BLAST of Csa4G500330 vs. Swiss-Prot
Match:
CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)
HSP 1 Score: 660.6 bits (1703), Expect = 1.0e-188
Identity = 319/375 (85.07%), Postives = 347/375 (92.53%), Query Frame = 1
Query: 8 MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
M HQ SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTR
Sbjct: 6 MLQQHQP--SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTR 65
Query: 68 FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
FIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVK
Sbjct: 66 FIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVK 125
Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
SSLSA GFDVVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDP
Sbjct: 126 SSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDP 185
Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
KSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQ
Sbjct: 186 KSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQ 245
Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
I+QLGHVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYN
Sbjct: 246 ISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYN 305
Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
PKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEAD
Sbjct: 306 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEAD 365
Query: 368 FSTDDIILGKSLVLQ 383
F+TDD+IL K LVLQ
Sbjct: 366 FTTDDMILSKKLVLQ 378
BLAST of Csa4G500330 vs. Swiss-Prot
Match:
CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 1.2e-48
Identity = 129/370 (34.86%), Postives = 193/370 (52.16%), Query Frame = 1
Query: 16 TSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTA-SAKKNILIM----GGTRFIG 75
+SFS L SS S + + L ++ R++ K + ++ KKN+LI+ GG IG
Sbjct: 38 SSFSSLSSSSSS-SSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIG 97
Query: 76 IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
+ ++ L+ GH VT+ T G + ++ P ++ K + G+ + V +
Sbjct: 98 FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157
Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
+ FDVV D NG++ D V P++D ++QF++ SSAG+Y ++ PH E DAV
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217
Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
+ H + E LA NW S RP Y+ G N EEWFF R+ R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277
Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
Q+T + HV+DL++ + N + AS +FN ++ V+ DG+AK CA A G EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337
Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 375
Y+PK KK F FR+ HF+A AK +LGW+ + +L E L + + G +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397
BLAST of Csa4G500330 vs. Swiss-Prot
Match:
UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1
Query: 57 KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
+K ILI GG F+G L+ L+ +GH+VT+ FT K V + E+ E
Sbjct: 88 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147
Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
Y + +I HL +++ + + + + +N ++ ++ +
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207
Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
+ S++ VY ++ P E V+ + P++ + +GK E++ + + V R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267
Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
+GP +N V F + G P+ + SG Q +V DL N V ++ ++
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327
Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
+S + N + F L K +G EI + + D K+KP
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387
Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
I+KAK +LGW+P L EGL + + FRKE ++ ++ + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
BLAST of Csa4G500330 vs. Swiss-Prot
Match:
UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1
Query: 57 KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
+K ILI GG F+G L+ L+ +GH+VT+ FT K V + E+ E
Sbjct: 88 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147
Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
Y + +I HL +++ + + + + +N ++ ++ +
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207
Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
+ S++ VY ++ P E V+ + P++ + +GK E++ + + V R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267
Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
+GP +N V F + G P+ + SG Q +V DL N V ++ ++
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327
Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
+S + N + F L K +G EI + + D K+KP
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387
Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
I+KAK +LGW+P L EGL + + FRKE ++ ++ + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
BLAST of Csa4G500330 vs. Swiss-Prot
Match:
UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1
Query: 57 KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
+K ILI GG F+G L+ L+ +GH+VT+ FT K V + E+ E
Sbjct: 88 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147
Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
Y + +I HL +++ + + + + +N ++ ++ +
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207
Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
+ S++ VY ++ P E V+ + P++ + +GK E++ + + V R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267
Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
+GP +N V F + G P+ + SG Q +V DL N V ++ ++
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327
Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
+S + N + F L K +G EI + + D K+KP
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387
Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
