Csa5G563790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G563790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionB3 domain-containing protein; contains IPR005508 (Protein of unknown function DUF313), IPR015300 (DNA-binding pseudobarrel domain)
LocationChr5 : 19605700 .. 19606039 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

mRNA sequence

ATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

Coding sequence (CDS)

ATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAA

Protein sequence

MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC*
Homology
[Close]
BLAST of Csa5G563790 vs. Swiss-Prot
Match: Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 5   LLSFDFATEEESELLSEQENKNKR-GINVMVLDDVLEERMVCLKKWKI----GSGEV-YC 64
           LL  DF T  ES ++ E  N NK+ G+  +++D    +  V LK+W++    G G   Y 
Sbjct: 253 LLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYN 312

Query: 65  LMTHWNSMVEKRGLKSGEEIQVWSFR 85
           L+  WN +VE  GLK G+ I VWSFR
Sbjct: 313 LICGWNDVVEANGLKEGDNISVWSFR 338

[Close]
BLAST of Csa5G563790 vs. Swiss-Prot
Match: Y3518_ARATH (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 5   LLSFDFATEEESELLSEQ-ENKNKRGINVMVLDDVLEERMVCLKKWKI----GSGEV-YC 64
           LL  DF T  ES ++ +  +N  K G+  +++D   ++  V LK+W++    G G   Y 
Sbjct: 240 LLRNDFLTSVESRIIDKDIKNDKKIGVGAILVDQRCKKWGVMLKRWEMKKESGKGSWNYN 299

Query: 65  LMTHWNSMVEKRGLKSGEEIQVWSFR 85
           L+  WN +VE  GLK G+ I +WSFR
Sbjct: 300 LICGWNDIVEANGLKEGDNISLWSFR 325

[Close]
BLAST of Csa5G563790 vs. Swiss-Prot
Match: Y5405_ARATH (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 5   LLSFDFATEEESELLSEQ-ENKNKRGINVMVLDDVLEERMVCLKKWKI----GSGE-VYC 64
           LL  DF T  ES +++E   N NK G+  +++D   ++  V LK+W++    G G   Y 
Sbjct: 243 LLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRCKKWGVMLKRWEMKKESGKGSWSYN 302

Query: 65  LMTHWNSMVEKRGLKSGEEIQVWSFR 85
           L+  WN +VE   LK G+ I +WSFR
Sbjct: 303 LICGWNDIVEANRLKEGDNITLWSFR 328

[Close]
BLAST of Csa5G563790 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-07
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 1 

Query: 9   DFATEEESELLSEQE--NKNKRGINVMVLDDVLEERMVCLKKWKI--GSGEVY---CLMT 68
           DF T +ES L+ E E  N+   G+   ++D   ++  +  K+W +   SG  Y    L  
Sbjct: 211 DFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRG 270

Query: 69  HWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALV 100
            W+++VE  GLK G++I +WSFR +D      LC ALV
Sbjct: 271 EWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of Csa5G563790 vs. Swiss-Prot
Match: Y1593_ARATH (B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana GN=At1g05930 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 1 

Query: 4   KLLSFDFATEEESELLSEQE-NKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLMTH 63
           +L+S DF   EE  +L E   N    G+  +++D   ++  V LK+W    G+ Y L   
Sbjct: 203 RLISNDFLKPEERSILEEDTYNDETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCG 262

Query: 64  WNSMVEKRGLKSGEEIQVWSFRKD 87
           WN +V+   LK+G++I +W+FR D
Sbjct: 263 WNDVVKANKLKAGDDICLWAFRCD 282

[Close]
BLAST of Csa5G563790 vs. TrEMBL
Match: A0A0A0KPF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G563790 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.6e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM
Sbjct: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 104

[Close]
BLAST of Csa5G563790 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-48
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEES+LLSEQENKNK GINVM+LDDVLEERM+CLKKWKIGSGEVYCLM
Sbjct: 32  MNTKQLSFDFATEEESKLLSEQENKNKMGINVMLLDDVLEERMLCLKKWKIGSGEVYCLM 91

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           T WN MVE+RGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 92  TKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 135

[Close]
BLAST of Csa5G563790 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 9.9e-48
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEES+LLSEQENKNK GINVM+LDDVLEERM+CLKKWKIGSG VYCLM
Sbjct: 162 MNTKQLSFDFATEEESKLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLM 221

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           T WN MVE+RGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 222 TKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Csa5G563790 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.1e-44
Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTKLLSFDFATEEES+LLSEQENKNK+GINVM+LDD LEER++CLKKWKIGSGEVYCLM
Sbjct: 165 MNTKLLSFDFATEEESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLM 224

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVK 101
           T WN MVEKRG KSGEEIQVWSFRKDDE EAHRLC AL K
Sbjct: 225 TQWNLMVEKRGFKSGEEIQVWSFRKDDEYEAHRLCFALEK 264

[Close]
BLAST of Csa5G563790 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-43
Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEES+LLSEQENKNK GINVM LDDVLEERM+CLKKWKIGSG VYCLM
Sbjct: 146 MNTKQLSFDFATEEESKLLSEQENKNKMGINVMTLDDVLEERMLCLKKWKIGSGYVYCLM 205

