Csa5G173460 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G173460
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase-like protein; contains IPR021099 (Plant organelle RNA recognition domain)
LocationChr5 : 7117973 .. 7119259 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAACCCGTAAAGTGCTCAAGTTTCAGGAACTTATTCTCTCCCAATTCAACCAGACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTAGACTGAGGAAACTCTTGATGATGTCGAACAATGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTACCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTCTTTAGACTCTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCCAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCGTTGTGAATTTTCCCCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGTATCTGCCCAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGGAAACTTCACACTGTTTTCCTCAGGGAAGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGACAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAACAGTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAATTCTAGGACAGATTATGTGGAGGATAAATCTGTTGATTTTGGCGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCTGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGGATGTGGACATAACAGAATAA

mRNA sequence

ATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAACCCGTAAAGTGCTCAAGTTTCAGGAACTTATTCTCTCCCAATTCAACCAGACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTAGACTGAGGAAACTCTTGATGATGTCGAACAATGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTACCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTCTTTAGACTCTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCCAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCGTTGTGAATTTTCCCCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGTATCTGCCCAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGGAAACTTCACACTGTTTTCCTCAGGGAAGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGACAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAACAGTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAATTCTAGGACAGATTATGTGGAGGATAAATCTGTTGATTTTGGCGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCTGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGGATGTGGACATAACAGAATAA

Coding sequence (CDS)

ATGTCTCAATCCACCTCCATTCCCAAAAACCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAGAAAACCCGTAAAGTGCTCAAGTTTCAGGAACTTATTCTCTCCCAATTCAACCAGACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCGAGCTGTCATTGCCCAGATTCCGGATGCTGTCACTAGACTGAGGAAACTCTTGATGATGTCGAACAATGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTACCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTCTTTAGACTCTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATAGAGAGAGCCAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCGTTGTGAATTTTCCCCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATATGAGGACATTTCTGAGTATGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGTATCTGCCCAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACAAGAGGAAACCATGGGAAACTTCACACTGTTTTCCTCAGGGAAGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGACAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAACAGTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAATTCTAGGACAGATTATGTGGAGGATAAATCTGTTGATTTTGGCGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATCTGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGGATGTGGACATAACAGAATAA

Protein sequence

MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDRELVGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE*
Homology
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BLAST of Csa5G173460 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 4.2e-170
Identity = 296/365 (81.10%), Postives = 324/365 (88.77%), Query Frame = 1 

Query: 2   SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG- 61
           SQST+IPK   RVRDHGYDNYMEVEKK RKV+KF  LILSQ N TI +S LD LARRLG 
Sbjct: 35  SQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGL 94

Query: 62  -FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLR 121
            FKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  +  AV+ QIPDAVTRLR
Sbjct: 95  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLR 154

Query: 122 KLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERD 181
           KL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+KYIEIVE+D
Sbjct: 155 KLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKD 214

Query: 182 PSLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPY 241
           P+L++CAIER RE  YR KG DAED+RFSFVVNFPPGFKIGKYFRIA+WKWQRLPYWSPY
Sbjct: 215 PNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPY 274

Query: 242 EDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLL 301
           EDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHFR  M LPKKLK+FLL
Sbjct: 275 EDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLL 334

Query: 302 QHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDRE 361
           QHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LAELVL+SPRKA VD E
Sbjct: 335 QHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAE 394

Query: 362 LVGYR 365
           LV YR
Sbjct: 395 LVRYR 399

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BLAST of Csa5G173460 vs. TrEMBL
Match: A0A0A0KLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173460 PE=4 SV=1)

HSP 1 Score: 854.7 bits (2207), Expect = 4.7e-245
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
           SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
           VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 421 VEDVDITE 429
           VEDVDITE
Sbjct: 421 VEDVDITE 428

