Csa4G571230 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G571230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 18690600 .. 18690791 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

mRNA sequence

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

Coding sequence (CDS)

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

Protein sequence

MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASAQVG*
Homology
[Close]
BLAST of Csa4G571230 vs. TrEMBL
Match: A0A0A0L418_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571230 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

[Close]
BLAST of Csa4G571230 vs. NCBI nr
Match: gi|700199718|gb|KGN54876.1| (hypothetical protein Csa_4G571230 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

The following BLAST results are available for this feature:
BLAST of Csa4G571230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L418_CUCSA3.1e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571230 PE=4 SV=1[more]
BLAST of Csa4G571230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199718|gb|KGN54876.1|4.5e-28100.00hypothetical protein Csa_4G571230 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G571230.1Csa4G571230.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G571230CSPI04G20970Wild cucumber (PI 183967)cpicuB181
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G571230Cucumber (Gy14) v1cgycuB501
Csa4G571230Cucurbita maxima (Rimu)cmacuB670
Csa4G571230Cucurbita maxima (Rimu)cmacuB861
Csa4G571230Cucurbita moschata (Rifu)cmocuB658
Csa4G571230Cucurbita moschata (Rifu)cmocuB849
Csa4G571230Melon (DHL92) v3.5.1cumeB329
Csa4G571230Melon (DHL92) v3.5.1cumeB332
Csa4G571230Watermelon (Charleston Gray)cuwcgB303
Csa4G571230Watermelon (97103) v1cuwmB334
Csa4G571230Cucurbita pepo (Zucchini)cpecuB071
Csa4G571230Cucurbita pepo (Zucchini)cpecuB498
Csa4G571230Bottle gourd (USVL1VR-Ls)culsiB259
Csa4G571230Cucumber (Gy14) v2cgybcuB166
Csa4G571230Melon (DHL92) v3.6.1cumedB317
Csa4G571230Melon (DHL92) v3.6.1cumedB321
Csa4G571230Silver-seed gourdcarcuB0309
Csa4G571230Watermelon (97103) v2cuwmbB301
Csa4G571230Wax gourdcuwgoB404
Csa4G571230Wax gourdcuwgoB410