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVK 101
           T WN MVE+RGLKSGEEIQVWSFRKDDEDEAHRLC AL K
Sbjct: 206 TKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHRLCFALEK 245

[Close]
BLAST of Csa5G563790 vs. TAIR10
Match: AT3G24850.1 (AT3G24850.1 Domain of unknown function (DUF313) )

HSP 1 Score: 60.8 bits (146), Expect = 5.6e-10
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 5   LLSFDFATEEESELLSEQENKNKR-GINVMVLDDVLEERMVCLKKWKI----GSGEV-YC 64
           LL  DF T  ES ++ E  N NK+ G+  +++D    +  V LK+W++    G G   Y 
Sbjct: 253 LLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWELKKESGKGSWNYN 312

Query: 65  LMTHWNSMVEKRGLKSGEEIQVWSFR 85
           L+  WN +VE  GLK G+ I VWSFR
Sbjct: 313 LICGWNDVVEANGLKEGDNISVWSFR 338

[Close]
BLAST of Csa5G563790 vs. TAIR10
Match: AT5G24050.1 (AT5G24050.1 Domain of unknown function (DUF313) )

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 5   LLSFDFATEEESELLSEQ-ENKNKRGINVMVLDDVLEERMVCLKKWKI----GSGE-VYC 64
           LL  DF T  ES +++E   N NK G+  +++D   ++  V LK+W++    G G   Y 
Sbjct: 243 LLRNDFLTSVESIIINEDINNNNKIGVGAILVDQRCKKWGVMLKRWEMKKESGKGSWSYN 302

Query: 65  LMTHWNSMVEKRGLKSGEEIQVWSFR 85
           L+  WN +VE   LK G+ I +WSFR
Sbjct: 303 LICGWNDIVEANRLKEGDNITLWSFR 328

[Close]
BLAST of Csa5G563790 vs. TAIR10
Match: AT1G05920.1 (AT1G05920.1 Domain of unknown function (DUF313) )

HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 1 

Query: 9   DFATEEESELLSEQE--NKNKRGINVMVLDDVLEERMVCLKKWKI--GSGEVY---CLMT 68
           DF T +ES L+ E E  N+   G+   ++D   ++  +  K+W +   SG  Y    L  
Sbjct: 211 DFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWSFVLRG 270

Query: 69  HWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALV 100
            W+++VE  GLK G++I +WSFR +D      LC ALV
Sbjct: 271 EWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of Csa5G563790 vs. TAIR10
Match: AT1G05930.1 (AT1G05930.1 Domain of unknown function (DUF313) )

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-08
Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 1 

Query: 4   KLLSFDFATEEESELLSEQE-NKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLMTH 63
           +L+S DF   EE  +L E   N    G+  +++D   ++  V LK+W    G+ Y L   
Sbjct: 203 RLISNDFLKPEERSILEEDTYNDETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCG 262

Query: 64  WNSMVEKRGLKSGEEIQVWSFRKD 87
           WN +V+   LK+G++I +W+FR D
Sbjct: 263 WNDVVKANKLKAGDDICLWAFRCD 282

[Close]
BLAST of Csa5G563790 vs. TAIR10
Match: AT2G31720.1 (AT2G31720.1 Domain of unknown function (DUF313) )

HSP 1 Score: 51.2 bits (121), Expect = 4.5e-07
Identity = 27/87 (31.03%), Postives = 45/87 (51.72%), Query Frame = 1 

Query: 4   KLLSFDFATEEESELLSEQENK---NKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 63
           ++L  DF  EEE E +     K   + +G +V+V++    +R + LK+W + S   Y L 
Sbjct: 171 QILDMDFLNEEELEKIDRHHKKISASDKGADVIVVNSKGLQRKLKLKRWDMTSTSNYVLG 230

Query: 64  THWNSMVEKRGLKSGEEIQVWSFRKDD 88
             WN +V    L+ G  +++WSF   D
Sbjct: 231 LGWNKVVTDNILQRGTRLRIWSFHSPD 257

[Close]
BLAST of Csa5G563790 vs. NCBI nr
Match: gi|700196296|gb|KGN51473.1| (hypothetical protein Csa_5G563790 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 6.6e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM
Sbjct: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 104

[Close]
BLAST of Csa5G563790 vs. NCBI nr
Match: gi|778708611|ref|XP_004142863.2| (PREDICTED: B3 domain-containing protein At2g31420-like, partial [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 6.6e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM
Sbjct: 26  MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 85

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 86  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 129

[Close]
BLAST of Csa5G563790 vs. NCBI nr
Match: gi|778708608|ref|XP_011656245.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-48
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEES+LLSEQENKNK GINVM+LDDVLEERM+CLKKWKIGSGEVYCLM
Sbjct: 32  MNTKQLSFDFATEEESKLLSEQENKNKMGINVMLLDDVLEERMLCLKKWKIGSGEVYCLM 91

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           T WN MVE+RGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 92  TKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 135