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BLAST of Csa5G173460 vs. TrEMBL
Match: A0A067JQN8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26141 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 1.5e-190
Identity = 333/427 (77.99%), Postives = 376/427 (88.06%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPK   RVRDHGYDNYME+EKKTRKVLKFQ LILSQFNQTI +SRLD LARRLG
Sbjct: 1   MSQSTSIPKKQLRVRDHGYDNYMEIEKKTRKVLKFQSLILSQFNQTIQISRLDALARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQ++AGAFVLKFPH+FE+YEHPVQRILYCRLTRKA LQI+Q+K A+IAQIPD+VTRLRK
Sbjct: 61  FKQYQAGAFVLKFPHIFEVYEHPVQRILYCRLTRKALLQIQQEKEALIAQIPDSVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           L+MMS+ GRLRLEH+RIARSEFGLPDDFEYSVVLK+PQ+FRL DA +TRNKYIEIV+RDP
Sbjct: 121 LIMMSSTGRLRLEHVRIARSEFGLPDDFEYSVVLKNPQYFRLIDAIDTRNKYIEIVDRDP 180

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
            LTVCAIE+ARER YREKG  AEDIRFSF++NFPPGFKIGKY+RIA+WKWQR PYWSPYE
Sbjct: 181 MLTVCAIEKARERKYREKGMAAEDIRFSFIINFPPGFKIGKYYRIAVWKWQRTPYWSPYE 240

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DIS YD+RSIEAQKRMEKRAVA IHE++SLTVEKKITLERIAHFR+AM+LPKKLK+FLLQ
Sbjct: 241 DISGYDLRSIEAQKRMEKRAVAAIHELVSLTVEKKITLERIAHFRMAMHLPKKLKEFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFY+STRGNHGKLHTVFLRE YRR ELVEPND+YLARR+L ELVL SPRKA +DREL
Sbjct: 301 HQGIFYVSTRGNHGKLHTVFLREAYRRGELVEPNDLYLARRKLGELVLFSPRKAKMDREL 360

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSD--DDNHS 420
           V YRR+R   +ME    D VE+      V   G   D L+SD+GSDV SDF+D  DDN +
Sbjct: 361 VSYRRDRRDEEMERFGRDCVENNFEAGKVGQDGEFEDDLNSDLGSDVGSDFTDESDDNGA 420

Query: 421 VEVEDVD 426
           V++ + +
Sbjct: 421 VDIVNAE 427

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BLAST of Csa5G173460 vs. TrEMBL
Match: A0A061G0P5_THECC (Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_015115 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 1.9e-190
Identity = 335/429 (78.09%), Postives = 374/429 (87.18%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPK  QRVRDHGYDNYMEVEKKTRKVLKFQ LILSQ NQT+P+SR D LARRLG
Sbjct: 37  MSQSTSIPKKQQRVRDHGYDNYMEVEKKTRKVLKFQSLILSQPNQTLPISRFDSLARRLG 96

Query: 61  --FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRL 120
             FKQ+EAGA++LKFPHVFEIYEHPVQRILYCRLTRKA LQI+++K A+ AQIPDAVTRL
Sbjct: 97  LGFKQNEAGAYLLKFPHVFEIYEHPVQRILYCRLTRKALLQIDRKKEALNAQIPDAVTRL 156

Query: 121 RKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 180
           RKLLMMSN GRLRLEH+RIAR EFGLPDDFEYSV+L HPQFFRLFDA ETRNKYIEIVER
Sbjct: 157 RKLLMMSNTGRLRLEHVRIARKEFGLPDDFEYSVILNHPQFFRLFDATETRNKYIEIVER 216

Query: 181 DPSLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSP 240
           DP L VCAI   RER YREKG DAEDIRFSF+VNFPPGFKIGKY+RIA+WKWQR+PYWSP
Sbjct: 217 DPKLAVCAIGTVREREYREKGFDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRVPYWSP 276

Query: 241 YEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFL 300
           YED+S YD+RSIEAQKRMEKRAVATIHE+LSLTVEKKITLERIAHFR+AM LPKKLKDFL
Sbjct: 277 YEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFL 336

Query: 301 LQHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDR 360
           LQHQGIFY+STRGN+GKLHTVFLRE YR+ EL+EPND+YLARR+L ELVL+SPRKA VD+
Sbjct: 337 LQHQGIFYVSTRGNYGKLHTVFLREAYRKGELIEPNDLYLARRKLGELVLISPRKAKVDK 396

Query: 361 ELVGYRRERVGYDMENSRTDYVEDKSVDFGVENK----GNVRDVLDSDIGSDVESDFSDD 420
           ELV ++R+R G ++E  R DYVE+   DFGVE K    G  +D  DSD+ SD+E  ++D+
Sbjct: 397 ELVSFKRDREGDEVERVRRDYVENDFEDFGVEGKVGQDGEGKDGSDSDLVSDIECHYTDE 456

