Carg00178 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00178
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Haloacid dehalogenase-like hydrolase superfamily protein
Location	Cucurbita_argyrosperma_scaffold_001 : 922847 .. 925607 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATATCCCACTACGGCTAAACGGTAAGAAAAGGGGTGCGGCGTGGAGAACGGATTGCCTGGTGGATTCGTTACGCTCTACGAGCCCTTCTTCTTCGCGAAATTAAAGGGCAAAACCCAAAAATCTAAGTAGCTTTTTAGCGTCACCCTCTACGGCTATCGCCCCCTTCGTTGTACACTAATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGGTACCCTTTTTCCTCTTCTTTCCCCCCATTTCGTTACTTCTTTGATGGTGGATTCTTCTCATTTTTACAGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGTACTAAATTTAACATTCTTTTCGTAGTTAAACCGATTAACCTTTGTAATTTGATGCTCTTAACTGATGGGGTTTGCATATCTTTCAATGTTTCAAGTTTGTGATCAATGTTTGTGTGTCAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGTAACTTCTATGTTCTTAATACCCATATAACCAAATGTCCTGATTATGAACATGTTTTTGTCTGATGATGTGTATAATTCATTTTCAGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGTTTTGTTCTATTTCTTTGGAAATTACTGCACCGATGCATATATGAAATCTTTTATTTAGAATTTTCATAATCTCTTACTGAATTAAGAAATCTTTTAATCTCTGTTTTATTGTTTTGAATTTTGAATTGTAATTGCTATAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGGTTTGTAATTTTTTTTTTTCCCTTTTCCATTAGAGATATTATATATGTTTTAAGAAAGGTTGTCGGGTTTATTACCGAGGTTGAAAATTGAAATATGCTTCTCGTTGTACTTGCATACGAAAATATGTTTCTTATGGAGATGTAACTCGTGTTCTATGATGTTATCTTGGTACAAAAGGCGCTCCAATTTTCCGTCGAATATATGTTCTATGTCATGGTTAGGATTAAGAAGGTTTGGATACTTCTAACCTATACGTTTGCCTTATTATCAAAAGCTCTGTGGTTTCTTTCTATCAGAGCTAGACACCGGATGGTATGCCATTGAGGACGCCGAGCCCCAAAGGGGGTGGACACCGGGCGGTGTGCCAACGAGGATGTTGGGCTCTAAAAGGGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGAAACGAGTGCTAGTAAGGACGTTGGGTCCCGAAGGGGGATGGATTGTGAGATCCCTCGTCGGTTGGAGAGGGGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTGAAAACCTTGAGGAAAGCCCAAAGAGGACAATATCTGCTTGTGGTGTTTTTTTTTAATGCTTTTGAAAACTCTGCTCAACCTTTCAGCTTCTACGTTGGGGCATGGCAGAAAGCGAGCTGGATAGATTGAAATCGAGGTTTTCACAGTTGTATTATAGAGGTCTTCTTTCTGTGAGTACTCTCAATAAAATCTTTTTATAGACTGTTTTGTTCGTTCGATTGTTCGTGTAAATCATTTAAATACTTTCTTATTCAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGTAACCTTCTCTTGCATTCAAAGTTAGAACTAGAAGACTGAGTAACTTTATTCTAAGCCAAATAGTAAAACGAATACACCGTTATCATTTTTGTAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCGTATGTGCCTCACATCCTTACTTCTTAACGAATATCTCGATCATCAACTGATATAGAAACGATATGGTGCAGATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

mRNA sequence

CAAAATATCCCACTACGGCTAAACGGTAAGAAAAGGGGTGCGGCGTGGAGAACGGATTGCCTGGTGGATTCGTTACGCTCTACGAGCCCTTCTTCTTCGCGAAATTAAAGGGCAAAACCCAAAAATCTAAGTAGCTTTTTAGCGTCACCCTCTACGGCTATCGCCCCCTTCGTTGTACACTAATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

Coding sequence (CDS)

ATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

Protein sequence

MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDMQKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF

