Csa5G157230 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G157230
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Transcription factor bHLH36; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
Location	Chr5 : 5513390 .. 5514390 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTGGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCGAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGTAAAACTCATCGGTGCCTCATCAAATGTTATTTTATTATATATATATATATATATATACTTTGAAAGTAGATGAAAAAGAAAGATTTTGAGAGAGTTCGAGAAAAACAAAAACTATCATGATAATATAGAATTTCAAAATCCCCCATTATTTGGCCTATTGCATTTCACAAGAGAACTTAAAAGAAAAATTAAATAAAAATGGTTATAATATTTGTATGTGAAAAATTACAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCAGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAATCTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAGAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAA

mRNA sequence

ATGGACTTGGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCGAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCAGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAATCTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAGAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAA

Coding sequence (CDS)

ATGGACTTGGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCGAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCAGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAATCTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAGAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAA

Protein sequence

MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMSELQNKLTNLEYFPLD*

Homology

[Close]

BLAST of Csa5G157230 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.5e-26
Identity = 73/203 (35.96%), Postives = 116/203 (57.14%), Query Frame = 1


Query: 54  KGRRRKSPNTSADIED-------ENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 113
           KG +R+ P +SA            +   +  KKKK++HRD+ERQRRQEM+TL+A LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 114 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNI--TTIETL 173
           P++Y+KGKR++ DH++  V +I+  + +I+ L  +RDEL +    G  S      T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 174 NSSKRDSVLVMPRSCG-GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFL 233
             S+  +V+V P   G  V +  +++    LPLS +++ +  + L+++S  +TR NDR +
Sbjct: 130 GKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLM 189

Query: 234 HTIESEAAVDVETIDMSELQNKL 247
           HTI+ E       ID+  LQ KL
Sbjct: 190 HTIQVEVN-SFGCIDLLWLQQKL 211

[Close]

BLAST of Csa5G157230 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-25
Identity = 73/201 (36.32%), Postives = 113/201 (56.22%), Query Frame = 1


Query: 47  NISEKPKKGRRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 106
           N S  PKK R +       D           K+KK++HR++ERQRRQEM+ L+A+LRS L
Sbjct: 2   NPSNNPKKTRHQSHMPQERD--------ETKKEKKLLHRNIERQRRQEMAILFASLRSQL 61

Query: 107 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNS 166
           P++Y+KGKR++ DH++  V +I+  QT+I+ L  +RDELK+ I D        +    + 
Sbjct: 62  PLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSR 121

Query: 167 SKRDSVLVMPRSCGGVQILLDTATH-HRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHT 226
           S+  SV+V P   G   ++   A+     PLS +++ L  Q L++IS  + R N+R ++T
Sbjct: 122 SEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYT 181

Query: 227 IESEAAVDVETIDMSELQNKL 247
           I+ E     +  D++ LQ KL
Sbjct: 182 IQVEVN-SFDCFDLAWLQQKL 193

[Close]

BLAST of Csa5G157230 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.4e-25
Identity = 73/199 (36.68%), Postives = 114/199 (57.29%), Query Frame = 1


Query: 58  RKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 117
           R++  T+  + +     +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS 
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSS 112

Query: 118 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSK-----RDSV 177
            DH+ E V YI+ +Q KI+ +  KRD +K++I     SR   +I +L SS        ++
Sbjct: 113 ADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITH-PSSRGEFSIRSLASSTCSCVGDTNI 172

Query: 178 LVMPRSC-GGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRKNDRFLHTIESEA 237
            V+ R C  G++I++     H   LS++++ L   Q   I+SC STR +  F+HTI SE 
Sbjct: 173 AVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 232

Query: 238 AVDVETIDMSELQNKLTNL 250
              +E +  SELQ K+  +
Sbjct: 233 EEGIE-VYFSELQEKIIKI 249

[Close]

BLAST of Csa5G157230 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.3e-25
Identity = 72/211 (34.12%), Postives = 119/211 (56.40%), Query Frame = 1


Query: 56  RRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKR 115
           ++R   + +    + N N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKR
Sbjct: 50  KKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKR 109

Query: 116 SICDHMHETVKYIQHMQTKIQMLRNKRDELKK----------NIEDGEDSRNITTIETLN 175
           S  DH+ + V YI+ +Q KI+ L  KR+ +KK           IE+   S + +   TL+
Sbjct: 110 STSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLS 169

