Csa5G218870 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTAGAAGTCTGAATCACTTGTGGTTACCTGTTTTCTTTAACTGTTTATTTCACTGCGATTGTTCCATTGTTCCTTGCTCTGCCTTTTTAGCTAATCTTGCACTATTTTCCCTGTTAGCAACAATTTCACATATTTCGAACTTTGTTTCACCTTTCAGCTTCTACGATGGGGCATGGCAGAAAGTGAGCTGGATAGACTGAAATTGAGGTTTACGCAGTTGTATTACAGAGGCCTTCTATCTGTGAGTATCTTCAATATATTTTTCTCCTAGATTGGCTCGTTCCTTGGATTGATCATGGAAATTAGTTAAATATTTTCTTATTCAGCTTAAAACACCAGTTGAAGGTCTCAAGGAATGGCTGGATGCTGTGTCTACAGCTCGCATTCCCTGTGCCATTGTTTCCAGTCTTGATCGGAAACACATGCTTGAAGCATTGGACCAAATGAGTTTGAAGAAATATTTTCAGGTTGGTATTGATTCCTCAAACCTTTTTTTGTATTCAGAGATAGAAGTTCGAGTAACTTTACTGTTAAGTCTAAGCCAGATTGTACAAATGAGAAAATACATTACTTGACACAGTTTTCATGATTTCGTTCAAGCTGCATTTTACCTGTTGATAACATTTCACCTCAACCATTGGTAAAAGGAAAAGACAAATCAAAATTGGTGGATTGTGAATTATGAAATGATTGCACGTGAAAGATAAAAATTGGGTGATTCCAGGGAATTAGACCTGCCAACATTTTATTTTATGCTTATTATCGTTTTTGCAGGCAATCATAACAGAGGAAGACGGTATGGAGTCAATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTGAGGTCCAATTTGCGAACTGTTAAATTCAACTGACATACAAAGTGAAAATACCATATTTTTCTTTGTTGCATTGGCTACCTCCGCAATAATTTAACTACTGCTTATACACATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTTGAAGATGATCCTCGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTATAGCATTGATTGGTGCCCACCGCGCGTATGTGCCTCGTCATAAATAGATTAAACTAGTAAAATACTATGCACACATGTGCAATGCAGTGCATGTCAAACATATCTAGTTCTTTGTGCATTTAACGAATATCTCAGACCGTCAGACTGATATGGGTACCTGGATGATATTGTGCAGATATGATCTGGTGCAGGCTGATCTTGCAGTTGGTAGCTACAACGAGCTTTCAGTGATTAACTTGCGGAGATTATTTGCTAATAAGGGTTCGACATTTATGGATCTGCAGAAGCAGAGTGTCGAAAAAGCTCCATCAAAAAGAAAGCTTACCATCGATACAATATTCTGATTCTTTTGTTTTACATTCCTCTGTTCTTTCCATGTATTTAAGTTGGTCATGATGTCAATTCTTTTGTTGACAAAACTCTGAAATCCTAAAAACTTTAAAATGAAATTAGAAGAGTTAGTAGATAAATATGGCTTTACACATTTGACTAACACGTCCTTCAGTTCAGGCTATTAAGCAGAAAGCTTCAGTAAGATTCTAGAATGCAATTGTGTTAGCTGTTAATTTTGTTTCTCATCTCAAAAGAGTTAGTATGGTTGATCAAAAGCTTTGTAAAACTCAAATCTTTCAAATGGAAGGTGAACAT ATGGCGGCTAGAAGTCTGAATCACTTGTGGTTACCTGTTTTCTTTAACTGTTTATTTCACTGCGATTGTTCCATTCTTCTACGATGGGGCATGGCAGAAAGTGAGCTGGATAGACTGAAATTGAGGTTTACGCAGTTGTATTACAGAGGCCTTCTATCTCTTAAAACACCAGTTGAAGGTCTCAAGGAATGGCTGGATGCTGTGTCTACAGCTCGCATTCCCTGTGCCATTGTTTCCAGTCTTGATCGGAAACACATGCTTGAAGCATTGGACCAAATGAGTTTGAAGAAATATTTTCAGGCAATCATAACAGAGGAAGACGGTATGGAGTCAATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTTGAAGATGATCCTCGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTATAGCATTGATTGGTGCCCACCGCGCATATGATCTGGTGCAGGCTGATCTTGCAGTTGGTAGCTACAACGAGCTTTCAGTGATTAACTTGCGGAGATTATTTGCTAATAAGGGTTCGACATTTATGGATCTGCAGAAGCAGAGTGTCGAAAAAGCTCCATCAAAAAGAAAGCTTACCATCGATACAATATTCTGA ATGGCGGCTAGAAGTCTGAATCACTTGTGGTTACCTGTTTTCTTTAACTGTTTATTTCACTGCGATTGTTCCATTCTTCTACGATGGGGCATGGCAGAAAGTGAGCTGGATAGACTGAAATTGAGGTTTACGCAGTTGTATTACAGAGGCCTTCTATCTCTTAAAACACCAGTTGAAGGTCTCAAGGAATGGCTGGATGCTGTGTCTACAGCTCGCATTCCCTGTGCCATTGTTTCCAGTCTTGATCGGAAACACATGCTTGAAGCATTGGACCAAATGAGTTTGAAGAAATATTTTCAGGCAATCATAACAGAGGAAGACGGTATGGAGTCAATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTTGAAGATGATCCTCGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTATAGCATTGATTGGTGCCCACCGCGCATATGATCTGGTGCAGGCTGATCTTGCAGTTGGTAGCTACAACGAGCTTTCAGTGATTAACTTGCGGAGATTATTTGCTAATAAGGGTTCGACATTTATGGATCTGCAGAAGCAGAGTGTCGAAAAAGCTCCATCAAAAAGAAAGCTTACCATCGATACAATATTCTGA MAARSLNHLWLPVFFNCLFHCDCSILLRWGMAESELDRLKLRFTQLYYRGLLSLKTPVEGLKEWLDAVSTARIPCAIVSSLDRKHMLEALDQMSLKKYFQAIITEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHRAYDLVQADLAVGSYNELSVINLRRLFANKGSTFMDLQKQSVEKAPSKRKLTIDTIF*