Homology

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_023544709.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.8 bits (1571), Expect = 6.7e-171
Identity = 326/420 (77.62%), Postives = 327/420 (77.86%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDGLMKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGLMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADHVLQKLLRWGMAESELDRMKSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNV+KAPSKRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPSKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_022941691.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 317/420 (75.48%), Postives = 323/420 (76.90%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFK+R+FKRFNFNKHSMVAM VSESGENGSL+RFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKYRSFKRFNFNKHSMVAMRVSESGENGSLNRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGF SF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFVSFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFL+RIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLQRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADHVLQKLLRWGMAESELDRLQSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQA+VTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAIVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNV+KAP KRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPLKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_022941854.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154
Identity = 300/420 (71.43%), Postives = 309/420 (73.57%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDC+CSNFRTSTAP SWTPTS+S+ KFRN KR N  KHSMVAMSVS SGENGSL RFP T
Sbjct: 1   MDCTCSNFRTSTAPFSWTPTSTSKLKFRNLKRLNSIKHSMVAMSVSGSGENGSLARFPLT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDGD+
Sbjct: 121 NDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDV 180

Query: 181 QKLMLYGGADHVLQ----------------------------KLKTPVDGLKEWLDAVST 240
           QKLMLY GAD VL                              LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADQVLXXXXXXXXXXSELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDTIF
Sbjct: 361 GAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_023541024.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 9.7e-154
Identity = 299/420 (71.19%), Postives = 308/420 (73.33%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDC+CSNFRTSTAP SW PTS+S+ KFRN KR N  KHSMVAMSVS SGENGSL RFP T
Sbjct: 1   MDCTCSNFRTSTAPFSWIPTSTSKLKFRNLKRLNSIKHSMVAMSVSGSGENGSLARFPLT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDGD+
Sbjct: 121 NDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDV 180

Query: 181 QKLMLYGGADHVLQ----------------------------KLKTPVDGLKEWLDAVST 240
           QKLMLY GAD VL                              LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADQVLXXXXXXXXXXSELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDTIF
Sbjct: 361 GAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_004146446.1 (PREDICTED: pseudouridine-5'-phosphatase [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 3.7e-153
Identity = 298/429 (69.46%), Postives = 313/429 (72.96%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRF---------KFRNFKRFNFNKHSMVAMSVSESGEN 60
           MDC+CSNFR+STAPLSWTPTSSSRF         KFRN KR N  KHSMV MSVS S EN
Sbjct: 1   MDCTCSNFRSSTAPLSWTPTSSSRFPQSQFVSKLKFRNLKRMNLTKHSMVVMSVSGSNEN 60

Query: 61  GSLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFS 120
           GSL RFP TPNKLFMQE IGAEYGEGFE+F PDG MKVDV                    
Sbjct: 61  GSLDRFPLTPNKLFMQEVIGAEYGEGFETFRPDGPMKVDV-------------------- 120

Query: 121 NPCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEG 180
                 DFLNDRLQEGFL+RIRYAMKPDEAYGL+FSWDNVVADTQTLKLN+WKQLASEEG
Sbjct: 121 ------DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSWDNVVADTQTLKLNAWKQLASEEG 180

Query: 181 KRVPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGL 240
           KRVPEDGD+QKLMLY GAD VLQK                            LKTPV+GL
Sbjct: 181 KRVPEDGDIQKLMLYEGADQVLQKLLRWGMAESELDRLKLRFTQLYYRGLLSLKTPVEGL 240

Query: 241 KEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAV 300
           KEWLDAVSTA IPCAIVSSLDRKHMLEALD+MSLKKYFQA++TEEDGMESMAHRFLSAAV
Sbjct: 241 KEWLDAVSTARIPCAIVSSLDRKHMLEALDQMSLKKYFQAIITEEDGMESMAHRFLSAAV 300

Query: 301 KVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHN 360
           K                                    LDRKPSKCVVFEDDPRGITAAHN
Sbjct: 301 K------------------------------------LDRKPSKCVVFEDDPRGITAAHN 360

Query: 361 CTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSK 393
           CTMMAIALIGAH AYDLVQADLAV S+NELSVINLRRLFANKGSTFM+LQKQ+V+KAPSK
Sbjct: 361 CTMMAIALIGAHRAYDLVQADLAVGSYNELSVINLRRLFANKGSTFMDLQKQSVEKAPSK 367

[Close]

