Csa5G139670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G139670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 3683819 .. 3685497 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTCAAAGAAACAGCATCAGCCATCAATGGCGGCAATTCCACCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATGTGGGTTTTCTCTTTCTCCTTCCATTTTTTCCTTTTTTCTTCTTCTTCTCTGTATGTGATGTTAACTGCTCTCTATTCACTAGTAAACAAAAATCTTTTGCAGCTGAGTTTTCATTTTCCTTCCTCTTTTGTCAGTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAAAAAAAATTTCTTTGTTTCGAGTTGTGTTGATGGAGATTGTTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAGTAAGAAGTAATTCTATAGCTAGGTTTCTTCTGTTCATATTGTTGCTTGTTTGACTACTGAGAAAATGAAGAATATAATCTTGATTTCAAGCCATTTAACTTTTGAAGTTGTTGTTCTTGTTTGGACTACAAAATGATATTGATTCACTTCAGTTTTCTTAATGCTCTGATTCATATGTGCATCTTGAGCATGCTTTGTTGAACTCTGGTCTATTGTTACTCCTTCTGTTTCAACTTCTTTTTCTTCTTTTTTCTGTTTCTAAACTTGTTTGGCCACTGACGAAATGGGAAGTAAAATTTCGACTGTCTCTTTTCTCACCATTTATTTGATTCATTTTTGCATCTTCAGCAAGTTTTGTTGAAGTTTGGGAGGATATTTGTGAGAAGTAAATCCTCTGCTACCCATTTGATTTCAGCTCCTTTTTTCTCACAGCTGTTTTTGAACCTGTTTGGCTACTGAGAAAAAGTAAAATCTAATTTGTAGTGATTTAGGCCAATTTGATCACCACTTAGTTTGTGAAAGTAAGACTATAAACACTAGTTCTACTTATTAGTTTCTCTTTTTTTTTGTTGTTGTCTACATTTTAAGAGTTTTCAAAAGATAAGCTTGGTTCTGAAAACTAAAAATGGTAGTTTTTTAGTTTTGAGAATCGTATTAAGAATTCAAATATTCACTCAAAAGAAAGATGTGAACTATGCTTAAAGTTGTGGAAAAAATAAAAAACCAAAAAGAGCTTAACATTTTTGGGAAACAAGTAGACTCGTAGCTAGAGTAATAAGTCCACAACTTTGCTATTTCAACTTGTTCTTTATTTTCCCTATCCTTTGCGTTTCTTTGTTCTGTTGTGTACTTTCTTAGTTGAACTTTTTTCGATAAATTGTTTCTATACAAAAGCGAAAAACATACAAAATAATTTATGGTGAAGCCAACATGAATTAGAAAAATGGAAACTTGAAATGAAATTGTCATTGAAGGAGACATTTTTTGTTCTTCTGAGTCTGACTGATTGAACCGATGATATGGGTTCACTTGGGTTTTATTTTGCTTTGAGTCTGTAGATTTAGATTACTATTTTTGCATCTTAAGCATGATTTTCTCAAGCCTGAAAGACTAGCAGTTAATACTAATAGTAAATTCGTTGCTAATCTTTCTTTTTTCTCTCCTCCCATCATTTCTGTACCTTTTGGCTATTGATATAATGGGAAGTAACCTCAATTCATTTCAGTATTATATGTCGCAAAGTATTGATTTTGATTCGTTCTCTTTAATTGCGGAAATCATGAAGATGCAACTAG

mRNA sequence

ATGGGCCTCAAAGAAACAGCATCAGCCATCAATGGCGGCAATTCCACCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAAAAAAAATTTCTTTGTTTCGAGTTGTGTTGATGGAGATTGTTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAATGCAACTAG

Coding sequence (CDS)

ATGGGCCTCAAAGAAACAGCATCAGCCATCAATGGCGGCAATTCCACCATTAAAATAGTAATTGAAGAAACCCCATTCATATCACATGGACCCTCCTCCTGTTCCTCTGGCGTTTTTGACCATTTTCTGATTTTCATCAATCAATGCAATGCAATCGACTGGGAATGCAAAAAAAATTTCTTTGTTTCGAGTTGTGTTGATGGAGATTGTTATTTTTGGATCTTGAGAAAGCTTCTGGGAAGTTTGAAATGCAACTAG

Protein sequence

MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNFFVSSCVDGDCYFWILRKLLGSLKCN*
Homology
[Close]
BLAST of Csa5G139670 vs. TrEMBL
Match: A0A0A0KLZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139670 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 9.3e-44
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF 60
          MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF
Sbjct: 1  MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF 60