Query: 176 SS------KRDSVLVMPRSCGGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRK 235
           SS      K  +V+V P   G   I+      ++  LS++++ L   Q   ++SC S R+
Sbjct: 170 SSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARR 229

Query: 236 NDRFLHTIESEAAVDVETIDMSELQNKLTNL 250
             RF+HTI S+   D + I++ EL++K+  +
Sbjct: 230 QQRFMHTIVSQVE-DGKQINILELKDKIMTM 259

[Close]

BLAST of Csa5G157230 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.1e-20
Identity = 62/180 (34.44%), Postives = 105/180 (58.33%), Query Frame = 1


Query: 80  KKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTKIQMLR 139
           +K++HR+ ERQRRQEM++LYA+LRSLLP+ ++KGKRS  D ++E V YI+++Q KI+ L 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 140 NKRDELK-------KNIEDGEDSRNITTIETLNSSKRDSVLVMPRSC-GGVQILLDTATH 199
            +RD+L            +G+   ++  I   N        V+ R C  GV+I+L +   
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH-------VVVRQCLVGVEIMLSSRCC 121

Query: 200 HRLP-LSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMSELQNKLTNLE 251
              P  S++++ L    L +++  S+  +DR ++TI++E       ID++EL+ +L  ++
Sbjct: 122 GGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]

BLAST of Csa5G157230 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-142
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of Csa5G157230 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.2e-141
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDS NITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIE+EAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of Csa5G157230 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 154/263 (58.56%), Postives = 188/263 (71.48%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK ++    +  +   ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPGMVETETLQSTKRDKVVVRAR 180

Query: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVET 240
              GG+Q++LDT T HRL LSN+++ LI Q  +I+SC S + NDRFLHTIES+ AV  +T
Sbjct: 181 DGSGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240

Query: 241 ----IDMSELQNKLTNLEYFPLD 256
               ID+S+LQ  L NLEY PLD
Sbjct: 241 NSPLIDISDLQYMLANLEYCPLD 260

[Close]

BLAST of Csa5G157230 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.1e-59
Identity = 135/260 (51.92%), Postives = 178/260 (68.46%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           M++   +SPF FD  ++L PLPSL     S    PPL    +N    +S+KPK GRR+K 
Sbjct: 1   MEMFNAESPFSFDVGEDLVPLPSLPS---SSVISPPL----DNYGNRVSQKPKNGRRKKP 60

Query: 61  -PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICD 120
            PNT  D +  + N +E KKKKIIHRDVERQRRQEMS+LY  LRSLLP+EYLKGKRSI D
Sbjct: 61  LPNTCND-DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISD 120

Query: 121 HMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSC 180
           HM ETV YIQHMQ +IQ L++KR  L++ +          T ETLNSS+R S +V  +  
Sbjct: 121 HMQETVSYIQHMQRRIQQLKDKRGTLRE-LASQTTVAIAGTTETLNSSERASAVVRAKDG 180

Query: 181 GGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVE---- 240
            G+Q++LDTAT  RLPLS  ++ L+++ L+I++C S R N+RF+HTIE +  ++ +    
Sbjct: 181 IGIQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYP 240

Query: 241 TIDMSELQNKLTNLEYFPLD 256
           TID+S LQ+KL NLEY+PLD
Sbjct: 241 TIDVSVLQHKLANLEYYPLD 251

[Close]

BLAST of Csa5G157230 vs. TrEMBL
Match: B9GKR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.3e-44
Identity = 107/248 (43.15%), Postives = 149/248 (60.08%), Query Frame = 1


Query: 3   LDCIQSPFPFD--QVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 62
           +D I S F  D    D+L    S  P          +         +++ K + GRRRKS
Sbjct: 1   MDYISSVFQIDYNSTDDLVQYFSSFPTQQQTTPKDKVPLRPYEDCHDLANKTQHGRRRKS 60

Query: 63  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 122
           P     ++DENPN N  KKKKIIHRD+ERQRRQEM+ LY +LR LLP++YLKGKRS  DH
Sbjct: 61  PIALGSVKDENPNDN--KKKKIIHRDIERQRRQEMANLYGSLRCLLPLKYLKGKRSTSDH 120

Query: 123 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 182
           +H+TV YI+H + KIQ L +K+DELK+ +         + +E L   +RD++ V  R C 
Sbjct: 121 IHQTVYYIKHQEEKIQKLIDKKDELKRYLSTS------SALENLEGCERDTLTVRTR-CV 180

