Carg20771 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20771
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	Cucurbita_argyrosperma_scaffold_134 : 246864 .. 248150 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAATCCACCTCCATTCCCAGAAAGCTCGAAAGGGTTCGTGACCATGGCTACGATAATTACATGGATGTGGAGAAGAAAACCCGAAAAGTGCTCAAGTTTCAGGACCTTATTCTCACCCAAATTAACCAAACCATCCCAGTTTCTCGCCTTGATGTCTCAGCTCGTCGCCTTGGCTTCAAACAGCACGAAGCTGGGGCGTTCGTCCTCAAATTCCCTCATGTGTTTGAAATCTATGAGCACCCTGTTCAACGAATCCTCTATTGCAGGTTAACTCGAAAAGCCCATCTCCAAATCGAGCAGGAAAAGCAGGCTGTCATTGCGCAGATTCCGGATGCTGTGACTCGGCTGAGGAAGCTTTTGATGATGTCCAACAATGGCCGTCTTCGCCTCGAGCACATCCGAATCGCCCGGTCTGAGTTTGGGTTGCCTGACGATTTCGAGTATTCGGTAGTTCTCAAATACCCTCAATTCTTTAGACTGTTTGATGCAAAGGAAACCAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAATCTTACTGTTTGTGCAATAGAGAAAGCTAGGGAGAGAGTTTATAGAGAAAAAGGGAGTGATGCTGAGGATATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGATTCAAGATAGGGAAGTATTATAGAATTGCTGTGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCGTACGAGGACGTTTCTGAGTACGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTGTTTGACTGTAGAGAAGAAGATCAGTTTGGAACGGATTGCACATTTTCGATTGGCGATGGACCTGCCGAAGAAGTTGAAGGATTTCCTTCTTCAGCATCAGGGGATTTTCTACATTTCAACCAGAGGTAACCATGGGAAGCTTCACACTATTTTCCTCAGGGAGGCTTACAGGAGAGGTGAGTTAATAGAGCCAAATGATGTGTATTTGGCTAGAAGAACACTGGCTGAGTTGGTTTTACTCAGTCCAAGGAAGGCAAAACTTAACAGAGAACTAGTTGGGTACAGGAGAGAAAGAGTGGGCTATGATATGGAAAGCTTTAGGCCAGATAAATTAGATGATTATGGTGCTGGGGACAGAGGCAATGTGAGAGACGTTTTGGACTCGGACGTGGGTTCTGATTCAGAGTCCGATCTCTCCGATGATAGTAATCGTAGTGTTGGTGAAACGTTCGAGGAAGAGGATGTGAACATAACCAAATAA

mRNA sequence

ATGTCTCAATCCACCTCCATTCCCAGAAAGCTCGAAAGGGTTCGTGACCATGGCTACGATAATTACATGGATGTGGAGAAGAAAACCCGAAAAGTGCTCAAGTTTCAGGACCTTATTCTCACCCAAATTAACCAAACCATCCCAGTTTCTCGCCTTGATGTCTCAGCTCGTCGCCTTGGCTTCAAACAGCACGAAGCTGGGGCGTTCGTCCTCAAATTCCCTCATGTGTTTGAAATCTATGAGCACCCTGTTCAACGAATCCTCTATTGCAGGTTAACTCGAAAAGCCCATCTCCAAATCGAGCAGGAAAAGCAGGCTGTCATTGCGCAGATTCCGGATGCTGTGACTCGGCTGAGGAAGCTTTTGATGATGTCCAACAATGGCCGTCTTCGCCTCGAGCACATCCGAATCGCCCGGTCTGAGTTTGGGTTGCCTGACGATTTCGAGTATTCGGTAGTTCTCAAATACCCTCAATTCTTTAGACTGTTTGATGCAAAGGAAACCAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAATCTTACTGTTTGTGCAATAGAGAAAGCTAGGGAGAGAGTTTATAGAGAAAAAGGGAGTGATGCTGAGGATATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGATTCAAGATAGGGAAGTATTATAGAATTGCTGTGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCGTACGAGGACGTTTCTGAGTACGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTGTTTGACTGTAGAGAAGAAGATCAGTTTGGAACGGATTGCACATTTTCGATTGGCGATGGACCTGCCGAAGAAGTTGAAGGATTTCCTTCTTCAGCATCAGGGGATTTTCTACATTTCAACCAGAGGTAACCATGGGAAGCTTCACACTATTTTCCTCAGGGAGGCTTACAGGAGAGGTGAGTTAATAGAGCCAAATGATGTGTATTTGGCTAGAAGAACACTGGCTGAGTTGGTTTTACTCAGTCCAAGGAAGGCAAAACTTAACAGAGAACTAGTTGGGTACAGGAGAGAAAGAGTGGGCTATGATATGGAAAGCTTTAGGCCAGATAAATTAGATGATTATGGTGCTGGGGACAGAGGCAATGTGAGAGACGTTTTGGACTCGGACGTGGGTTCTGATTCAGAGTCCGATCTCTCCGATGATAGTAATCGTAGTGTTGGTGAAACGTTCGAGGAAGAGGATGTGAACATAACCAAATAA