Query: 421 DNHSVEVED 424
           D    E  D
Sbjct: 457 DEDFDETMD 465

[Close]
BLAST of Csa5G173460 vs. TrEMBL
Match: F6HP54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00680 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 8.1e-189
Identity = 333/430 (77.44%), Postives = 371/430 (86.28%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPK LQRVRDHGYDNYMEVEKK RK+LKFQ+L L Q +QT+PVSRLD LARRL 
Sbjct: 28  MSQSTSIPKKLQRVRDHGYDNYMEVEKKLRKILKFQDLFLCQPHQTLPVSRLDTLARRLD 87

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQHEAGAF+LKFPHVFEIYEHPV+RILYCRLTRKAHLQIEQ+ RA+  QIPDAVTRLRK
Sbjct: 88  FKQHEAGAFILKFPHVFEIYEHPVRRILYCRLTRKAHLQIEQENRALNDQIPDAVTRLRK 147

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSN GRLRLEHIRIAR E GLPDDFEYSV+LK+PQFFRLFDAKETRNKYIEIVE DP
Sbjct: 148 LLMMSNTGRLRLEHIRIARRELGLPDDFEYSVILKNPQFFRLFDAKETRNKYIEIVESDP 207

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
           +L VCAIE+ RE+ YREKG DAEDIRFSF+VNFPPGFKIGKY+RIA+WKWQR+PYWSPYE
Sbjct: 208 TLAVCAIEKLREKEYREKGIDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRIPYWSPYE 267

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           D+S YD+RS+EAQKRMEKRA+ATIHE+LSLTVEKKI+LERIAHFR AM LPKKLK+FLLQ
Sbjct: 268 DVSGYDLRSLEAQKRMEKRAIATIHELLSLTVEKKISLERIAHFRQAMNLPKKLKEFLLQ 327

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFYISTRGN GKLHTVFLRE Y++ EL+EPND+YLARR+LAELVLLSPRKA VDREL
Sbjct: 328 HQGIFYISTRGNFGKLHTVFLREAYKKGELIEPNDLYLARRKLAELVLLSPRKANVDREL 387

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENK----GNVRDVLDSDIGSDVESDFSDDDN 420
           V YRR+R   +M   ++DYVE +   F  EN     G      D ++ SD  SDFSD+DN
Sbjct: 388 VNYRRDREDDEMVRIQSDYVESRFEGFVDENNFRQDGERGRDSDLNLDSDAGSDFSDEDN 447

Query: 421 HSVEVEDVDI 427
              E  D +I
Sbjct: 448 KCEETVDAEI 457

[Close]
BLAST of Csa5G173460 vs. TrEMBL
Match: A0A058ZX72_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00235 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 5.8e-187
Identity = 324/424 (76.42%), Postives = 371/424 (87.50%), Query Frame = 1 

Query: 2   SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLGF 61
           SQSTSIPKNL+RVRDHGYDNYMEVEKKTRKVLKFQ+LILSQ NQT+P+SRLD+LARR GF
Sbjct: 40  SQSTSIPKNLKRVRDHGYDNYMEVEKKTRKVLKFQDLILSQRNQTVPISRLDVLARRFGF 99

Query: 62  KQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKL 121
           KQHEAGAF+LKFPHVFE+YEHPVQRILYCRLTRKA LQI+Q+K A+ AQIPDAV RLRKL
Sbjct: 100 KQHEAGAFLLKFPHVFEVYEHPVQRILYCRLTRKALLQIQQEKEALDAQIPDAVVRLRKL 159

Query: 122 LMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPS 181
           L+MSN GRLRLEH+RIARS FGLP+DFEYSV+LK+P+FFRLFDAK TRNKYIEIVERDPS
Sbjct: 160 LLMSNTGRLRLEHVRIARSAFGLPEDFEYSVILKYPEFFRLFDAKATRNKYIEIVERDPS 219

Query: 182 LTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYED 241
           LTVCAIE ARER YREKG DAED+RFSF++NFPPGFKIGKY+RIA+WKWQR+PYWSPYED
Sbjct: 220 LTVCAIEMAREREYREKGIDAEDVRFSFIINFPPGFKIGKYYRIAVWKWQRVPYWSPYED 279