BLAST of Carg00178 vs. TAIR10
Match: AT3G10970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 418.3 bits (1074), Expect = 5.2e-117
Identity = 236/428 (55.14%), Postives = 279/428 (65.19%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPT-------SSSRFKFRNFKRFNFNKHSMVAMSVSESG-ENG 60
           MDCSCS  R S+  +S  P+        SS   F+  K     K  +V  S S S  +NG
Sbjct: 1   MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVKQRLVVRSSSGSDYQNG 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
            ++ FP  PNKLFMQEAIGAEYGEGFE+F  DG +KVDV                     
Sbjct: 61  DVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DF N++LQ+GFL+RIRYAMKPDEAYGL+FSWDNVVADT++LKL +WKQLA+EEGK
Sbjct: 121 -----DFWNEKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQ----------------------------KLKTPVDGLK 240
            + E+ D+Q+LMLY GADHVL+                            KL  P +GL+
Sbjct: 181 EITEEVDIQRLMLYAGADHVLRKVLFWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           +WLDAV+TA IPCA+VS+LDRK+M+ AL+RM L+KYFQAVV+EEDGMES+AHRFLSAAVK
Sbjct: 241 DWLDAVTTARIPCAVVSNLDRKNMINALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRGITAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGITAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMA+ LIGAH AYDLVQADLAV +F ELSVINLRRLFANKGSTFM+ +KQ ++K+P KR
Sbjct: 361 TMMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKR 365

[Close]

BLAST of Carg00178 vs. TAIR10
Match: AT4G11570.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-16
Identity = 70/272 (25.74%), Postives = 118/272 (43.38%), Query Frame = 0


Query: 143 GLVFSWDNV-VADTQTLKLNSWKQLASEEGKRVPEDGDMQKL-----------MLYGGAD 202
           G +F W+ V + D   L   SW  LA EEGK  P    ++++           +L    D
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188

Query: 203 HV----LQKLKTPV------------DGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDR 262
            V    + K K  +            DG +E+++ +    IP A+VS+  R+ +  A+  
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248

Query: 263 MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHE 322
           + ++K+F  +V  ED                          Y G      F         
Sbjct: 249 IGIRKFFSVIVASED-------------------------VYRGKPDPEMF--------- 308

Query: 323 CVYLLQ-LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 382
            +Y  Q LD  P +C+VF +  + I AAH+  M  +A+   HP Y+L  A+L V   +EL
Sbjct: 309 -IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVASKHPIYELGAAELVVRRLDEL 365

[Close]

BLAST of Carg00178 vs. Swiss-Prot
Match: sp|Q9LDD5|PYRP2_ARATH (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRP2 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 70/272 (25.74%), Postives = 118/272 (43.38%), Query Frame = 0


Query: 143 GLVFSWDNV-VADTQTLKLNSWKQLASEEGKRVPEDGDMQKL-----------MLYGGAD 202
           G +F W+ V + D   L   SW  LA EEGK  P    ++++           +L    D
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188

Query: 203 HV----LQKLKTPV------------DGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDR 262
            V    + K K  +            DG +E+++ +    IP A+VS+  R+ +  A+  
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248

Query: 263 MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHE 322
           + ++K+F  +V  ED                          Y G      F         
Sbjct: 249 IGIRKFFSVIVASED-------------------------VYRGKPDPEMF--------- 308

Query: 323 CVYLLQ-LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 382
            +Y  Q LD  P +C+VF +  + I AAH+  M  +A+   HP Y+L  A+L V   +EL
Sbjct: 309 -IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVASKHPIYELGAAELVVRRLDEL 365

[Close]

BLAST of Carg00178 vs. Swiss-Prot
Match: sp|Q9X0Y1|P1254_THEMA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) OX=243274 GN=TM_1254 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 50/207 (24.15%), Postives = 80/207 (38.65%), Query Frame = 0


Query: 144 LVFSWDNVVADTQTLKLNSWKQLASEEGK-----------RVPEDGDMQKLM-------- 203
           ++F  D V+ DT+ L   +++++A   GK            VPE   +  LM        
Sbjct: 4   VIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDS 63

Query: 204 -------LYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSL 263
                  ++     V  +L     G++E L+ V +  I  A+ +S  ++  LE L R+ L
Sbjct: 64  LENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDL 123

Query: 264 KKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVY 322
           +KYF  +V                                G+Q ++      G     +Y
Sbjct: 124 EKYFDVMVF-------------------------------GDQVKN------GKPDPEIY 173

[Close]