Query: 61 FVSSCVDGDCYFWILRKLLGSLKCN 86
          FVSSCVDGDCYFWILRKLLGSLKCN
Sbjct: 61 FVSSCVDGDCYFWILRKLLGSLKCN 85

[Close]
BLAST of Csa5G139670 vs. NCBI nr
Match: gi|700194712|gb|KGN49889.1| (hypothetical protein Csa_5G139670 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF 60
          MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF
Sbjct: 1  MGLKETASAINGGNSTIKIVIEETPFISHGPSSCSSGVFDHFLIFINQCNAIDWECKKNF 60

Query: 61 FVSSCVDGDCYFWILRKLLGSLKCN 86
          FVSSCVDGDCYFWILRKLLGSLKCN
Sbjct: 61 FVSSCVDGDCYFWILRKLLGSLKCN 85

The following BLAST results are available for this feature:
BLAST of Csa5G139670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLZ8_CUCSA9.3e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139670 PE=4 SV=1[more]
BLAST of Csa5G139670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194712|gb|KGN49889.1|1.3e-43100.00hypothetical protein Csa_5G139670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G139670.1Csa5G139670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G139670Lsi09G000470Bottle gourd (USVL1VR-Ls)culsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G139670Watermelon (97103) v2cuwmbB336
Csa5G139670Watermelon (97103) v2cuwmbB381
Csa5G139670Watermelon (97103) v2cuwmbB384
Csa5G139670Wax gourdcuwgoB453
Csa5G139670Wax gourdcuwgoB481
Csa5G139670Cucumber (Chinese Long) v2cucuB095
Csa5G139670Cucumber (Chinese Long) v2cucuB142
Csa5G139670Cucumber (Gy14) v1cgycuB131
Csa5G139670Cucumber (Gy14) v1cgycuB309
Csa5G139670Cucumber (Gy14) v1cgycuB369
Csa5G139670Cucurbita maxima (Rimu)cmacuB292
Csa5G139670Cucurbita maxima (Rimu)cmacuB342
Csa5G139670Cucurbita maxima (Rimu)cmacuB419
Csa5G139670Cucurbita maxima (Rimu)cmacuB612
Csa5G139670Cucurbita moschata (Rifu)cmocuB251
Csa5G139670Cucurbita moschata (Rifu)cmocuB279
Csa5G139670Cucurbita moschata (Rifu)cmocuB329
Csa5G139670Cucurbita moschata (Rifu)cmocuB409
Csa5G139670Cucurbita moschata (Rifu)cmocuB603
Csa5G139670Melon (DHL92) v3.5.1cumeB357
Csa5G139670Melon (DHL92) v3.5.1cumeB402
Csa5G139670Melon (DHL92) v3.5.1cumeB406
Csa5G139670Melon (DHL92) v3.5.1cumeB408
Csa5G139670Watermelon (Charleston Gray)cuwcgB364
Csa5G139670Watermelon (Charleston Gray)cuwcgB392
Csa5G139670Watermelon (Charleston Gray)cuwcgB395
Csa5G139670Watermelon (97103) v1cuwmB397
Csa5G139670Watermelon (97103) v1cuwmB402
Csa5G139670Watermelon (97103) v1cuwmB408
Csa5G139670Cucurbita pepo (Zucchini)cpecuB043
Csa5G139670Cucurbita pepo (Zucchini)cpecuB188
Csa5G139670Cucurbita pepo (Zucchini)cpecuB225
Csa5G139670Cucurbita pepo (Zucchini)cpecuB622
Csa5G139670Cucurbita pepo (Zucchini)cpecuB730
Csa5G139670Bottle gourd (USVL1VR-Ls)culsiB377
Csa5G139670Bottle gourd (USVL1VR-Ls)culsiB378
Csa5G139670Cucumber (Gy14) v2cgybcuB125
Csa5G139670Cucumber (Gy14) v2cgybcuB183
Csa5G139670Cucumber (Gy14) v2cgybcuB224
Csa5G139670Melon (DHL92) v3.6.1cumedB336
Csa5G139670Melon (DHL92) v3.6.1cumedB386
Csa5G139670Melon (DHL92) v3.6.1cumedB392
Csa5G139670Melon (DHL92) v3.6.1cumedB395
Csa5G139670Silver-seed gourdcarcuB0327
Csa5G139670Silver-seed gourdcarcuB0536
Csa5G139670Silver-seed gourdcarcuB0570
Csa5G139670Silver-seed gourdcarcuB1005