Query: 242 ISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQH 301
           +S YD+RS+EAQKRMEKRAVA IHE+LSLT+EKKITLERIAHFR+AM LPKKLKDFLLQH
Sbjct: 280 VSRYDLRSLEAQKRMEKRAVAVIHELLSLTIEKKITLERIAHFRMAMNLPKKLKDFLLQH 339

Query: 302 QGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDRELV 361
           QGIFYISTRGNHGKLHTVFLRE Y++ EL+EPND+YLARR+LA+LVL SPRKA VD+ELV
Sbjct: 340 QGIFYISTRGNHGKLHTVFLREAYKKGELIEPNDLYLARRKLADLVLSSPRKANVDKELV 399

Query: 362 GYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDV--ESDFSDDDNHSV 421
            Y R+    +M   R D++E+K + F V+    +    D    SD   E+DF+DD +   
Sbjct: 400 SYGRDDHD-EMRRFRRDHIENKMMKFDVQENFVLDAEGDEQPDSDAASEADFTDDSDDGE 459

Query: 422 EVED 424
            + D
Sbjct: 460 AIND 462

[Close]
BLAST of Csa5G173460 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 599.0 bits (1543), Expect = 2.3e-171
Identity = 296/365 (81.10%), Postives = 324/365 (88.77%), Query Frame = 1 

Query: 2   SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG- 61
           SQST+IPK   RVRDHGYDNYMEVEKK RKV+KF  LILSQ N TI +S LD LARRLG 
Sbjct: 35  SQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGL 94

Query: 62  -FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLR 121
            FKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  +  AV+ QIPDAVTRLR
Sbjct: 95  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLR 154

Query: 122 KLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERD 181
           KL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D +ETR+KYIEIVE+D
Sbjct: 155 KLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKD 214

Query: 182 PSLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPY 241
           P+L++CAIER RE  YR KG DAED+RFSFVVNFPPGFKIGKYFRIA+WKWQRLPYWSPY
Sbjct: 215 PNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPY 274

Query: 242 EDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLL 301
           EDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHFR  M LPKKLK+FLL
Sbjct: 275 EDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLL 334

Query: 302 QHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDRE 361
           QHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LAELVL+SPRKA VD E
Sbjct: 335 QHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAE 394

Query: 362 LVGYR 365
           LV YR
Sbjct: 395 LVRYR 399

[Close]
BLAST of Csa5G173460 vs. TAIR10
Match: AT5G45790.2 (AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-62
Identity = 145/382 (37.96%), Postives = 222/382 (58.12%), Query Frame = 1 

Query: 13  RVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILAR--RLGFKQHEAGAFV 72
           R RDH  D  +   +K   +L+  +L+ S+  +  P   L +++R   L       GAF+
Sbjct: 68  RTRDHQLDKIIPQIRKLNIILEISKLMSSK--KRGPFVSLQLMSRWKNLVGLNVNVGAFI 127

Query: 73  LKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRL 132
            K+PH FEI+ HP  + L C++T K  + I++++  V     DAV R++KLL++S +G L
Sbjct: 128 GKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVL 187

Query: 133 RLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER-DPSLTVCAIER 192
           R+  +R+ R E GLP+DF  S++ K+   FRL D +      +E+V+R D SL V  +E 
Sbjct: 188 RVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVAKVEE 247

Query: 193 ARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE--DISEYDM 252
            RE  YREK     +  ++F ++ P GFKI K FR  +  WQR+PY  PY+  +IS    
Sbjct: 248 WREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEIS---- 307

Query: 253 RSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYI 312
           R +E   R EKR VA IHE+LSLTVEK + +ER+AHFR  + +   +++ +L+H GIFY+
Sbjct: 308 RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYV 367

Query: 313 STRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPR--KATVDRELVGYRR 372
           ST+G+     T+FLRE Y +  L+EPN +Y  RR++ +LVLL  R  +  + RE   +R 
Sbjct: 368 STKGSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDETHRE 427

Query: 373 ERVGYDMENSRTDYVEDKSVDF 388
           E+    + +S  D+   +  D+
Sbjct: 428 EKSRDVLISSNEDWEGGRDGDW 432

[Close]
BLAST of Csa5G173460 vs. TAIR10
Match: AT1G06440.1 (AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 222.2 bits (565), Expect = 6.0e-58
Identity = 138/360 (38.33%), Postives = 198/360 (55.00%), Query Frame = 1 