BLAST of Carg00178 vs. TrEMBL
Match: tr|A0A1S3C4E5|A0A1S3C4E5_CUCME (pseudouridine-5'-phosphatase OS=Cucumis melo OX=3656 GN=LOC103496727 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 6.0e-152
Identity = 298/429 (69.46%), Postives = 311/429 (72.49%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRF---------KFRNFKRFNFNKHSMVAMSVSESGEN 60
           MDC+CSNFR+STAPLSWTPTSSSRF         KFRN KR N  KHSMV MSVS S EN
Sbjct: 1   MDCTCSNFRSSTAPLSWTPTSSSRFPQSQFVSKLKFRNLKRMNLTKHSMVVMSVSGSREN 60

Query: 61  GSLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFS 120
           GSL RFP TPNKLFMQE IGAEYGEGFE+F PDG MKVDV                    
Sbjct: 61  GSLDRFPLTPNKLFMQEVIGAEYGEGFETFRPDGPMKVDV-------------------- 120

Query: 121 NPCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEG 180
                 DFLNDRLQEGFL+RIRYAMKPDEAYGL+FSWDNVVADTQTLKLN+WKQLASEEG
Sbjct: 121 ------DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSWDNVVADTQTLKLNAWKQLASEEG 180

Query: 181 KRVPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGL 240
           KRVPEDGD+QKLMLY GAD VLQK                            LKTPVDGL
Sbjct: 181 KRVPEDGDIQKLMLYEGADQVLQKLLRWGMAESELDRLKLRFSQLYYRGLLSLKTPVDGL 240

Query: 241 KEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAV 300
           KEWL AVSTA IPCAIVSSLDRK MLEALDRMSLKKYFQA++TEEDGMESMAHRFLSAAV
Sbjct: 241 KEWLVAVSTARIPCAIVSSLDRKDMLEALDRMSLKKYFQAIITEEDGMESMAHRFLSAAV 300

Query: 301 KVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHN 360
           K                                    LDRKPSKCVVFEDDPRGITAAHN
Sbjct: 301 K------------------------------------LDRKPSKCVVFEDDPRGITAAHN 360

Query: 361 CTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSK 393
           CTMMAIALIGAH AYDLVQADLAV S+NELSVINLRRLFANKGSTFM+LQKQ+V+KAPSK
Sbjct: 361 CTMMAIALIGAHRAYDLVQADLAVGSYNELSVINLRRLFANKGSTFMDLQKQSVEKAPSK 367

[Close]

BLAST of Carg00178 vs. TrEMBL
Match: tr|A0A251QQ05|A0A251QQ05_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G261400 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.1e-132
Identity = 257/399 (64.41%), Postives = 287/399 (71.93%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTS-------SSRFKFRNFKRFNFNKHSMVAMSVSESGENGS 60
           MDC+CSNFR+S+  L     S        S+ +F   KR N  KH+ V  S     ENGS
Sbjct: 1   MDCACSNFRSSSLLLLGRSPSLHPHYSFPSKLRFLTLKRLNLAKHARVVRSACGFNENGS 60

Query: 61  LHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNP 120
           ++ F  TPNKLFMQEAIGAEYGEGFE+F PDG +KVDV                      
Sbjct: 61  VNGFSVTPNKLFMQEAIGAEYGEGFETFRPDGPLKVDV---------------------- 120

Query: 121 CGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKR 180
               DFLNDRLQEGFL+RIRYAMKPDEAYGL+FS+DNVVADT+TLKLNSWKQLASEEGK 
Sbjct: 121 ----DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSFDNVVADTRTLKLNSWKQLASEEGKE 180

Query: 181 VPEDGDMQKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALD 240
           +PED D+Q  MLY GADHVL KL  PV+GLKEWLDAVSTA IPCA+VSSLDR +M EAL+
Sbjct: 181 IPEDADVQGRMLYAGADHVLHKLSKPVEGLKEWLDAVSTARIPCAVVSSLDRINMTEALE 240

Query: 241 RMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVH 300
           RM LKKYFQA+VTEEDGM+S+AHRFLSAA+K                             
Sbjct: 241 RMELKKYFQAIVTEEDGMDSIAHRFLSAAMK----------------------------- 300

Query: 301 ECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 360
                  LDRKPSKCVVFED+PRGI AAHNCTMMA+ALIGAHPAYDLVQADLAVASFNEL
Sbjct: 301 -------LDRKPSKCVVFEDEPRGIAAAHNCTMMAVALIGAHPAYDLVQADLAVASFNEL 337

