Csa5G218850 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGAACTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAGACCTAATACAGTTGACATCTGTCCGAACATTCACTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGTCGATGCTCCTAAAGCATCAATACTAAGTAAAGAGGGGTGAGGTCTACTACCGTAGTTGGTGCCAATATTCTCAACGAAGGTGTAGATCCAAAAGTTATGGCAGACTCGGAGTATTCTATTTGGCTGTGGCATTTGCTTGATAAACATCTACCTCTAAGCGAATTGCGGAGGAGGAATGTCAAAACCCTTCCCTACGCAGATTTCAAATGCTTTGTTAAATTGGATACTCGAGCAAGAATCAAGGAAAACACCTCTACTGAGGCCAAGAATTGA ATGGGTTTGAACTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAGACCTAATACAGTTGACATCTGTCCGAACATTCACTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGTCGATGCTCCTAAAGCATCAATACTAATTGGTGCCAATATTCTCAACGAAGGTGTAGATCCAAAAGTTATGGCAGACTCGGAGTATTCTATTTGGCTGTGGCATTTGCTTGATAAACATCTACCTCTAAGCGAATTGCGGAGGAGGAATGTCAAAACCCTTCCCTACGCAGATTTCAAATGCTTTGTTAAATTGGATACTCGAGCAAGAATCAAGGAAAACACCTCTACTGAGGCCAAGAATTGA ATGGGTTTGAACTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAGACCTAATACAGTTGACATCTGTCCGAACATTCACTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGTCGATGCTCCTAAAGCATCAATACTAATTGGTGCCAATATTCTCAACGAAGGTGTAGATCCAAAAGTTATGGCAGACTCGGAGTATTCTATTTGGCTGTGGCATTTGCTTGATAAACATCTACCTCTAAGCGAATTGCGGAGGAGGAATGTCAAAACCCTTCCCTACGCAGATTTCAAATGCTTTGTTAAATTGGATACTCGAGCAAGAATCAAGGAAAACACCTCTACTGAGGCCAAGAATTGA MGLNLNQISLFRRSIIVNSKDLIQLTSVRTFTAGGKSKKGSKGGAAVDAPKASILIGANILNEGVDPKVMADSEYSIWLWHLLDKHLPLSELRRRNVKTLPYADFKCFVKLDTRARIKENTSTEAKN*
BLAST of Csa5G218850 vs. TrEMBL
Match: A0A0A0KP92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218850 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 2.4e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa5G218850 vs. TrEMBL
Match: A0A0A0KYS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539610 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 4.8e-44 Identity = 93/131 (70.99%), Postives = 109/131 (83.21%), Query Frame = 1
BLAST of Csa5G218850 vs. TrEMBL
Match: A0A0B2RJC8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_044758 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31 Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 1
BLAST of Csa5G218850 vs. TrEMBL
Match: C6SYP3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G077100 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31 Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 1
BLAST of Csa5G218850 vs. TrEMBL
Match: F6I5L7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00420 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31 Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 1
BLAST of Csa5G218850 vs. TAIR10
Match: AT3G01740.1 (AT3G01740.1 Mitochondrial ribosomal protein L37) HSP 1 Score: 132.5 bits (332), Expect = 1.9e-31 Identity = 74/133 (55.64%), Postives = 88/133 (66.17%), Query Frame = 1
BLAST of Csa5G218850 vs. TAIR10
Match: AT5G14290.1 (AT5G14290.1 Mitochondrial ribosomal protein L37) HSP 1 Score: 120.2 bits (300), Expect = 9.5e-28 Identity = 68/133 (51.13%), Postives = 88/133 (66.17%), Query Frame = 1
BLAST of Csa5G218850 vs. NCBI nr
Match: gi|700195542|gb|KGN50719.1| (hypothetical protein Csa_5G218850 [Cucumis sativus]) HSP 1 Score: 252.7 bits (644), Expect = 3.5e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa5G218850 vs. NCBI nr
Match: gi|659083110|ref|XP_008442187.1| (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 2.8e-45 Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 1
BLAST of Csa5G218850 vs. NCBI nr
Match: gi|659083108|ref|XP_008442186.1| (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 2.8e-45 Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 1
BLAST of Csa5G218850 vs. NCBI nr
Match: gi|778695065|ref|XP_004144674.2| (PREDICTED: 39S ribosomal protein L54, mitochondrial-like [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 6.8e-44 Identity = 93/131 (70.99%), Postives = 109/131 (83.21%), Query Frame = 1
BLAST of Csa5G218850 vs. NCBI nr
Match: gi|659114140|ref|XP_008456923.1| (PREDICTED: uncharacterized protein LOC103496726 [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34 Identity = 88/136 (64.71%), Postives = 100/136 (73.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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