Query: 2   SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLGF 61
           S +TS      R RD  ++  M+  K   KV+  Q+L L+      P   ++ L+R L  
Sbjct: 23  STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSR-LSQ 82

Query: 62  KQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRL 121
           K H    A +F+ K+PH+F +   PV+   +CRLT  A     Q+  A+ A +   V RL
Sbjct: 83  KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 142

Query: 122 RKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 181
            +LL MS +  + L  +     E GLPDDFE SV+ K+P  F+L D  E+    +E+V+ 
Sbjct: 143 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 202

Query: 182 DPSLT--VCAIERAR--ERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLP 241
           +        A+E+ R  E    +   D  +I+FSF  ++PPG ++ K F+  + +WQRLP
Sbjct: 203 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 262

Query: 242 YWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKL 301
           Y  PYED+     +S      +EKRAVA  HE L+LTVEK + +E+I+HFR    +   +
Sbjct: 263 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 322

Query: 302 KDFLLQHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKA 355
           +D  L H G+FY+ST+   GK HTVFLRE Y R  L++PN VY ARR+L +LVLL    A
Sbjct: 323 RDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAA 377

[Close]
BLAST of Csa5G173460 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 158.7 bits (400), Expect = 8.1e-39
Identity = 120/417 (28.78%), Postives = 215/417 (51.56%), Query Frame = 1 

Query: 11  LQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAG-AF 70
           ++R ++  +D+ ++ +KK + VL  +++++SQ ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 71  VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDA-VTRLRKLLMMSNNG 130
           + K+P VFEI E     + +   +    L +++ +  +  ++ D  V +LRKL+MMS + 
Sbjct: 136 LRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMR--IRNELEDVLVVKLRKLVMMSIDK 195

Query: 131 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 190
           R+ LE I   +++ GLP +F  ++  ++PQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP--RGPALELTHWDPELAVSAAE 255

Query: 191 ------RARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 250
                 R RE   R    D    +F+ V   P G  + K     + +++ + Y SPY+D 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFNRV-KLPRGLNLSKSETRKISQFRDMQYISPYKDF 315

Query: 251 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQ 310
           S     ++E     EK A   IHE+LSLT EK+  ++ + HFR      ++L+  L++H 
Sbjct: 316 SHLRSGTLEK----EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375

Query: 311 GIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLS--PRKATVDREL 370
            +FY+S +G      +VFLRE YR SEL++ + + L + ++  LV +   PR+       
Sbjct: 376 DLFYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRG------ 435

Query: 371 VGYRRERVGYDMENSRTDY-VEDKSVDFGVENKGNVRDVLD-SDIGSDVESDFSDDD 416
            G R++  G ++E   +D   E++  +   E   +V   L+  D G+D + D++DD+
Sbjct: 436 -GPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDE 472

[Close]
BLAST of Csa5G173460 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-37
Identity = 112/409 (27.38%), Postives = 194/409 (47.43%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           M+ S  +    +  R    +   E  K   KV+   E++  + +  + V   +   R++ 
Sbjct: 43  MTSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQIN 102

Query: 61  F-KQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLR 120
             K H+   F+ K P +FE+Y+   + +L+C LT      +++  + +      A   + 
Sbjct: 103 LPKPHKISDFIRKSPKLFELYKDQ-RGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVT 162

Query: 121 KLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERD 180
           + LMMS + +L L+ I   R +FGLP DF  + V   PQ F++    +   +Y+E+V  +
Sbjct: 163 RCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGE-EYLELVSWN 222

Query: 181 PSLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPY 240
           P+  +  +E+    +  +       +  +F + FPP +K    +R  +  +Q+  Y SPY
Sbjct: 223 PAWAITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPY 282

Query: 241 EDISEYDMRSIEA-QKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFL 300
            D      R +EA  K  +KRA+A +HE+LS T+EK++  + + HFR    +P+KL    
Sbjct: 283 ADA-----RGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIF 342

Query: 301 LQHQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDR 360
           L+H GIFY+S R   GK  +VFL EGY   EL+E   + L + +L +      RK    R
Sbjct: 343 LKHCGIFYVSER---GKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRK----R 402

Query: 361 ELVGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDV 408
           ++  Y  + +  +          D+ +  G E  G+  DV+  D   D+
Sbjct: 403 DIQTY-SDTLDMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDI 436