Coding sequence (CDS)

ATGTCTCAATCCACCTCCATTCCCAGAAAGCTCGAAAGGGTTCGTGACCATGGCTACGATAATTACATGGATGTGGAGAAGAAAACCCGAAAAGTGCTCAAGTTTCAGGACCTTATTCTCACCCAAATTAACCAAACCATCCCAGTTTCTCGCCTTGATGTCTCAGCTCGTCGCCTTGGCTTCAAACAGCACGAAGCTGGGGCGTTCGTCCTCAAATTCCCTCATGTGTTTGAAATCTATGAGCACCCTGTTCAACGAATCCTCTATTGCAGGTTAACTCGAAAAGCCCATCTCCAAATCGAGCAGGAAAAGCAGGCTGTCATTGCGCAGATTCCGGATGCTGTGACTCGGCTGAGGAAGCTTTTGATGATGTCCAACAATGGCCGTCTTCGCCTCGAGCACATCCGAATCGCCCGGTCTGAGTTTGGGTTGCCTGACGATTTCGAGTATTCGGTAGTTCTCAAATACCCTCAATTCTTTAGACTGTTTGATGCAAAGGAAACCAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAATCTTACTGTTTGTGCAATAGAGAAAGCTAGGGAGAGAGTTTATAGAGAAAAAGGGAGTGATGCTGAGGATATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGATTCAAGATAGGGAAGTATTATAGAATTGCTGTGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCGTACGAGGACGTTTCTGAGTACGATATGAGGTCCATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTGTTTGACTGTAGAGAAGAAGATCAGTTTGGAACGGATTGCACATTTTCGATTGGCGATGGACCTGCCGAAGAAGTTGAAGGATTTCCTTCTTCAGCATCAGGGGATTTTCTACATTTCAACCAGAGGTAACCATGGGAAGCTTCACACTATTTTCCTCAGGGAGGCTTACAGGAGAGGTGAGTTAATAGAGCCAAATGATGTGTATTTGGCTAGAAGAACACTGGCTGAGTTGGTTTTACTCAGTCCAAGGAAGGCAAAACTTAACAGAGAACTAGTTGGGTACAGGAGAGAAAGAGTGGGCTATGATATGGAAAGCTTTAGGCCAGATAAATTAGATGATTATGGTGCTGGGGACAGAGGCAATGTGAGAGACGTTTTGGACTCGGACGTGGGTTCTGATTCAGAGTCCGATCTCTCCGATGATAGTAATCGTAGTGTTGGTGAAACGTTCGAGGAAGAGGATGTGAACATAACCAAATAA

Protein sequence

MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNRELVGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVGETFEEEDVNITK

Homology

[Close]

BLAST of Carg20771 vs. NCBI nr
Match: XP_022929109.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata])

HSP 1 Score: 842.4 bits (2175), Expect = 6.7e-241
Identity = 426/428 (99.53%), Postives = 426/428 (99.53%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG
Sbjct: 35  MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE
Sbjct: 215 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ
Sbjct: 275 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL
Sbjct: 335 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 394

Query: 361 VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVGETFE 420
           VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESD SDDSNRSV ETFE
Sbjct: 395 VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETFE 454

Query: 421 EEDVNITK 429
           EEDVNITK
Sbjct: 455 EEDVNITK 462

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BLAST of Carg20771 vs. NCBI nr
Match: XP_023551588.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 834.7 bits (2155), Expect = 1.4e-238
Identity = 420/428 (98.13%), Postives = 424/428 (99.07%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG
Sbjct: 35  MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE
Sbjct: 215 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFR AMDLPKKLKDFLLQ
Sbjct: 275 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRSAMDLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLREAYRRGELIEPNDVYLARRTLAELVLLSPRK+KLN+EL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKSKLNKEL 394

Query: 361 VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVGETFE 420
           VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESD SDDSNRSV ET E
Sbjct: 395 VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETLE 454

Query: 421 EEDVNITK 429
           EEDVN+TK
Sbjct: 455 EEDVNVTK 462

[Close]

BLAST of Carg20771 vs. NCBI nr
Match: XP_022970159.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima])

HSP 1 Score: 821.6 bits (2121), Expect = 1.2e-234
Identity = 413/428 (96.50%), Postives = 421/428 (98.36%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+K+ERVRDHGYDNYM+VEKK RKVLKFQDLILTQINQTIPVSRLDVSARRLG
Sbjct: 35  MSQSTSIPKKVERVRDHGYDNYMEVEKKIRKVLKFQDLILTQINQTIPVSRLDVSARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI+Q+KQAVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIQQQKQAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIE+VERDP
Sbjct: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIELVERDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE
Sbjct: 215 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFR AMDLPKKLKDFLLQ
Sbjct: 275 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRTAMDLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARR LAELVLLSPRKA+LNREL
Sbjct: 335 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRKLAELVLLSPRKAQLNREL 394

Query: 361 VGYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVGETFE 420
           VGYRRERVGYDMES RPDKLDDYG GDRGNVRDVLDSD+GSDSESD SDDSNRSV ETFE
Sbjct: 395 VGYRRERVGYDMESSRPDKLDDYGVGDRGNVRDVLDSDMGSDSESDFSDDSNRSVDETFE 454

Query: 421 EEDVNITK 429
           EEDVNITK
Sbjct: 455 EEDVNITK 462

[Close]

BLAST of Carg20771 vs. NCBI nr
Match: XP_016898810.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898812.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898813.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 751.1 bits (1938), Expect = 2.0e-213
Identity = 379/432 (87.73%), Postives = 406/432 (93.98%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+ L+RVRDHGYDNYM+VEKK RKVLKFQDLIL+Q NQTIPVSRLD+ ARRLG
Sbjct: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +LTVCAIE+ARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYE
Sbjct: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           D+SEYDMRSIEAQKRMEKRAVATIHEML LTVEKK++LERIAHFRLAM+LPKKLKDFLLQ
Sbjct: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLRE YRRGEL+EPNDVYLARR LAELVLLSPRKAKL+REL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394

Query: 361 VGYRRERVGYDMESFR----PDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVG 420
           VGYRRERVGYDME+ R     DK DD+G  ++GNVRDVLDSD+GSD ESD SDD N SV 
Sbjct: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV- 454

Query: 421 ETFEEEDVNITK 429
              E EDV+IT+
Sbjct: 455 ---EVEDVDITE 462

[Close]

BLAST of Carg20771 vs. NCBI nr
Match: KGN50418.1 (hypothetical protein Csa_5G173460 [Cucumis sativus])

HSP 1 Score: 746.1 bits (1925), Expect = 6.5e-212
Identity = 376/432 (87.04%), Postives = 405/432 (93.75%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+ L+RVRDHGYDNYM+VEKKTRKVLKFQ+LIL+Q NQTIPVSRLD+ ARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +LTVCAIE+ARERVYREKGSDAEDIRFSF+VNFPPGFKIGKY+RIA+WKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           D+SEYDMRSIEAQKRMEKRAVATIHEML LTVEKKI+LERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLRE YRR EL+EPNDVYLARR LAELVLLSPRKA ++REL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 361 VGYRRERVGYDMESFRPDKLD----DYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVG 420
           VGYRRERVGYDME+ R D ++    D+G  ++GNVRDVLDSD+GSD ESD SDD N SV 
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV- 420

Query: 421 ETFEEEDVNITK 429
              E EDV+IT+
Sbjct: 421 ---EVEDVDITE 428

[Close]

BLAST of Carg20771 vs. TAIR10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-168
Identity = 286/365 (78.36%), Postives = 328/365 (89.86%), Query Frame = 0


Query: 2   SQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARR--L 61
           SQST+IP+K +RVRDHGYDNYM+VEKK RKV+KF  LIL+Q N TI +S LD  ARR  L
Sbjct: 35  SQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGL 94

Query: 62  GFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLR 121
           GFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  E +AV+ QIPDAVTRLR
Sbjct: 95  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLR 154

Query: 122 KLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERD 181
           KL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LK+PQFFRL D +ETR+KYIEIVE+D
Sbjct: 155 KLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKD 214

Query: 182 PNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPY 241
           PNL++CAIE+ RE  YR KG DAED+RFSF+VNFPPGFKIGKY+RIAVWKWQRLPYWSPY
Sbjct: 215 PNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPY 274

Query: 242 EDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLL 301
           ED+S YD+RS+EAQ R+EKR+VA IHE+L LTVEKKI+LERIAHFR  M+LPKKLK+FLL
Sbjct: 275 EDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLL 334

Query: 302 QHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNRE 361
           QHQGIFYISTRGN+GKLHT+FLRE Y+RGEL+EPNDVYLARR LAELVL+SPRKAK++ E
Sbjct: 335 QHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAE 394

Query: 362 LVGYR 365
           LV YR
Sbjct: 395 LVRYR 399

[Close]

BLAST of Carg20771 vs. TAIR10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-62
Identity = 140/359 (39.00%), Postives = 210/359 (58.50%), Query Frame = 0


Query: 13  RVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLK 72
           R RDH  D  +   +K   +L+   L+ ++        +L    + L       GAF+ K
Sbjct: 68  RTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVSLQLMSRWKNLVGLNVNVGAFIGK 127

Query: 73  FPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRL 132
           +PH FEI+ HP  + L C++T K  + I++E+  V     DAV R++KLL++S +G LR+
Sbjct: 128 YPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHGVLRV 187

Query: 133 EHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVER-DPNLTVCAIEKAR 192
             +R+ R E GLP+DF  S++ KY   FRL D +      +E+V+R D +L V  +E+ R
Sbjct: 188 HALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVAKVEEWR 247

Query: 193 ERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI- 252
           E  YREK     +  ++F ++ P GFKI K +R  +  WQR+PY  P      YD + I 
Sbjct: 248 EVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKP------YDRKEIS 307

