10011071mg [Eutrema salsugineum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009749	response to glucose
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
biological_process	GO:0038032	termination of G-protein coupled receptor signaling pathway
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009611	response to wounding
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009750	response to fructose
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009733	response to auxin
biological_process	GO:0042127	regulation of cell proliferation
biological_process	GO:0043547	positive regulation of GTPase activity
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0009738	abscisic acid-activated signaling pathway
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU110936	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G591770.1	Csa5G591770.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU110936	CU110936	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 5..39 score: 4.6
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 1..83 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G591770	Cla010001	Watermelon (97103) v1	cuwmB401
Csa5G591770	MELO3C011903	Melon (DHL92) v3.5.1	cumeB374
Csa5G591770	ClCG05G026180	Watermelon (Charleston Gray)	cuwcgB394
Csa5G591770	MELO3C011903.2	Melon (DHL92) v3.6.1	cumedB357
Csa5G591770	Cla97C05G108380	Watermelon (97103) v2	cuwmbB383
Csa5G591770	Bhi07G001490	Wax gourd	cuwgoB512
Csa5G591770	CSPI05G21790	Wild cucumber (PI 183967)	cpicuB239
Csa5G591770	Cucsa.075340	Cucumber (Gy14) v1	cgycuB073
Csa5G591770	CmoCh04G019010	Cucurbita moschata (Rifu)	cmocuB739
Csa5G591770	CsGy5G021300	Cucumber (Gy14) v2	cgybcuB223
Csa5G591770	Carg14290	Silver-seed gourd	carcuB0271

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G591770	Melon (DHL92) v3.6.1	cumedB359
Csa5G591770	Melon (DHL92) v3.6.1	cumedB376
Csa5G591770	Silver-seed gourd	carcuB0530
Csa5G591770	Silver-seed gourd	carcuB0648
Csa5G591770	Watermelon (97103) v2	cuwmbB400
Csa5G591770	Wax gourd	cuwgoB489
Csa5G591770	Cucumber (Chinese Long) v2	cucuB064
Csa5G591770	Cucumber (Gy14) v1	cgycuB551
Csa5G591770	Cucurbita maxima (Rimu)	cmacuB189
Csa5G591770	Cucurbita maxima (Rimu)	cmacuB413
Csa5G591770	Cucurbita maxima (Rimu)	cmacuB749
Csa5G591770	Cucurbita maxima (Rimu)	cmacuB803
Csa5G591770	Cucurbita moschata (Rifu)	cmocuB173
Csa5G591770	Cucurbita moschata (Rifu)	cmocuB402
Csa5G591770	Cucurbita moschata (Rifu)	cmocuB793
Csa5G591770	Melon (DHL92) v3.5.1	cumeB377
Csa5G591770	Melon (DHL92) v3.5.1	cumeB393
Csa5G591770	Watermelon (Charleston Gray)	cuwcgB411
Csa5G591770	Watermelon (97103) v1	cuwmB376
Csa5G591770	Cucurbita pepo (Zucchini)	cpecuB047
Csa5G591770	Cucurbita pepo (Zucchini)	cpecuB118
Csa5G591770	Cucurbita pepo (Zucchini)	cpecuB440
Csa5G591770	Cucurbita pepo (Zucchini)	cpecuB836
Csa5G591770	Bottle gourd (USVL1VR-Ls)	culsiB368
Csa5G591770	Bottle gourd (USVL1VR-Ls)	culsiB388
Csa5G591770	Cucumber (Gy14) v2	cgybcuB076