[Close]
BLAST of Csa5G173460 vs. NCBI nr
Match: gi|700195241|gb|KGN50418.1| (hypothetical protein Csa_5G173460 [Cucumis sativus])

HSP 1 Score: 854.7 bits (2207), Expect = 6.7e-245
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
           SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
           VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 421 VEDVDITE 429
           VEDVDITE
Sbjct: 421 VEDVDITE 428

[Close]
BLAST of Csa5G173460 vs. NCBI nr
Match: gi|778700633|ref|XP_004143708.2| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 854.7 bits (2207), Expect = 6.7e-245
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG
Sbjct: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
           SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 215 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ
Sbjct: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 394

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
           VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 395 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454

Query: 421 VEDVDITE 429
           VEDVDITE
Sbjct: 455 VEDVDITE 462

[Close]
BLAST of Csa5G173460 vs. NCBI nr
Match: gi|659073038|ref|XP_008467225.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 831.2 bits (2146), Expect = 8.0e-238
Identity = 415/428 (96.96%), Postives = 420/428 (98.13%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQ+LILSQFNQTIPVSRLDILARRLG
Sbjct: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
           SLTVCAIERARERVYRE+GSDAEDIRFSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAM LPKKLKDFLLQ
Sbjct: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFYISTRGNHGKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA +DREL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420
           VGYRRERVGYDMEN RTDYVEDKS DFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE
Sbjct: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 454

Query: 421 VEDVDITE 429
           VEDVDITE
Sbjct: 455 VEDVDITE 462

[Close]
BLAST of Csa5G173460 vs. NCBI nr
Match: gi|643706178|gb|KDP22310.1| (hypothetical protein JCGZ_26141 [Jatropha curcas])

HSP 1 Score: 673.7 bits (1737), Expect = 2.1e-190
Identity = 333/427 (77.99%), Postives = 376/427 (88.06%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPK   RVRDHGYDNYME+EKKTRKVLKFQ LILSQFNQTI +SRLD LARRLG
Sbjct: 1   MSQSTSIPKKQLRVRDHGYDNYMEIEKKTRKVLKFQSLILSQFNQTIQISRLDALARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQ++AGAFVLKFPH+FE+YEHPVQRILYCRLTRKA LQI+Q+K A+IAQIPD+VTRLRK
Sbjct: 61  FKQYQAGAFVLKFPHIFEVYEHPVQRILYCRLTRKALLQIQQEKEALIAQIPDSVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           L+MMS+ GRLRLEH+RIARSEFGLPDDFEYSVVLK+PQ+FRL DA +TRNKYIEIV+RDP
Sbjct: 121 LIMMSSTGRLRLEHVRIARSEFGLPDDFEYSVVLKNPQYFRLIDAIDTRNKYIEIVDRDP 180

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
            LTVCAIE+ARER YREKG  AEDIRFSF++NFPPGFKIGKY+RIA+WKWQR PYWSPYE
Sbjct: 181 MLTVCAIEKARERKYREKGMAAEDIRFSFIINFPPGFKIGKYYRIAVWKWQRTPYWSPYE 240

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DIS YD+RSIEAQKRMEKRAVA IHE++SLTVEKKITLERIAHFR+AM+LPKKLK+FLLQ
Sbjct: 241 DISGYDLRSIEAQKRMEKRAVAAIHELVSLTVEKKITLERIAHFRMAMHLPKKLKEFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFY+STRGNHGKLHTVFLRE YRR ELVEPND+YLARR+L ELVL SPRKA +DREL
Sbjct: 301 HQGIFYVSTRGNHGKLHTVFLREAYRRGELVEPNDLYLARRKLGELVLFSPRKAKMDREL 360

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSD--DDNHS 420
           V YRR+R   +ME    D VE+      V   G   D L+SD+GSDV SDF+D  DDN +
Sbjct: 361 VSYRRDRRDEEMERFGRDCVENNFEAGKVGQDGEFEDDLNSDLGSDVGSDFTDESDDNGA 420

Query: 421 VEVEDVD 426
           V++ + +
Sbjct: 421 VDIVNAE 427

[Close]
BLAST of Csa5G173460 vs. NCBI nr
Match: gi|802769202|ref|XP_012090291.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas])