Query: 361 SVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           SVINLRRLFANKGSTFM+LQKQ ++K+P KRKLTIDTIF
Sbjct: 361 SVINLRRLFANKGSTFMDLQKQVIEKSPPKRKLTIDTIF 337

[Close]

BLAST of Carg00178 vs. TrEMBL
Match: tr|M5XCY0|M5XCY0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G261400 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.5e-128
Identity = 257/427 (60.19%), Postives = 287/427 (67.21%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTS-------SSRFKFRNFKRFNFNKHSMVAMSVSESGENGS 60
           MDC+CSNFR+S+  L     S        S+ +F   KR N  KH+ V  S     ENGS
Sbjct: 1   MDCACSNFRSSSLLLLGRSPSLHPHYSFPSKLRFLTLKRLNLAKHARVVRSACGFNENGS 60

Query: 61  LHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNP 120
           ++ F  TPNKLFMQEAIGAEYGEGFE+F PDG +KVDV                      
Sbjct: 61  VNGFSVTPNKLFMQEAIGAEYGEGFETFRPDGPLKVDV---------------------- 120

Query: 121 CGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKR 180
               DFLNDRLQEGFL+RIRYAMKPDEAYGL+FS+DNVVADT+TLKLNSWKQLASEEGK 
Sbjct: 121 ----DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSFDNVVADTRTLKLNSWKQLASEEGKE 180

Query: 181 VPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGLKE 240
           +PED D+Q  MLY GADHVL K                            L  PV+GLKE
Sbjct: 181 IPEDADVQGRMLYAGADHVLHKLLLWDEAEGELDRLALRFSQLYYDNLLRLSKPVEGLKE 240

Query: 241 WLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKV 300
           WLDAVSTA IPCA+VSSLDR +M EAL+RM LKKYFQA+VTEEDGM+S+AHRFLSAA+K 
Sbjct: 241 WLDAVSTARIPCAVVSSLDRINMTEALERMELKKYFQAIVTEEDGMDSIAHRFLSAAMK- 300

Query: 301 TSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCT 360
                                              LDRKPSKCVVFED+PRGI AAHNCT
Sbjct: 301 -----------------------------------LDRKPSKCVVFEDEPRGIAAAHNCT 360

Query: 361 MMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRK 393
           MMA+ALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFM+LQKQ ++K+P KRK
Sbjct: 361 MMAVALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMDLQKQVIEKSPPKRK 365

[Close]

BLAST of Carg00178 vs. TrEMBL
Match: tr|A0A2I4G504|A0A2I4G504_9ROSI (uncharacterized protein LOC109004763 isoform X1 OS=Juglans regia OX=51240 GN=LOC109004763 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 8.7e-127
Identity = 250/428 (58.41%), Postives = 291/428 (67.99%), Query Frame = 0


Query: 1   MDC-SCSNFRTSTAPLSWTPTSS-------SRFKFRNFKRFNFNKHSMVAMSVSESGENG 60
           M C +CSN RTS+  L W P+S        S+ +       N  +H++VA +     EN 
Sbjct: 1   MGCATCSNLRTSSLILPWRPSSQILLSSFPSKLRLPKLGHMNLVRHNLVARNAFGFDEND 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
           S + FP TPNKLFMQEAIGAEYGEGFE+F PDG +KVDV                     
Sbjct: 61  SFNGFPITPNKLFMQEAIGAEYGEGFETFRPDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DFLNDRLQEGFL+RIRYAMKPDEAYGL+FSWDNVVADT+ LKLN+WK+LA EEGK
Sbjct: 121 -----DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSWDNVVADTRALKLNAWKRLAHEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGLK 240
           ++PE+GD+Q+LM+Y GADHVL K                            LK P++GL+
Sbjct: 181 KMPENGDVQRLMVYAGADHVLHKFLLWDESESERERLKLRFSQLYYGNLLELKEPMEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           EWLDAVSTA IPCA+VSSLDR++M+EAL++M LKKYFQA+VTEEDGMES+AHRFLSAAVK
Sbjct: 241 EWLDAVSTASIPCAVVSSLDRRYMVEALEQMGLKKYFQAIVTEEDGMESIAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRG+TAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGVTAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMA+ALIGA+PAY+LVQADLAVA FNELSVINLRRLFANKGSTFM+LQKQ V+K+P KR
Sbjct: 361 TMMAVALIGAYPAYNLVQADLAVAGFNELSVINLRRLFANKGSTFMDLQKQIVEKSPPKR 366