Query: 253 EAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTR 312
              +R EKR VA IHE+L LTVEK + +ER+AHFR  + +   +++ +L+H GIFY+ST+
Sbjct: 308 RGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIFYVSTK 367

Query: 313 GNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAK--LNRELVGYRRER 368
           G+     T+FLREAY +G LIEPN +Y  RR + +LVLL  R ++  L RE   +R E+
Sbjct: 368 GSS---QTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDETHREEK 412

[Close]

BLAST of Carg20771 vs. TAIR10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 224.9 bits (572), Expect = 9.2e-59
Identity = 145/361 (40.17%), Postives = 197/361 (54.57%), Query Frame = 0


Query: 2   SQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVS-ARRLG 61
           S +TS      R RD  ++  MD  K   KV+  QDL L   N T     L +    RL 
Sbjct: 23  STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLA--NPTADPPSLSIEFLSRLS 82

Query: 62  FKQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTR 121
            K H    A +F+ K+PH+F +   PV+   +CRLT  A     QE  A+ A +   V R
Sbjct: 83  QKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDR 142

Query: 122 LRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVE 181
           L +LL MS +  + L  +     E GLPDDFE SV+ K P  F+L D  E+    +E+V+
Sbjct: 143 LVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQ 202

Query: 182 RDPNLT--VCAIEKAR--ERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRL 241
            +        A+EK R  E    +   D  +I+FSF  ++PPG ++ K ++  V +WQRL
Sbjct: 203 EEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRL 262

Query: 242 PYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKK 301
           PY  PYED+     +S      +EKRAVA  HE L LTVEK + +E+I+HFR    +   
Sbjct: 263 PYVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLN 322

Query: 302 LKDFLLQHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRK 355
           ++D  L H G+FY+ST+   GK HT+FLREAY RG LI+PN VY ARR L +LVLL    
Sbjct: 323 IRDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHA 377

[Close]

BLAST of Carg20771 vs. TAIR10
Match: AT1G79120.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 146.0 bits (367), Expect = 5.4e-35
Identity = 107/341 (31.38%), Postives = 175/341 (51.32%), Query Frame = 0


Query: 8   PRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGF-KQHEA 67
           P++    R H  D  +D+ KK   +L+ + +I  Q + ++ +  L+   + +GF  +   
Sbjct: 57  PKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLE---KHVGFVHKWNL 116

Query: 68  GAFVLKFPHVFEI---YEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLM 127
            A + K+P +F +   ++ P     +  LT KA     +E +A  +  P  V  LRKLLM
Sbjct: 117 MAAIEKYPTIFYVGGGHKEPP----FVMLTEKAKKIAAEESEATESMEPILVNNLRKLLM 176

Query: 128 MSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVER-DPNL 187
           MS + R+ LE +   +S  GLP DF+ +++ KY +FF L   K    K   ++E  D +L
Sbjct: 177 MSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSL---KVINGKVNLVLENWDSSL 236

Query: 188 TVCAIEKARERV-YREKGSDAEDIRF----------SFIVNFPPGFKIGKYYRIAVWKWQ 247
            + A E    R  + E   D + +R           +F ++FPPGF+    Y     KWQ
Sbjct: 237 AITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQ 296

Query: 248 RLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLP 307
           ++ + SPY +   +D     A  +  KR VA +HE+L LT+EK+++  ++  F     LP
Sbjct: 297 KMEFPSPYLNARRFD----AADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLP 356

Query: 308 KKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYRRGELIE 333
            +L   L++HQGIFYI+ +G  G   T+FL++AY    LIE
Sbjct: 357 SRLILCLIKHQGIFYITNKGARG---TVFLKDAYAGSNLIE 380

[Close]

BLAST of Carg20771 vs. TAIR10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-34
Identity = 105/363 (28.93%), Postives = 188/363 (51.79%), Query Frame = 0


Query: 11  LERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAG-AF 70
           ++R ++  +D+ +  +KK + VL  + ++++Q ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 71  VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDA-VTRLRKLLMMSNNG 130
           + K+P VFEI E     + + ++T +A  ++  ++  +  ++ D  V +LRKL+MMS + 
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195

Query: 131 RLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIE 190
           R+ LE I   +++ GLP +F  ++  +YPQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 191 KA----RERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSE 250
            +    R R   E+    +       V  P G  + K     + +++ + Y SPY+D S 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 315

Query: 251 YDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGI 310
               ++E     EK A   IHE+L LT EK+  ++ + HFR      ++L+  L++H  +
Sbjct: 316 LRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDL 375

Query: 311 FYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLL-------SPRKAKLN 361
           FY+S +G      ++FLREAYR  ELI+ + + L +  +  LV +        PRK +  
Sbjct: 376 FYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEG 427

[Close]

BLAST of Carg20771 vs. Swiss-Prot
Match: sp|Q689D6|RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.6e-167
Identity = 286/365 (78.36%), Postives = 328/365 (89.86%), Query Frame = 0