I+KAK +LGW+P L EGL + + FRKE ++ ++ + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
BLAST of Csa4G500330 vs. TrEMBL
Match:
V4TB37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1)
HSP 1 Score: 671.8 bits (1732), Expect = 5.0e-190
Identity = 322/380 (84.74%), Postives = 351/380 (92.37%), Query Frame = 1
Query: 4 MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
MA+ + HQ SFS L SSLSDFNG R+H+Q+QY+RKV+QPK GL +TAS++KNILIM
Sbjct: 1 MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQYRRKVLQPKVGLQITASSEKNILIM 60
Query: 64 GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+ QQLPGES+ ++A+F SKILHLKGDRKD+
Sbjct: 61 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 120
Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
DFVKSSLSA GFDVVYDINGREADEVEPI+DALP LEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 180
Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
VDPKSRHKGKL TES+L SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 240
Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
SGIQ+TQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKA GFPEPE+
Sbjct: 241 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 300
Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGLADSYNLDFGRGT+R
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYR 360
Query: 364 KEADFSTDDIILGKSLVLQA 384
KEADFSTDD+ILGK LVLQA
Sbjct: 361 KEADFSTDDMILGKKLVLQA 380
BLAST of Csa4G500330 vs. TrEMBL
Match:
W9REG7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1)
HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 326/380 (85.79%), Postives = 349/380 (91.84%), Query Frame = 1
Query: 4 MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
MA M Q T S+LPSSLSDFNG +LHAQVQ+K++ QPKG L VTAS+ K ILIM
Sbjct: 1 MARLMVVQQQHKTPLSLLPSSLSDFNGTKLHAQVQFKKRDSQPKGALQVTASSTKKILIM 60
Query: 64 GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP++QQLPGES+ADY DF SKILHLKGDRKD
Sbjct: 61 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDADYTDFSSKILHLKGDRKDS 120
Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
D VKS LSA GFDVVYDINGREADEV PI+DALP LEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 DVVKSGLSAEGFDVVYDINGREADEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFETD 180
Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
AVDPKSRHKGKLETESLLA + VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLALRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240
Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
SGIQITQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPEI
Sbjct: 241 SGIQITQLGHVKDLARAFVQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEI 300
Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
+HYNPKEFDFGKKK FPFRDQHFFAS+EKAKSVLG+KPEFDLVEGLADSY LDFGRGT+R
Sbjct: 301 IHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGFKPEFDLVEGLADSYILDFGRGTYR 360
Query: 364 KEADFSTDDIILGKSLVLQA 384
KEADFSTDDIILGKSLVLQ+
Sbjct: 361 KEADFSTDDIILGKSLVLQS 380
BLAST of Csa4G500330 vs. TrEMBL
Match:
V4T121_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1)
HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 322/381 (84.51%), Postives = 351/381 (92.13%), Query Frame = 1
Query: 4 MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQ-YKRKVMQPKGGLHVTASAKKNILI 63
MA+ + HQ SFS L SSLSDFNG R+H+Q+Q Y+RKV+QPK GL +TAS++KNILI
Sbjct: 1 MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQQYRRKVLQPKVGLQITASSEKNILI 60
Query: 64 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 123
MGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+ QQLPGES+ ++A+F SKILHLKGDRKD
Sbjct: 61 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 120
Query: 124 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 183
+DFVKSSLSA GFDVVYDINGREADEVEPI+DALP LEQFIYCSSAGVYLKSDLLPH E
Sbjct: 121 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 180
Query: 184 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 243
D VDPKSRHKGKL TES+L SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 244 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 303
SGIQ+TQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKA GFPEPE
Sbjct: 241 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 300
Query: 304 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 363
+VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGLADSYNLDFGRGT+
Sbjct: 301 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 360
Query: 364 RKEADFSTDDIILGKSLVLQA 384
RKEADFSTDD+ILGK LVLQA
Sbjct: 361 RKEADFSTDDMILGKKLVLQA 381
BLAST of Csa4G500330 vs. TrEMBL
Match:
A0A068VK15_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1)
HSP 1 Score: 666.8 bits (1719), Expect = 1.6e-188
Identity = 323/374 (86.36%), Postives = 347/374 (92.78%), Query Frame = 1
Query: 8 MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
MAA K SFSVLPSSLSDFNG RL VQYKRKV+ P+G LHV+ASA K ILIMGGTR
Sbjct: 4 MAAVQAKQPSFSVLPSSLSDFNGIRLTTSVQYKRKVLHPRGALHVSASAAKKILIMGGTR 63
Query: 68 FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
FIGIFLSR LVKEGHQVTLFTRGKAP+ QQLPGES+ D+ADF SKILHLKGDRKDF+FVK
Sbjct: 64 FIGIFLSRFLVKEGHQVTLFTRGKAPIAQQLPGESDTDFADFSSKILHLKGDRKDFEFVK 123
Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
SSL+A GFDVVYDINGREA E EPI+DALP LEQ+IYCSSAGVYLKSD LPHFE+DAVDP
Sbjct: 124 SSLAAEGFDVVYDINGREAAEAEPILDALPNLEQYIYCSSAGVYLKSDYLPHFEIDAVDP 183
Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
KSRHKGKLETESLL ++ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG+Q
Sbjct: 184 KSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGMQ 243
Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
+TQLGHVKDLA AFV+VLGN+KAS++VFNISGEKYV+FDGLAKACAKA GFPEPEI+H+N