[Close]

BLAST of Carg00178 vs. TrEMBL
Match: tr|A0A2N9J7E7|A0A2N9J7E7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60342 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.5e-126
Identity = 255/428 (59.58%), Postives = 289/428 (67.52%), Query Frame = 0


Query: 1   MDC-SCSNFRTSTAPLSWTPTS-------SSRFKFRNFKRFNFNKHSMVAMSVSESGENG 60
           M C +CSNFR+S+  L W P+S        S+ +    KR N  KH++V  S     ENG
Sbjct: 1   MGCATCSNFRSSSL-LPWRPSSRISHSLCPSKLRLPKLKRLNLVKHNLVVNSACGFDENG 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
           S++ FP TPNKLFMQEAIGAEYGEGFE+F  DG +KVDV                     
Sbjct: 61  SVNGFPNTPNKLFMQEAIGAEYGEGFETFRTDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DFLND+LQEGFL+RIRY MKPDEAYGL+FSWDNVVADT+ LKLN+WKQLA EEGK
Sbjct: 121 -----DFLNDKLQEGFLQRIRYTMKPDEAYGLIFSWDNVVADTRALKLNAWKQLAYEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGLK 240
            +PEDGD+Q+LML+ GADHVL K                            L+ P++GL+
Sbjct: 181 EIPEDGDVQRLMLHAGADHVLHKFLLWDEAESELERLKIRFSQLYYGNLLTLEQPMEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           EWLDAVSTA IPCAIVSSLDR++M+EAL+RM LKKYFQA+VTEEDGMES AHRFLSAAVK
Sbjct: 241 EWLDAVSTARIPCAIVSSLDRRNMVEALERMGLKKYFQAIVTEEDGMESTAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRGITAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGITAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMAIALIGAHPAY+LVQADLAVA FNELSVINLRRLFAN GSTFM+LQKQ V+K+P KR
Sbjct: 361 TMMAIALIGAHPAYNLVQADLAVAGFNELSVINLRRLFANNGSTFMDLQKQIVEKSPPKR 365

The following BLAST results are available for this feature:

BLAST of Carg00178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544709.1	6.7e-171	77.62	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_022941691.1	1.1e-165	75.48	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_022941854.1	2.0e-154	71.43	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_023541024.1	9.7e-154	71.19	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_004146446.1	3.7e-153	69.46	PREDICTED: pseudouridine-5'-phosphatase [Cucumis sativus]	[more]

BLAST of Carg00178 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10970.1	5.2e-117	55.14	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT4G11570.1	1.0e-16	25.74	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

BLAST of Carg00178 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LDD5\|PYRP2_ARATH	1.9e-15	25.74	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabido...	[more]
sp\|Q9X0Y1\|P1254_THEMA	1.1e-04	24.15	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ...	[more]

BLAST of Carg00178 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4E5\|A0A1S3C4E5_CUCME	6.0e-152	69.46	pseudouridine-5'-phosphatase OS=Cucumis melo OX=3656 GN=LOC103496727 PE=4 SV=1	[more]
tr\|A0A251QQ05\|A0A251QQ05_PRUPE	1.1e-132	64.41	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G261400 PE=4 SV=1	[more]
tr\|M5XCY0\|M5XCY0_PRUPE	3.5e-128	60.19	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G261400 PE=4 SV=1	[more]
tr\|A0A2I4G504\|A0A2I4G504_9ROSI	8.7e-127	58.41	uncharacterized protein LOC109004763 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2N9J7E7\|A0A2N9J7E7_FAGSY	1.5e-126	59.58	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60342 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036412	HAD-like_sf
IPR023198	PGP-like_dom2
IPR023214	HAD_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00178-RA	Carg00178-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD superfamily	GENE3D	G3DSA:3.40.50.1000		coord: 198..249 e-value: 9.6E-8 score: 34.3
IPR023214	HAD superfamily	GENE3D	G3DSA:3.40.50.1000		coord: 292..365 e-value: 1.9E-8 score: 35.8
IPR023198	Phosphoglycolate phosphatase-like, domain 2	GENE3D	G3DSA:1.10.150.240		coord: 141..197 e-value: 9.6E-8 score: 34.3
None	No IPR available	PFAM	PF13419	HAD_2	coord: 194..249 e-value: 1.7E-6 score: 28.2
None	No IPR available	PANTHER	PTHR18901:SF29	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 193..266
None	No IPR available	PANTHER	PTHR18901:SF29	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 299..385 coord: 118..196
None	No IPR available	PANTHER	PTHR18901	2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2	coord: 299..385 coord: 118..196 coord: 2..91
None	No IPR available	PANTHER	PTHR18901	2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2	coord: 193..266
None	No IPR available	PANTHER	PTHR18901:SF29	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 2..91
None	No IPR available	CDD	cd07505	HAD_BPGM-like	coord: 143..333 e-value: 1.05185E-23 score: 94.2199
IPR036412	HAD-like superfamily	SUPERFAMILY	SSF56784	HAD-like	coord: 118..353