Query: 2   SQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARR--L 61
           SQST+IP+K +RVRDHGYDNYM+VEKK RKV+KF  LIL+Q N TI +S LD  ARR  L
Sbjct: 35  SQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGL 94

Query: 62  GFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLR 121
           GFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  QI  E +AV+ QIPDAVTRLR
Sbjct: 95  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLR 154

Query: 122 KLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERD 181
           KL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LK+PQFFRL D +ETR+KYIEIVE+D
Sbjct: 155 KLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKD 214

Query: 182 PNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPY 241
           PNL++CAIE+ RE  YR KG DAED+RFSF+VNFPPGFKIGKY+RIAVWKWQRLPYWSPY
Sbjct: 215 PNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPY 274

Query: 242 EDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLL 301
           ED+S YD+RS+EAQ R+EKR+VA IHE+L LTVEKKI+LERIAHFR  M+LPKKLK+FLL
Sbjct: 275 EDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLL 334

Query: 302 QHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNRE 361
           QHQGIFYISTRGN+GKLHT+FLRE Y+RGEL+EPNDVYLARR LAELVL+SPRKAK++ E
Sbjct: 335 QHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAE 394

Query: 362 LVGYR 365
           LV YR
Sbjct: 395 LVRYR 399

[Close]

BLAST of Carg20771 vs. Swiss-Prot
Match: sp|B6TTV8|WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-37
Identity = 120/415 (28.92%), Postives = 215/415 (51.81%), Query Frame = 0


Query: 11  LERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGF-KQHEAGAF 70
           ++R ++  +D  +  +KK + VLK +++++ Q ++ + +  L    R LG  ++    A 
Sbjct: 55  VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114

Query: 71  VLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQEKQAVIAQIPDAVTRLRKLLM 130
           + +FP VF++ E  V  + + RLT  A       L++  E + +      AV +LRKLLM
Sbjct: 115 LRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGL------AVAKLRKLLM 174

Query: 131 MSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLT 190
           MS   R+ +E +   + + GLP +F  +V L+YPQ+FR+   +  R   +E+   DP L 
Sbjct: 175 MSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELA 234

Query: 191 VCAIEKARERVYREKGSDAED--------IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPY 250
           V A E A E     +  +AE+        ++F+  V  P G K+ +     + +++ +PY
Sbjct: 235 VSAAELAEE---ESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFKEMPY 294

Query: 251 WSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLK 310
            SPY D S   +RS   +K  EK A   +HE+L LTVEK+  ++ + HFR      + L+
Sbjct: 295 ISPYADFSH--LRSGSDEK--EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLR 354

Query: 311 DFLLQHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLS--PRK 370
             +++H  +FY+S +G+     ++FLREAY+  +L+E N + L +  +  LV +   PR+
Sbjct: 355 GMIIRHPDMFYVSFKGDR---DSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRR 414

Query: 371 AKLNRELVGYRRERVGYDMESFRPDKLDDYGAGDRG--NVRDVLDSDVGSDSESD 407
           A +     G   E +   ++S      ++Y   D G  ++ D++    G  S++D
Sbjct: 415 AAVG---TGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDAD 446

[Close]

BLAST of Carg20771 vs. Swiss-Prot
Match: sp|Q65XL5|WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-37
Identity = 124/411 (30.17%), Postives = 214/411 (52.07%), Query Frame = 0


Query: 11  LERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGF-KQHEAGAF 70
           ++R ++  +DN +  +KK + VLK ++++++  ++ + +  L    R LG  ++    A 
Sbjct: 61  VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120

Query: 71  VLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQEKQAVIAQIPDAVTRLRKLLM 130
           + +FP VFE+ E  V  + + RLT  A       L ++ E + +      AVT+LRKLLM
Sbjct: 121 LKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGL------AVTKLRKLLM 180

Query: 131 MSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLT 190
           MS + R+ +E I   +++ GLP +F  ++ L+YPQ+FR+   +  R   +E+   DP L 
Sbjct: 181 MSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV--VQMDRGPGLELTHWDPELA 240

Query: 191 VCAIE------KARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWS 250
           V A E      +ARE   R    D   ++F+  V  P G K+ +     V +++ +PY S
Sbjct: 241 VSAAEVAEEENRAREEQERNLIID-RPLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYIS 300

Query: 251 PYEDVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDF 310
           PY D S   +RS  A+K  EK A   +HE+L LT+EK+  ++ + HFR      + L+  
Sbjct: 301 PYSDFSH--LRSGSAEK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGM 360

Query: 311 LLQHQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLN 370
           L++H  +FY+S +G+     ++FLREAY+  +L+E + + L +  +  LV + PR  +  
Sbjct: 361 LIRHPDMFYVSLKGDR---DSVFLREAYKNSQLVEKSKLVLLKEKMRALVAV-PRFPRRG 420

Query: 371 RELVGYRRERV--GYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESD 407
                   +R      M S   D  DD   G   ++ D++    G  S++D
Sbjct: 421 VPATSEEADRTNGAAQMLSEGSDVEDDEDEG-LSDMEDLISEISGGKSDTD 451