Query: 183 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 242
           GV++ ++TA     PLS ++  LI +   ++SC ST+ N+R LH I SE   D  ++D+S
Sbjct: 181 GVEVDINTALKKGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISE-VTDGRSLDIS 238

Query: 243 ELQNKLTN 249
           ELQ KLT+
Sbjct: 241 ELQQKLTS 238

[Close]

BLAST of Csa5G157230 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.2e-27
Identity = 73/203 (35.96%), Postives = 116/203 (57.14%), Query Frame = 1


Query: 54  KGRRRKSPNTSADIED-------ENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 113
           KG +R+ P +SA            +   +  KKKK++HRD+ERQRRQEM+TL+A LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 114 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNI--TTIETL 173
           P++Y+KGKR++ DH++  V +I+  + +I+ L  +RDEL +    G  S      T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 174 NSSKRDSVLVMPRSCG-GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFL 233
             S+  +V+V P   G  V +  +++    LPLS +++ +  + L+++S  +TR NDR +
Sbjct: 130 GKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLM 189

Query: 234 HTIESEAAVDVETIDMSELQNKL 247
           HTI+ E       ID+  LQ KL
Sbjct: 190 HTIQVEVN-SFGCIDLLWLQQKL 211

[Close]

BLAST of Csa5G157230 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 73/201 (36.32%), Postives = 113/201 (56.22%), Query Frame = 1


Query: 47  NISEKPKKGRRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 106
           N S  PKK R +       D           K+KK++HR++ERQRRQEM+ L+A+LRS L
Sbjct: 2   NPSNNPKKTRHQSHMPQERD--------ETKKEKKLLHRNIERQRRQEMAILFASLRSQL 61

Query: 107 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNS 166
           P++Y+KGKR++ DH++  V +I+  QT+I+ L  +RDELK+ I D        +    + 
Sbjct: 62  PLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSR 121

Query: 167 SKRDSVLVMPRSCGGVQILLDTATH-HRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHT 226
           S+  SV+V P   G   ++   A+     PLS +++ L  Q L++IS  + R N+R ++T
Sbjct: 122 SEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYT 181

Query: 227 IESEAAVDVETIDMSELQNKL 247
           I+ E     +  D++ LQ KL
Sbjct: 182 IQVEVN-SFDCFDLAWLQQKL 193

[Close]

BLAST of Csa5G157230 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.6e-26
Identity = 73/199 (36.68%), Postives = 114/199 (57.29%), Query Frame = 1


Query: 58  RKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 117
           R++  T+  + +     +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS 
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSS 112

Query: 118 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSK-----RDSV 177
            DH+ E V YI+ +Q KI+ +  KRD +K++I     SR   +I +L SS        ++
Sbjct: 113 ADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITH-PSSRGEFSIRSLASSTCSCVGDTNI 172

Query: 178 LVMPRSC-GGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRKNDRFLHTIESEA 237
            V+ R C  G++I++     H   LS++++ L   Q   I+SC STR +  F+HTI SE 
Sbjct: 173 AVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 232

Query: 238 AVDVETIDMSELQNKLTNL 250
              +E +  SELQ K+  +
Sbjct: 233 EEGIE-VYFSELQEKIIKI 249

[Close]

BLAST of Csa5G157230 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-26
Identity = 72/211 (34.12%), Postives = 119/211 (56.40%), Query Frame = 1


Query: 56  RRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKR 115
           ++R   + +    + N N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKR
Sbjct: 50  KKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKR 109

Query: 116 SICDHMHETVKYIQHMQTKIQMLRNKRDELKK----------NIEDGEDSRNITTIETLN 175
           S  DH+ + V YI+ +Q KI+ L  KR+ +KK           IE+   S + +   TL+
Sbjct: 110 STSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLS 169

Query: 176 SS------KRDSVLVMPRSCGGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRK 235
           SS      K  +V+V P   G   I+      ++  LS++++ L   Q   ++SC S R+
Sbjct: 170 SSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARR 229

Query: 236 NDRFLHTIESEAAVDVETIDMSELQNKLTNL 250
             RF+HTI S+   D + I++ EL++K+  +
Sbjct: 230 QQRFMHTIVSQVE-DGKQINILELKDKIMTM 259

[Close]

BLAST of Csa5G157230 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-21
Identity = 62/180 (34.44%), Postives = 105/180 (58.33%), Query Frame = 1