[Close]
BLAST of Csa5G563790 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-47
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEES+LLSEQENKNK GINVM+LDDVLEERM+CLKKWKIGSG VYCLM
Sbjct: 162 MNTKQLSFDFATEEESKLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLM 221

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           T WN MVE+RGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC
Sbjct: 222 TKWNLMVEERGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Csa5G563790 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-46
Identity = 92/104 (88.46%), Postives = 97/104 (93.27%), Query Frame = 1 

Query: 1   MNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLM 60
           MNTK LSFDFATEEE++LLSEQENKNKRGINVM+LDDVLEERM+CLKKWKIGSGEVYCLM
Sbjct: 84  MNTKQLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKIGSGEVYCLM 143

Query: 61  THWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVKLATC 105
           T WN MVE+RG K GEEIQVWSFRKDDE EAHRLC ALVKLATC
Sbjct: 144 TRWNLMVEERGFKGGEEIQVWSFRKDDEYEAHRLCFALVKLATC 187

The following BLAST results are available for this feature:
BLAST of Csa5G563790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3485_ARATH1.0e-0840.70Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g2... [more]
Y3518_ARATH3.2e-0737.21B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana GN=At3g25182 PE=2... [more]
Y5405_ARATH3.2e-0738.37B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana GN=At5g24050 PE=2... [more]
Y1592_ARATH5.5e-0735.71B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y1593_ARATH1.2e-0634.52B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana GN=At1g05930 PE=2... [more]
BLAST of Csa5G563790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPF2_CUCSA4.6e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G563790 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA2.6e-4892.31Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
A0A0A0KP87_CUCSA9.9e-4891.35Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA5.1e-4488.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA1.1e-4389.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
BLAST of Csa5G563790 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24850.15.6e-1040.70 Domain of unknown function (DUF313) [more]
AT5G24050.11.8e-0838.37 Domain of unknown function (DUF313) [more]
AT1G05920.13.1e-0835.71 Domain of unknown function (DUF313) [more]
AT1G05930.16.9e-0834.52 Domain of unknown function (DUF313) [more]
AT2G31720.14.5e-0731.03 Domain of unknown function (DUF313) [more]
BLAST of Csa5G563790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196296|gb|KGN51473.1|6.6e-53100.00hypothetical protein Csa_5G563790 [Cucumis sativus][more]
gi|778708611|ref|XP_004142863.2|6.6e-53100.00PREDICTED: B3 domain-containing protein At2g31420-like, partial [Cucumis sativus... [more]
gi|778708608|ref|XP_011656245.1|3.8e-4892.31PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|778703844|ref|XP_011655441.1|1.4e-4791.35PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|3.5e-4688.46PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005508DUF313
IPR015300DNA-bd_pseudobarrel_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU154723cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G563790.1Csa5G563790.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU154723CU154723transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 3..69
score: 7.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 22..86
score: 3.5
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 4..101
score: 1.0
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 4..101
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G563790MELO3C005283Melon (DHL92) v3.5.1cumeB346
Csa5G563790MELO3C005256Melon (DHL92) v3.5.1cumeB355
Csa5G563790Lsi09G006930Bottle gourd (USVL1VR-Ls)culsiB327
Csa5G563790MELO3C033980.2Melon (DHL92) v3.6.1cumedB329
Csa5G563790MELO3C005256.2Melon (DHL92) v3.6.1cumedB334
Csa5G563790Bhi12G000808Wax gourdcuwgoB450
Csa5G563790CSPI05G19300Wild cucumber (PI 183967)cpicuB239
Csa5G563790CsGy5G019090Cucumber (Gy14) v2cgybcuB229
Csa5G563790CsGy5G018840Cucumber (Gy14) v2cgybcuB223
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G563790Watermelon (Charleston Gray)cuwcgB368
Csa5G563790Watermelon (Charleston Gray)cuwcgB372
Csa5G563790Watermelon (97103) v1cuwmB413
Csa5G563790Watermelon (97103) v1cuwmB416
Csa5G563790Cucurbita pepo (Zucchini)cpecuB177
Csa5G563790Cucurbita pepo (Zucchini)cpecuB189
Csa5G563790Cucurbita pepo (Zucchini)cpecuB424
Csa5G563790Bottle gourd (USVL1VR-Ls)culsiB329
Csa5G563790Melon (DHL92) v3.6.1cumedB343
Csa5G563790Silver-seed gourdcarcuB0459
Csa5G563790Silver-seed gourdcarcuB0895
Csa5G563790Silver-seed gourdcarcuB0969
Csa5G563790Watermelon (97103) v2cuwmbB344
Csa5G563790Watermelon (97103) v2cuwmbB340
Csa5G563790Wax gourdcuwgoB443
Csa5G563790Cucumber (Gy14) v1cgycuB398
Csa5G563790Cucurbita maxima (Rimu)cmacuB294
Csa5G563790Cucurbita maxima (Rimu)cmacuB301
Csa5G563790Cucurbita maxima (Rimu)cmacuB732
Csa5G563790Cucurbita moschata (Rifu)cmocuB281
Csa5G563790Cucurbita moschata (Rifu)cmocuB289
Csa5G563790Cucurbita moschata (Rifu)cmocuB723