[Close]

BLAST of Carg20771 vs. Swiss-Prot
Match: sp|A0MFS5|WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.2e-33
Identity = 105/363 (28.93%), Postives = 188/363 (51.79%), Query Frame = 0


Query: 11  LERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAG-AF 70
           ++R ++  +D+ +  +KK + VL  + ++++Q ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 71  VLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDA-VTRLRKLLMMSNNG 130
           + K+P VFEI E     + + ++T +A  ++  ++  +  ++ D  V +LRKL+MMS + 
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195

Query: 131 RLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIE 190
           R+ LE I   +++ GLP +F  ++  +YPQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 191 KA----RERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSE 250
            +    R R   E+    +       V  P G  + K     + +++ + Y SPY+D S 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 315

Query: 251 YDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGI 310
               ++E     EK A   IHE+L LT EK+  ++ + HFR      ++L+  L++H  +
Sbjct: 316 LRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDL 375

Query: 311 FYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLL-------SPRKAKLN 361
           FY+S +G      ++FLREAYR  ELI+ + + L +  +  LV +        PRK +  
Sbjct: 376 FYVSLKGER---DSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEG 427

[Close]

BLAST of Carg20771 vs. TrEMBL
Match: tr|A0A1S4DS47|A0A1S4DS47_CUCME (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 1.3e-213
Identity = 379/432 (87.73%), Postives = 406/432 (93.98%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+ L+RVRDHGYDNYM+VEKK RKVLKFQDLIL+Q NQTIPVSRLD+ ARRLG
Sbjct: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRK
Sbjct: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP
Sbjct: 155 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +LTVCAIE+ARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYE
Sbjct: 215 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           D+SEYDMRSIEAQKRMEKRAVATIHEML LTVEKK++LERIAHFRLAM+LPKKLKDFLLQ
Sbjct: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLRE YRRGEL+EPNDVYLARR LAELVLLSPRKAKL+REL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 394

Query: 361 VGYRRERVGYDMESFR----PDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVG 420
           VGYRRERVGYDME+ R     DK DD+G  ++GNVRDVLDSD+GSD ESD SDD N SV 
Sbjct: 395 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV- 454

Query: 421 ETFEEEDVNITK 429
              E EDV+IT+
Sbjct: 455 ---EVEDVDITE 462

[Close]

BLAST of Carg20771 vs. TrEMBL
Match: tr|A0A0A0KLD1|A0A0A0KLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 4.3e-212
Identity = 376/432 (87.04%), Postives = 405/432 (93.75%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+ L+RVRDHGYDNYM+VEKKTRKVLKFQ+LIL+Q NQTIPVSRLD+ ARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQ+K+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +LTVCAIE+ARERVYREKGSDAEDIRFSF+VNFPPGFKIGKY+RIA+WKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           D+SEYDMRSIEAQKRMEKRAVATIHEML LTVEKKI+LERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLRE YRR EL+EPNDVYLARR LAELVLLSPRKA ++REL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 361 VGYRRERVGYDMESFRPDKLD----DYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVG 420
           VGYRRERVGYDME+ R D ++    D+G  ++GNVRDVLDSD+GSD ESD SDD N SV 
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSV- 420

Query: 421 ETFEEEDVNITK 429
              E EDV+IT+
Sbjct: 421 ---EVEDVDITE 428

[Close]

BLAST of Carg20771 vs. TrEMBL
Match: tr|A0A2N9HUP9|A0A2N9HUP9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43944 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 3.7e-187
Identity = 337/427 (78.92%), Postives = 380/427 (88.99%), Query Frame = 0


Query: 2   SQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGF 61
           SQSTSIP+K ERVRDHGYDNYM++EKKTRKVLKFQDLIL+QINQT+P+SRLD+ +RRLGF
Sbjct: 38  SQSTSIPKKQERVRDHGYDNYMEIEKKTRKVLKFQDLILSQINQTLPISRLDLLSRRLGF 97

Query: 62  KQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKL 121
           KQHEAGAFVLKFPHVFEIYEHPVQRILY RLTRKA LQI+QEKQA+IAQIPDAVTRLRKL
Sbjct: 98  KQHEAGAFVLKFPHVFEIYEHPVQRILYIRLTRKATLQIQQEKQALIAQIPDAVTRLRKL 157

Query: 122 LMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPN 181
           +MMSN GRLRLEH+RIAR + GLPDDFEYSV+LKYPQ+FRLFDAKETRNKYIEIVERD +
Sbjct: 158 IMMSNTGRLRLEHVRIARRDLGLPDDFEYSVILKYPQYFRLFDAKETRNKYIEIVERDES 217

Query: 182 LTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYED 241
           L VC IE+ARER YR KG  AEDIRFSFIVNFPPGFKIGKYYRIAVWKWQR+PYWSPYED
Sbjct: 218 LAVCTIERAREREYRVKGIAAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRVPYWSPYED 277