Query: 80  KKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTKIQMLR 139
           +K++HR+ ERQRRQEM++LYA+LRSLLP+ ++KGKRS  D ++E V YI+++Q KI+ L 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 140 NKRDELK-------KNIEDGEDSRNITTIETLNSSKRDSVLVMPRSC-GGVQILLDTATH 199
            +RD+L            +G+   ++  I   N        V+ R C  GV+I+L +   
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH-------VVVRQCLVGVEIMLSSRCC 121

Query: 200 HRLP-LSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMSELQNKLTNLE 251
              P  S++++ L    L +++  S+  +DR ++TI++E       ID++EL+ +L  ++
Sbjct: 122 GGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]

BLAST of Csa5G157230 vs. NCBI nr
Match: gi|700194987|gb|KGN50164.1| (hypothetical protein Csa_5G157230 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 2.2e-142
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of Csa5G157230 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 3.2e-141
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDS NITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIE+EAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of Csa5G157230 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 156/261 (59.77%), Postives = 195/261 (74.71%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPI-HLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD  DEL PLPSLS I +  V   P ++ + NN +  +S +PK GRR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSIC 120
            P NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSIC
Sbjct: 61  PPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIC 120

Query: 121 DHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPR- 180
           DHMHETVKYI++MQ+KIQ L +KRDELKK ++    + ++   ETL S+KRD V+V  R 
Sbjct: 121 DHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPDMVETETLKSTKRDKVVVRARD 180

Query: 181 SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESE---AAVDV 240
             GG+Q++LDTAT HRLPLSN++  L  Q L+I+SC S + NDRFLHTIES+    + + 
Sbjct: 181 GSGGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNS 240

Query: 241 ETIDMSELQNKLTNLEYFPLD 256
             ID+S LQ  LTNLEY PLD
Sbjct: 241 PIIDVSGLQYTLTNLEYCPLD 259

[Close]

BLAST of Csa5G157230 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 7.7e-71
Identity = 149/261 (57.09%), Postives = 192/261 (73.56%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPI-HLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD  DEL PLPSLS I +  V   P ++ + NN +  +S +PK GRR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSIC 120
            P NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI 
Sbjct: 61  PPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIS 120

Query: 121 DHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRS 180
           DHM ETV YIQHMQ +IQ L++KRD+L++     +    I T ETLNSS+RDSV+V  + 
Sbjct: 121 DHMQETVSYIQHMQRRIQQLKDKRDKLRELA--NQTMVIIGTTETLNSSERDSVVVRAKD 180

Query: 181 CGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVE--- 240
             G+Q++LDTAT HRLPLS  ++ L+ + L+I++C S R N+RF+HTIE +  +  +   
Sbjct: 181 GIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCY 240

Query: 241 -TIDMSELQNKLTNLEYFPLD 256
            TID S LQ+KL NLEY+PLD
Sbjct: 241 PTIDASMLQHKLANLEYYPLD 258

[Close]

BLAST of Csa5G157230 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 2.9e-70
Identity = 154/263 (58.56%), Postives = 188/263 (71.48%), Query Frame = 1


Query: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK ++    +  +   ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPGMVETETLQSTKRDKVVVRAR 180

Query: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVET 240
              GG+Q++LDT T HRL LSN+++ LI Q  +I+SC S + NDRFLHTIES+ AV  +T
Sbjct: 181 DGSGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240

Query: 241 ----IDMSELQNKLTNLEYFPLD 256
               ID+S+LQ  L NLEY PLD
Sbjct: 241 NSPLIDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:

BLAST of Csa5G157230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH126_ARATH	7.5e-26	35.96	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	[more]
BH120_ARATH	2.2e-25	36.32	Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2	[more]
BH055_ARATH	6.4e-25	36.68	Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1	[more]
BH125_ARATH	8.3e-25	34.12	Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1	[more]
BH036_ARATH	8.1e-20	34.44	Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1	[more]

BLAST of Csa5G157230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMQ4_CUCSA	1.5e-142	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1	[more]
A0A097IYP0_CUCSA	2.2e-141	99.22	BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1	[more]
A0A0A0KKN9_CUCSA	2.0e-70	58.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1	[more]
A0A097IYN6_CUCSA	2.1e-59	51.92	BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1	[more]
B9GKR8_POPTR	4.3e-44	43.15	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1	[more]