Sbjct: 244 VTQLGHVKDLATAFVKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPEIIHFN 303
Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF LVEGLADSYNLDFGRGT+RKEAD
Sbjct: 304 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFALVEGLADSYNLDFGRGTYRKEAD 363
Query: 368 FSTDDIILGKSLVL 382
FSTDDIILGKSLVL
Sbjct: 364 FSTDDIILGKSLVL 377
BLAST of Csa4G500330 vs. TrEMBL
Match:
V4KDW6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007937mg PE=4 SV=1)
HSP 1 Score: 665.2 bits (1715), Expect = 4.7e-188
Identity = 320/371 (86.25%), Postives = 349/371 (94.07%), Query Frame = 1
Query: 13 QKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIF 72
Q SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTRFIG+F
Sbjct: 9 QSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVF 68
Query: 73 LSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSA 132
LSRLLVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVKSSLSA
Sbjct: 69 LSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSA 128
Query: 133 AGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHK 192
GFDVVYDINGREA+EVEPIIDALPKLEQ+IYCSSAGVYLKSD+LPH EVDAVDPKSRHK
Sbjct: 129 EGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHK 188
Query: 193 GKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLG 252
GKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLG
Sbjct: 189 GKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLG 248
Query: 253 HVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFD 312
HVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLA+ACAKAGGFPEPEIVHYNPKEFD
Sbjct: 249 HVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFD 308
Query: 313 FGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDD 372
FGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEADF+TDD
Sbjct: 309 FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDD 368
Query: 373 IILGKSLVLQA 384
+IL K LVLQ+
Sbjct: 369 MILSKKLVLQS 379
BLAST of Csa4G500330 vs. TAIR10
Match:
AT1G09340.1 (AT1G09340.1 chloroplast RNA binding)
HSP 1 Score: 660.6 bits (1703), Expect = 5.9e-190
Identity = 319/375 (85.07%), Postives = 347/375 (92.53%), Query Frame = 1
Query: 8 MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
M HQ SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTR
Sbjct: 6 MLQQHQP--SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTR 65
Query: 68 FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
FIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVK
Sbjct: 66 FIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVK 125
Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
SSLSA GFDVVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDP
Sbjct: 126 SSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDP 185
Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
KSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQ
Sbjct: 186 KSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQ 245
Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
I+QLGHVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYN
Sbjct: 246 ISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYN 305
Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
PKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEAD
Sbjct: 306 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEAD 365
Query: 368 FSTDDIILGKSLVLQ 383
F+TDD+IL K LVLQ
Sbjct: 366 FTTDDMILSKKLVLQ 378
BLAST of Csa4G500330 vs. TAIR10
Match:
AT3G63140.1 (AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa)
HSP 1 Score: 195.3 bits (495), Expect = 7.0e-50
Identity = 129/370 (34.86%), Postives = 193/370 (52.16%), Query Frame = 1
Query: 16 TSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTA-SAKKNILIM----GGTRFIG 75
+SFS L SS S + + L ++ R++ K + ++ KKN+LI+ GG IG
Sbjct: 38 SSFSSLSSSSSS-SSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIG 97
Query: 76 IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
+ ++ L+ GH VT+ T G + ++ P ++ K + G+ + V +
Sbjct: 98 FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157
Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
+ FDVV D NG++ D V P++D ++QF++ SSAG+Y ++ PH E DAV
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217
Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
+ H + E LA NW S RP Y+ G N EEWFF R+ R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277
Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
Q+T + HV+DL++ + N + AS +FN ++ V+ DG+AK CA A G EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337
Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 375
Y+PK KK F FR+ HF+A AK +LGW+ + +L E L + + G +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397
BLAST of Csa4G500330 vs. NCBI nr
Match:
gi|449457309|ref|XP_004146391.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus])
HSP 1 Score: 774.2 bits (1998), Expect = 1.0e-220
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1
Query: 1 MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1 MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
Query: 61 LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61 LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383
BLAST of Csa4G500330 vs. NCBI nr
Match:
gi|659082960|ref|XP_008442117.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo])
HSP 1 Score: 766.1 bits (1977), Expect = 2.8e-218
Identity = 378/383 (98.69%), Postives = 381/383 (99.48%), Query Frame = 1
Query: 1 MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1 MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
Query: 61 LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61 LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180
Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300
Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383
BLAST of Csa4G500330 vs. NCBI nr
Match:
gi|1009116591|ref|XP_015874856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 682.6 bits (1760), Expect = 4.1e-193
Identity = 330/370 (89.19%), Postives = 349/370 (94.32%), Query Frame = 1
Query: 14 KFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFL 73
K SFS+LPSSLSDFNG RL Q+QYK+KV QPKG LHVTAS+KK ILIMGGTRFIG+FL
Sbjct: 12 KHPSFSLLPSSLSDFNGIRLQTQLQYKKKVYQPKGALHVTASSKKKILIMGGTRFIGVFL 71
Query: 74 SRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAA 133
SRLLVK+GHQVTLFTRGKAP+T+QLPGES+ DY DF SKILHLKGDRKDFDFVKSSLSA
Sbjct: 72 SRLLVKDGHQVTLFTRGKAPITKQLPGESDKDYTDFSSKILHLKGDRKDFDFVKSSLSAE 131
Query: 134 GFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKG 193
GFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHFE DAVDPKSRHKG
Sbjct: 132 GFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFETDAVDPKSRHKG 191
Query: 194 KLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH 253
KLETESLL S+DVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH
Sbjct: 192 KLETESLLKSRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH 251
Query: 254 VKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDF 313
VKDLA F VLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPEI+HYNPKEFDF
Sbjct: 252 VKDLAKVFADVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKEFDF 311
Query: 314 GKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDI 373
GKKK FPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGT+RKEADF TDDI
Sbjct: 312 GKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFETDDI 371
Query: 374 ILGKSLVLQA 384
ILGKSLVLQ+
Sbjct: 372 ILGKSLVLQS 381
BLAST of Csa4G500330 vs. NCBI nr
Match:
gi|802755325|ref|XP_012088856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jatropha curcas])
HSP 1 Score: 682.2 bits (1759), Expect = 5.3e-193
Identity = 334/380 (87.89%), Postives = 352/380 (92.63%), Query Frame = 1
Query: 4 MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
MA +A Q SFS+LPSS SDFNG RLH+Q+Q KRKV Q KG L VTAS KNILIM
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTKGALQVTASTSKNILIM 60
Query: 64 GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ +YADF SKILHLKGDRKDF
Sbjct: 61 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDF 120
Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
+FVKSSLSA GFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 EFVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETD 180
Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
AVDPKSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240
Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
SG+QITQLGHVKDLA AF+QVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPE+
Sbjct: 241 SGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEL 300
Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
VHYNPKEFDFGKKK FPFRDQHFFASIEKAK VLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFR 360
Query: 364 KEADFSTDDIILGKSLVLQA 384
KEADFSTDD+ILGKSLVLQA
Sbjct: 361 KEADFSTDDLILGKSLVLQA 380
BLAST of Csa4G500330 vs. NCBI nr
Match:
gi|747089109|ref|XP_011092178.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Sesamum indicum])
HSP 1 Score: 673.3 bits (1736), Expect = 2.5e-190
Identity = 329/381 (86.35%), Postives = 356/381 (93.44%), Query Frame = 1
Query: 4 MANPMAAHHQKFTSFSVL-PSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILI 63
MA+ + HH++ +S S+L SSLSDFNGARL A VQYKRK+ QPKG L VTAS+ K ILI
Sbjct: 1 MASMVVVHHKQPSSTSILLSSSLSDFNGARLTASVQYKRKLWQPKGALRVTASSTKKILI 60
Query: 64 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 123
MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESEAD+ADF SKILHLKGDRKD
Sbjct: 61 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILHLKGDRKD 120
Query: 124 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 183
F+FVKSSL+A GFDVVYDINGREA EVEPI++ALP LEQ+IYCSSAGVYLKSD PHFE+
Sbjct: 121 FEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSDYPPHFEI 180
Query: 184 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 243
DAVDPKSRHKGKLETESLL S+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 244 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 303
NSG+Q+TQLGHVKDLA AF++VLGN+KAS++VFNISGEKYV+FDGLAKACAKA GFPEPE
Sbjct: 241 NSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKAAGFPEPE 300
Query: 304 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 363
IVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360
Query: 364 RKEADFSTDDIILGKSLVLQA 384
RKEADFSTDDIILGKSLVLQ+
Sbjct: 361 RKEADFSTDDIILGKSLVLQS 381
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
CP41B_ARATH | 1.0e-188 | 85.07 | Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ... | [more] |
CP41A_ARATH | 1.2e-48 | 34.86 | Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ... | [more] |
UXS1_RAT | 3.6e-08 | 23.21 | UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1 | [more] |
UXS1_PONAB | 3.6e-08 | 23.21 | UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1 | [more] |
UXS1_MOUSE | 3.6e-08 | 23.21 | UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
V4TB37_9ROSI | 5.0e-190 | 84.74 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1 | [more] |
W9REG7_9ROSA | 1.2e-188 | 85.79 | Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1 | [more] |
V4T121_9ROSI | 1.2e-188 | 84.51 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1 | [more] |
A0A068VK15_COFCA | 1.6e-188 | 86.36 | Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1 | [more] |
V4KDW6_EUTSA | 4.7e-188 | 86.25 | Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007937mg PE=4 SV=1 | [more] |