Csa5G453680 (gene) Cucumber (Chinese Long) v2

NameCsa5G453680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 16058279 .. 16058620 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCCCACCAAAATAAAACCATCTTCTTTGACCTCCGCCCTGAAACTCACTTCCTTAAGCCCAGTTGGACTCCAGTGGATACACATCTTCACGGCACGACCCCCACACCAAGACACTAGGGAAGGATTATCTCCTTTGTTCTCAAAAAAGGGAGGGACGTCTAACGCCGCGACTGAACCTCCCCTAAATTCCTGCTTTCTCTGCCCTTCAATAACACGAAAATCCCAAGTTGAAACAAAAAATCTTGATTTTGAAGCAATGACTCGAGTCGAATCAACTCCTTCGCCTCTAAAACTAAGCCACAAATCCCCGCAGCCAGATTTGTGCAAAAGACCTTGA

mRNA sequence

ATGCATCCCACCAAAATAAAACCATCTTCTTTGACCTCCGCCCTGAAACTCACTTCCTTAAGCCCAGTTGGACTCCAGTGGATACACATCTTCACGGCACGACCCCCACACCAAGACACTAGGGAAGGATTATCTCCTTTGTTCTCAAAAAAGGGAGGGACGTCTAACGCCGCGACTGAACCTCCCCTAAATTCCTGCTTTCTCTGCCCTTCAATAACACGAAAATCCCAAGTTGAAACAAAAAATCTTGATTTTGAAGCAATGACTCGAGTCGAATCAACTCCTTCGCCTCTAAAACTAAGCCACAAATCCCCGCAGCCAGATTTGTGCAAAAGACCTTGA

Coding sequence (CDS)

ATGCATCCCACCAAAATAAAACCATCTTCTTTGACCTCCGCCCTGAAACTCACTTCCTTAAGCCCAGTTGGACTCCAGTGGATACACATCTTCACGGCACGACCCCCACACCAAGACACTAGGGAAGGATTATCTCCTTTGTTCTCAAAAAAGGGAGGGACGTCTAACGCCGCGACTGAACCTCCCCTAAATTCCTGCTTTCTCTGCCCTTCAATAACACGAAAATCCCAAGTTGAAACAAAAAATCTTGATTTTGAAGCAATGACTCGAGTCGAATCAACTCCTTCGCCTCTAAAACTAAGCCACAAATCCCCGCAGCCAGATTTGTGCAAAAGACCTTGA

Protein sequence

MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATEPPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP*
BLAST of Csa5G453680 vs. TrEMBL
Match: A0A0A0KTS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G453680 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 6.1e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1

Query: 1   MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE 60
           MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE
Sbjct: 1   MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE 60

Query: 61  PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP 114
           PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP
Sbjct: 61  PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP 113

BLAST of Csa5G453680 vs. NCBI nr
Match: gi|700195934|gb|KGN51111.1| (hypothetical protein Csa_5G453680 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 8.7e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1

Query: 1   MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE 60
           MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE
Sbjct: 1   MHPTKIKPSSLTSALKLTSLSPVGLQWIHIFTARPPHQDTREGLSPLFSKKGGTSNAATE 60

Query: 61  PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP 114
           PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP
Sbjct: 61  PPLNSCFLCPSITRKSQVETKNLDFEAMTRVESTPSPLKLSHKSPQPDLCKRP 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KTS0_CUCSA6.1e-59100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G453680 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700195934|gb|KGN51111.1|8.7e-59100.00hypothetical protein Csa_5G453680 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU116545cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G453680.1Csa5G453680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU116545CU116545transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None