Query: 242 VSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQH 301
           VS YD+RSIEAQKRMEKRAVATIHE+L LTVEKKI+LERIAHFRLAM+LPKKLK+FLLQH
Sbjct: 278 VSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRLAMNLPKKLKEFLLQH 337

Query: 302 QGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNRELV 361
           QGIFYISTRGN GKLHT+FLREAY+RG+LIEPND+YLARRTLAELVLLSPRKAK++RELV
Sbjct: 338 QGIFYISTRGNQGKLHTVFLREAYKRGDLIEPNDLYLARRTLAELVLLSPRKAKVDRELV 397

Query: 362 GYRRERVGYDMESFRPDKLDDYGAGDRGNVRDVLDSDVGSDSESDLSDDSNRSVGETFEE 421
            YRR+    +M   R + + + G    G   D LD D+ SD+ SD +D+ +  V ET + 
Sbjct: 398 NYRRDGEDDEMSRVRSEFVGNGGKDREG--EDDLDLDMVSDAGSDFTDEDDDCV-ETVDA 457

Query: 422 EDVNITK 429
           EDV++T+
Sbjct: 458 EDVHVTE 461

[Close]

BLAST of Carg20771 vs. TrEMBL
Match: tr|A0A2P4ILN6|A0A2P4ILN6_QUESU (Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_08673 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 5.9e-185
Identity = 331/438 (75.57%), Postives = 387/438 (88.36%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+KL+RVRDHGYDNYM+VEKKTRKVLKFQDLIL+Q+N T+P+SRLD+ +RRLG
Sbjct: 1   MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQLNHTLPISRLDLLSRRLG 60

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQHEAGAFVLKFPHVFEI+EHPVQRILY RLTR+A LQI+QEKQA+IAQ+PDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIFEHPVQRILYIRLTRRAILQIQQEKQALIAQVPDAVTRLRK 120

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           L+MMSN GRLRLEH+RIAR E GLPDDFEYSV+LKYPQ+F+LFDAKETRNKYIEIVERD 
Sbjct: 121 LIMMSNTGRLRLEHVRIARKELGLPDDFEYSVILKYPQYFQLFDAKETRNKYIEIVERDE 180

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +L VCAIE+ARE+ YREKG DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQR+PYWSPYE
Sbjct: 181 SLAVCAIERAREKEYREKGVDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRVPYWSPYE 240

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           DVS YD+RS+EAQKRMEKRAVATIHE+L LTVEKKI+LERIAHFR+AM+LPK+LK+FLLQ
Sbjct: 241 DVSGYDLRSLEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKRLKEFLLQ 300

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGN GKLHT+FLREAY+RGEL+EPND+Y+ARR LA+LVLLSPRKAK++REL
Sbjct: 301 HQGIFYISTRGNLGKLHTVFLREAYKRGELVEPNDLYMARRQLADLVLLSPRKAKVDREL 360

Query: 361 VGYRRERVGYDMESFRPDKLDD----YGAGDRGNVR------DVLDSDVGSDSESDLSDD 420
           V YRR+     M   R + +++    +  G+  NV+      D LDSD+ SD+ SD SD+
Sbjct: 361 VNYRRDXXXXXMVRVRSEFVENGSQSFAVGN--NVKKDREEEDDLDSDIISDAGSDYSDE 420

Query: 421 SNRSVGETFEEEDVNITK 429
            +  + ET + ED ++T+
Sbjct: 421 DDDCL-ETLDAEDAHVTE 435

[Close]

BLAST of Carg20771 vs. TrEMBL
Match: tr|A0A251QRB6|A0A251QRB6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G291500 PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 1.6e-182
Identity = 325/414 (78.50%), Postives = 366/414 (88.41%), Query Frame = 0


Query: 1   MSQSTSIPRKLERVRDHGYDNYMDVEKKTRKVLKFQDLILTQINQTIPVSRLDVSARRLG 60
           MSQSTSIP+K ERVRDHGYDNYM+VEKKTRKV KFQDLIL+Q NQ I +SRLD+ ARRLG
Sbjct: 35  MSQSTSIPKKQERVRDHGYDNYMEVEKKTRKVHKFQDLILSQPNQVIQISRLDLLARRLG 94

Query: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRK 120
           FKQ+EAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEK+A+I QIPDAVT LRK
Sbjct: 95  FKQNEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQEKKALIDQIPDAVTCLRK 154

Query: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDP 180
           LLMMSN GRLRLEH+RIAR+EFGLPDDFEYSV++KYPQ+FRLFDA+ETRNKYIE+VE+DP
Sbjct: 155 LLMMSNTGRLRLEHVRIARAEFGLPDDFEYSVIIKYPQYFRLFDAQETRNKYIEVVEKDP 214

Query: 181 NLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYE 240
           +L+VCAIEK RE  YREKG DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQR+PYWSPYE
Sbjct: 215 SLSVCAIEKLREIEYREKGIDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRVPYWSPYE 274