BLAST of Csa5G157230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25410.1	4.2e-27	35.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.2e-26	36.32	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	3.6e-26	36.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	4.7e-26	34.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	4.5e-21	34.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Csa5G157230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194987\|gb\|KGN50164.1\|	2.2e-142	100.00	hypothetical protein Csa_5G157230 [Cucumis sativus]	[more]
gi\|821595271\|ref\|NP_001295841.1\|	3.2e-141	99.22	transcription factor bHLH118-like [Cucumis sativus]	[more]
gi\|659073658\|ref\|XP_008437182.1\|	1.1e-74	59.77	PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]	[more]
gi\|659073660\|ref\|XP_008437183.1\|	7.7e-71	57.09	PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo]	[more]
gi\|449459720\|ref\|XP_004147594.1\|	2.9e-70	58.56	PREDICTED: transcription factor bHLH36-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR015660	MASH1/Ascl1a-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G157230.1	Csa5G157230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 81..150 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 83..132 score: 4.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 85..137 score: 4.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 79..131 score: 12
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 77..149 score: 2.88
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 40..248 score: 5.2
None	No IPR available	unknown	Coil	Coil	coord: 128..155 scor
None	No IPR available	PANTHER	PTHR13935:SF54	TRANSCRIPTION FACTOR BHLH118-RELATED	coord: 40..248 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G157230	MELO3C034003.2	Melon (DHL92) v3.6.1	cumedB336
Csa5G157230	CmaCh18G012040	Cucurbita maxima (Rimu)	cmacuB420

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G157230	Melon (DHL92) v3.5.1	cumeB357
Csa5G157230	Melon (DHL92) v3.5.1	cumeB401
Csa5G157230	Melon (DHL92) v3.5.1	cumeB405
Csa5G157230	Watermelon (Charleston Gray)	cuwcgB351
Csa5G157230	Watermelon (Charleston Gray)	cuwcgB364
Csa5G157230	Watermelon (97103) v1	cuwmB403
Csa5G157230	Watermelon (97103) v1	cuwmB408
Csa5G157230	Cucurbita pepo (Zucchini)	cpecuB046
Csa5G157230	Cucurbita pepo (Zucchini)	cpecuB174
Csa5G157230	Cucurbita pepo (Zucchini)	cpecuB736
Csa5G157230	Cucurbita pepo (Zucchini)	cpecuB872
Csa5G157230	Bottle gourd (USVL1VR-Ls)	culsiB322
Csa5G157230	Bottle gourd (USVL1VR-Ls)	culsiB376
Csa5G157230	Bottle gourd (USVL1VR-Ls)	culsiB386
Csa5G157230	Cucumber (Gy14) v2	cgybcuB128
Csa5G157230	Cucumber (Gy14) v2	cgybcuB129
Csa5G157230	Cucumber (Gy14) v2	cgybcuB224
Csa5G157230	Melon (DHL92) v3.6.1	cumedB389
Csa5G157230	Melon (DHL92) v3.6.1	cumedB390
Csa5G157230	Melon (DHL92) v3.6.1	cumedB391
Csa5G157230	Silver-seed gourd	carcuB0519
Csa5G157230	Silver-seed gourd	carcuB0882
Csa5G157230	Silver-seed gourd	carcuB0939
Csa5G157230	Silver-seed gourd	carcuB0954
Csa5G157230	Watermelon (97103) v2	cuwmbB336
Csa5G157230	Watermelon (97103) v2	cuwmbB356
Csa5G157230	Wax gourd	cuwgoB438
Csa5G157230	Cucumber (Chinese Long) v2	cucuB096
Csa5G157230	Cucumber (Chinese Long) v2	cucuB100
Csa5G157230	Cucumber (Chinese Long) v2	cucuB102
Csa5G157230	Cucumber (Gy14) v1	cgycuB368
Csa5G157230	Cucumber (Gy14) v1	cgycuB434
Csa5G157230	Cucumber (Gy14) v1	cgycuB461
Csa5G157230	Cucurbita maxima (Rimu)	cmacuB298
Csa5G157230	Cucurbita maxima (Rimu)	cmacuB608
Csa5G157230	Cucurbita maxima (Rimu)	cmacuB838
Csa5G157230	Cucurbita moschata (Rifu)	cmocuB286
Csa5G157230	Cucurbita moschata (Rifu)	cmocuB411
Csa5G157230	Cucurbita moschata (Rifu)	cmocuB598
Csa5G157230	Cucurbita moschata (Rifu)	cmocuB826