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00178	Cla007274	Watermelon (97103) v1	carwmB0667
Carg00178	Csa5G218870	Cucumber (Chinese Long) v2	carcuB0694
Carg00178	MELO3C020118	Melon (DHL92) v3.5.1	carmeB0656
Carg00178	ClCG07G004890	Watermelon (Charleston Gray)	carwcgB0651
Carg00178	CSPI05G11380	Wild cucumber (PI 183967)	carcpiB0706
Carg00178	Cucsa.144100	Cucumber (Gy14) v1	carcgyB0745
Carg00178	CmaCh04G001140	Cucurbita maxima (Rimu)	carcmaB0949
Carg00178	CmaCh04G010750	Cucurbita maxima (Rimu)	carcmaB0948
Carg00178	CmoCh04G011410	Cucurbita moschata (Rifu)	carcmoB0923
Carg00178	CmoCh04G001110	Cucurbita moschata (Rifu)	carcmoB0924
Carg00178	Lsi04G010340	Bottle gourd (USVL1VR-Ls)	carlsiB605
Carg00178	Cp4.1LG01g11720	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00178	CsGy5G008640	Cucumber (Gy14) v2	carcgybB0670
Carg00178	MELO3C020118.2	Melon (DHL92) v3.6.1	carmedB0671
Carg00178	CsaV3_5G010790	Cucumber (Chinese Long) v3	carcucB0708
Carg00178	Cla97C07G133290	Watermelon (97103) v2	carwmbB0700
Carg00178	Bhi07G000433	Wax gourd	carwgoB0785

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00178	Carg24483	Silver-seed gourd	carcarB570

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00178	Watermelon (97103) v2	carwmbB0689
Carg00178	Wax gourd	carwgoB0781
Carg00178	Silver-seed gourd	carcarB025
Carg00178	Silver-seed gourd	carcarB197
Carg00178	Silver-seed gourd	carcarB305
Carg00178	Silver-seed gourd	carcarB573
Carg00178	Cucumber (Gy14) v2	carcgybB0673
Carg00178	Cucurbita maxima (Rimu)	carcmaB0940
Carg00178	Cucurbita maxima (Rimu)	carcmaB0943
Carg00178	Cucurbita maxima (Rimu)	carcmaB0950
Carg00178	Cucurbita maxima (Rimu)	carcmaB0952
Carg00178	Cucurbita moschata (Rifu)	carcmoB0914
Carg00178	Cucurbita moschata (Rifu)	carcmoB0918
Carg00178	Cucurbita moschata (Rifu)	carcmoB0925
Carg00178	Cucurbita moschata (Rifu)	carcmoB0927
Carg00178	Cucurbita pepo (Zucchini)	carcpeB0934
Carg00178	Cucurbita pepo (Zucchini)	carcpeB0939
Carg00178	Cucurbita pepo (Zucchini)	carcpeB0944
Carg00178	Cucurbita pepo (Zucchini)	carcpeB0952
Carg00178	Wild cucumber (PI 183967)	carcpiB0709
Carg00178	Cucumber (Chinese Long) v2	carcuB0697
Carg00178	Cucumber (Chinese Long) v3	carcucB0711
Carg00178	Bottle gourd (USVL1VR-Ls)	carlsiB603
Carg00178	Watermelon (Charleston Gray)	carwcgB0644
Carg00178	Watermelon (97103) v1	carwmB0673