Query: 241 DVSEYDMRSIEAQKRMEKRAVATIHEMLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQ 300
           DVS YD+RS+EAQKRMEKRAVA IHE+L LTVEKKI+LERIAHFR+AM+LP KLK+FLLQ
Sbjct: 275 DVSGYDLRSLEAQKRMEKRAVAVIHELLSLTVEKKITLERIAHFRMAMNLPNKLKEFLLQ 334

Query: 301 HQGIFYISTRGNHGKLHTIFLREAYRRGELIEPNDVYLARRTLAELVLLSPRKAKLNREL 360
           HQGIFYISTRGNHGKLHT+FLREAY++GELIEPND+YLARR LAELVL+SPRKAK++REL
Sbjct: 335 HQGIFYISTRGNHGKLHTVFLREAYKKGELIEPNDLYLARRKLAELVLISPRKAKVDREL 394

Query: 361 VGYRRERVGYDMESFRPD----KLDDYG----AGDRGNVRDVLDSDVGSDSESD 407
           V Y R+    +    R D      +D+G     G    V D ++SD+G D +SD
Sbjct: 395 VSYHRDWEDDERGHIRRDHVENSFEDFGGRNTVGQDRGVDDDMNSDMGGDYDSD 448

The following BLAST results are available for this feature:

BLAST of Carg20771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929109.1	6.7e-241	99.53	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]	[more]
XP_023551588.1	1.4e-238	98.13	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022970159.1	1.2e-234	96.50	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima]	[more]
XP_016898810.1	2.0e-213	87.73	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PR...	[more]
KGN50418.1	6.5e-212	87.04	hypothetical protein Csa_5G173460 [Cucumis sativus]	[more]

BLAST of Carg20771 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33495.1	1.4e-168	78.36	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G45790.2	3.0e-62	39.00	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G06440.1	9.2e-59	40.17	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G79120.1	5.4e-35	31.38	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	1.2e-34	28.93	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of Carg20771 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q689D6\|RPD1_ARATH	2.6e-167	78.36	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
sp\|B6TTV8\|WTF1_MAIZE	1.1e-37	28.92	Protein WHAT'S THIS FACTOR 1 OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1	[more]
sp\|Q65XL5\|WTF1_ORYSJ	1.9e-37	30.17	Protein WHAT'S THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|A0MFS5\|WTF1_ARATH	2.2e-33	28.93	Protein WHAT'S THIS FACTOR 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g0103...	[more]

BLAST of Carg20771 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DS47\|A0A1S4DS47_CUCME	1.3e-213	87.73	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4...	[more]
tr\|A0A0A0KLD1\|A0A0A0KLD1_CUCSA	4.3e-212	87.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1	[more]
tr\|A0A2N9HUP9\|A0A2N9HUP9_FAGSY	3.7e-187	78.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43944 PE=4 SV=1	[more]
tr\|A0A2P4ILN6\|A0A2P4ILN6_QUESU	5.9e-185	75.57	Protein root primordium defective 1 OS=Quercus suber OX=58331 GN=CFP56_08673 PE=...	[more]
tr\|A0A251QRB6\|A0A251QRB6_PRUPE	1.6e-182	78.50	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G291500 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20771-RA	Carg20771-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 14..350 e-value: 5.2E-110 score: 367.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..399
None	No IPR available	PANTHER	PTHR31476:SF9	PROTEIN ROOT PRIMORDIUM DEFECTIVE 1	coord: 1..406
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 1..406

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20771	Cla002339	Watermelon (97103) v1	carwmB0737
Carg20771	Csa5G173460	Cucumber (Chinese Long) v2	carcuB0756
Carg20771	MELO3C005376	Melon (DHL92) v3.5.1	carmeB0735
Carg20771	ClCG01G005540	Watermelon (Charleston Gray)	carwcgB0716
Carg20771	CSPI05G08390	Wild cucumber (PI 183967)	carcpiB0773
Carg20771	Cucsa.166450	Cucumber (Gy14) v1	carcgyB0831
Carg20771	CmaCh15G014090	Cucurbita maxima (Rimu)	carcmaB1033
Carg20771	CmoCh15G014810	Cucurbita moschata (Rifu)	carcmoB1004
Carg20771	Lsi09G005870	Bottle gourd (USVL1VR-Ls)	carlsiB676
Carg20771	Cp4.1LG13g00400	Cucurbita pepo (Zucchini)	carcpeB1040
Carg20771	CsGy5G005780	Cucumber (Gy14) v2	carcgybB0735
Carg20771	MELO3C005376.2	Melon (DHL92) v3.6.1	carmedB0746
Carg20771	CsaV3_5G005780	Cucumber (Chinese Long) v3	carcucB0776
Carg20771	Cla97C01G005790	Watermelon (97103) v2	carwmbB0774
Carg20771	Bhi12G000484	Wax gourd	carwgoB0873

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20771	Silver-seed gourd	carcarB584
Carg20771	Cucurbita maxima (Rimu)	carcmaB1034
Carg20771	Cucurbita moschata (Rifu)	carcmoB1005
Carg20771	Cucurbita pepo (Zucchini)	carcpeB1041