HSP 1 Score: 673.7 bits (1737), Expect = 2.1e-190
Identity = 333/427 (77.99%), Postives = 376/427 (88.06%), Query Frame = 1 

Query: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60
           MSQSTSIPK   RVRDHGYDNYME+EKKTRKVLKFQ LILSQFNQTI +SRLD LARRLG
Sbjct: 32  MSQSTSIPKKQLRVRDHGYDNYMEIEKKTRKVLKFQSLILSQFNQTIQISRLDALARRLG 91

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120
           FKQ++AGAFVLKFPH+FE+YEHPVQRILYCRLTRKA LQI+Q+K A+IAQIPD+VTRLRK
Sbjct: 92  FKQYQAGAFVLKFPHIFEVYEHPVQRILYCRLTRKALLQIQQEKEALIAQIPDSVTRLRK 151

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180
           L+MMS+ GRLRLEH+RIARSEFGLPDDFEYSVVLK+PQ+FRL DA +TRNKYIEIV+RDP
Sbjct: 152 LIMMSSTGRLRLEHVRIARSEFGLPDDFEYSVVLKNPQYFRLIDAIDTRNKYIEIVDRDP 211

Query: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240
            LTVCAIE+ARER YREKG  AEDIRFSF++NFPPGFKIGKY+RIA+WKWQR PYWSPYE
Sbjct: 212 MLTVCAIEKARERKYREKGMAAEDIRFSFIINFPPGFKIGKYYRIAVWKWQRTPYWSPYE 271

Query: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300
           DIS YD+RSIEAQKRMEKRAVA IHE++SLTVEKKITLERIAHFR+AM+LPKKLK+FLLQ
Sbjct: 272 DISGYDLRSIEAQKRMEKRAVAAIHELVSLTVEKKITLERIAHFRMAMHLPKKLKEFLLQ 331

Query: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360
           HQGIFY+STRGNHGKLHTVFLRE YRR ELVEPND+YLARR+L ELVL SPRKA +DREL
Sbjct: 332 HQGIFYVSTRGNHGKLHTVFLREAYRRGELVEPNDLYLARRKLGELVLFSPRKAKMDREL 391

Query: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSD--DDNHS 420
           V YRR+R   +ME    D VE+      V   G   D L+SD+GSDV SDF+D  DDN +
Sbjct: 392 VSYRRDRRDEEMERFGRDCVENNFEAGKVGQDGEFEDDLNSDLGSDVGSDFTDESDDNGA 451

Query: 421 VEVEDVD 426
           V++ + +
Sbjct: 452 VDIVNAE 458

The following BLAST results are available for this feature:
BLAST of Csa5G173460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH4.2e-17081.10Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Csa5G173460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLD1_CUCSA4.7e-245100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173460 PE=4 SV=1[more]
A0A067JQN8_JATCU1.5e-19077.99Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26141 PE=4 SV=1[more]
A0A061G0P5_THECC1.9e-19078.09Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_0... [more]
F6HP54_VITVI8.1e-18977.44Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g00680 PE=4 SV=... [more]
A0A058ZX72_EUCGR5.8e-18776.42Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00235 PE=4 SV=1[more]
BLAST of Csa5G173460 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33495.12.3e-17181.10 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G45790.21.4e-6237.96 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT1G06440.16.0e-5838.33 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G01037.18.1e-3928.78 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G21970.12.0e-3727.38 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of Csa5G173460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195241|gb|KGN50418.1|6.7e-245100.00hypothetical protein Csa_5G173460 [Cucumis sativus][more]
gi|778700633|ref|XP_004143708.2|6.7e-245100.00PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659073038|ref|XP_008467225.1|8.0e-23896.96PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|643706178|gb|KDP22310.1|2.1e-19077.99hypothetical protein JCGZ_26141 [Jatropha curcas][more]
gi|802769202|ref|XP_012090291.1|2.1e-19077.99PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010102 lateral root morphogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0008285 negative regulation of cell proliferation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU127613cucumber EST collection version 3.0transcribed_cluster
CU145821cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G173460.1Csa5G173460.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU145821CU145821transcribed_cluster
CU127613CU127613transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 14..350
score: 3.0E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 1..428
score: 7.2E
NoneNo IPR availablePANTHERPTHR31476:SF9PROTEIN ROOT PRIMORDIUM DEFECTIVE 1coord: 1..428
score: 7.2E