BLAST of Csa5G218870 vs. TrEMBL
Match: A0A0A0KSI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218870 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 4.2e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Csa5G218870 vs. TrEMBL
Match: W9QLW0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012308 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 7.9e-84 Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 1
BLAST of Csa5G218870 vs. TrEMBL
Match: M5XCY0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007520mg PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.1e-82 Identity = 157/189 (83.07%), Postives = 171/189 (90.48%), Query Frame = 1
BLAST of Csa5G218870 vs. TrEMBL
Match: A0A097PQC4_PRUPE (Haloacid dehalogenase-like hydrolase superfamily protein (Fragment) OS=Prunus persica PE=2 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 5.7e-82 Identity = 156/188 (82.98%), Postives = 170/188 (90.43%), Query Frame = 1
BLAST of Csa5G218870 vs. TrEMBL
Match: V4TH91_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031841mg PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 6.3e-81 Identity = 153/189 (80.95%), Postives = 169/189 (89.42%), Query Frame = 1
BLAST of Csa5G218870 vs. TAIR10
Match: AT3G10970.1 (AT3G10970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 300.4 bits (768), Expect = 8.6e-82 Identity = 144/189 (76.19%), Postives = 169/189 (89.42%), Query Frame = 1
BLAST of Csa5G218870 vs. TAIR10
Match: AT4G11570.1 (AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15 Identity = 52/189 (27.51%), Postives = 99/189 (52.38%), Query Frame = 1
BLAST of Csa5G218870 vs. NCBI nr
Match: gi|700195544|gb|KGN50721.1| (hypothetical protein Csa_5G218870 [Cucumis sativus]) HSP 1 Score: 428.7 bits (1101), Expect = 6.0e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Csa5G218870 vs. NCBI nr
Match: gi|449457419|ref|XP_004146446.1| (PREDICTED: pseudouridine-5'-phosphatase [Cucumis sativus]) HSP 1 Score: 372.1 bits (954), Expect = 6.6e-100 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Csa5G218870 vs. NCBI nr
Match: gi|659114142|ref|XP_008456924.1| (PREDICTED: uncharacterized protein LOC103496727 [Cucumis melo]) HSP 1 Score: 360.9 bits (925), Expect = 1.5e-96 Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 1
BLAST of Csa5G218870 vs. NCBI nr
Match: gi|703063878|ref|XP_010087063.1| (hypothetical protein L484_012308 [Morus notabilis]) HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83 Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 1
BLAST of Csa5G218870 vs. NCBI nr
Match: gi|657955734|ref|XP_008369339.1| (PREDICTED: uncharacterized protein LOC103432900 isoform X1 [Malus domestica]) HSP 1 Score: 316.6 bits (810), Expect = 3.3e-83 Identity = 156/189 (82.54%), Postives = 173/189 (91.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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