Csa4G664230 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G664230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 23071779 .. 23072090 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCAGTGGAGAACAGACAATTCAACCATAGCAGTGAGAAGGAAGGCAGAGAAATGATGAGATGGTAGGTCTGTTGAGAAATTGGAGTCCTCGTTGAGAGGGATGAGGTGTGGTCTGTAGCGAGGGATCGAGCGAAGGTGGAGAAGTGGGAGAAGACAAGAAGCCGATTGCCAATATACCGAACAACAACAAAGGAAAGGAATAAAAAATGAAAGGAAAATTCAGGTAACCATAACCATTTCTACACACTAAATTCCTCTCTCAATCTCGCTGTCTTAGCAACCGGTAATAAGTAATATTACATCTTT

mRNA sequence

ATGATCCCAGTGGAGAACAGACAATTCAACCATAGCAGTGAGAAGGAAGGCAGAGAAATGATGAGATGCGAGGGATCGAGCGAAGGTGGAGAAGTGGGAGAAGACAAGAAGCCGATTGCCAATATACCGAACAACAACAAAGGAAAGGAATAA

Coding sequence (CDS)

ATGATCCCAGTGGAGAACAGACAATTCAACCATAGCAGTGAGAAGGAAGGCAGAGAAATGATGAGATGCGAGGGATCGAGCGAAGGTGGAGAAGTGGGAGAAGACAAGAAGCCGATTGCCAATATACCGAACAACAACAAAGGAAAGGAATAA

Protein sequence

MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE*
Homology
[Close]
BLAST of Csa4G664230 vs. TrEMBL
Match: A0A0A0L0S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664230 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.0e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE 51
          MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE
Sbjct: 1  MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE 50

[Close]
BLAST of Csa4G664230 vs. NCBI nr
Match: gi|700200357|gb|KGN55515.1| (hypothetical protein Csa_4G664230 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 7.2e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE 51
          MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE
Sbjct: 1  MIPVENRQFNHSSEKEGREMMRCEGSSEGGEVGEDKKPIANIPNNNKGKE 50

The following BLAST results are available for this feature:
BLAST of Csa4G664230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0S0_CUCSA5.0e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664230 PE=4 SV=1[more]
BLAST of Csa4G664230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200357|gb|KGN55515.1|7.2e-21100.00hypothetical protein Csa_4G664230 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G664230.1Csa4G664230.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G664230Cucurbita pepo (Zucchini)cpecuB787
Csa4G664230Bottle gourd (USVL1VR-Ls)culsiB284
Csa4G664230Cucumber (Gy14) v2cgybcuB166
Csa4G664230Melon (DHL92) v3.6.1cumedB298
Csa4G664230Silver-seed gourdcarcuB0113
Csa4G664230Silver-seed gourdcarcuB0388
Csa4G664230Watermelon (97103) v2cuwmbB280
Csa4G664230Wax gourdcuwgoB419
Csa4G664230Cucumber (Chinese Long) v2cucuB151
Csa4G664230Cucumber (Gy14) v1cgycuB387
Csa4G664230Cucurbita maxima (Rimu)cmacuB024
Csa4G664230Cucurbita maxima (Rimu)cmacuB464
Csa4G664230Cucurbita moschata (Rifu)cmocuB015
Csa4G664230Cucurbita moschata (Rifu)cmocuB452
Csa4G664230Melon (DHL92) v3.5.1cumeB313
Csa4G664230Watermelon (Charleston Gray)cuwcgB280
Csa4G664230Watermelon (97103) v1cuwmB350
Csa4G664230Cucurbita pepo (Zucchini)cpecuB572