Csa4G500330 (gene) Cucumber (Chinese Long) v2

NameCsa4G500330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNAD dependent epimerase/dehydratase, putative; contains IPR016040 (NAD(P)-binding domain)
LocationChr4 : 17487961 .. 17491527 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCGATTTCTTTTTTCGATTTTGGGTTTTAGATTCGATAAATTTTAATTGAGAGGTGGAGGCAAATCACTGTCTTATCCTCAAAACATTAGAATGAAATCCAGCCAGAGAATGAGTAGCCATGTCCTTAGAAGAACAACCCTTCAAATCCATTCCCTTTTTAATCCCACCACCAAACAGGAAGACGAAGGGTTTCTAAATGGGGATCATGGCAAACCCAATGGCTGCTCACCACCAAAAGTTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAAGTTCAGGTCTATTTCTCGTTTCTTTTCTCCTACCTATCTTTCTCTTTTGGGTTTTGCTTTTATCTCTTCAATTTTGATTCAATCTGGATATTATTTGAGCGGTTCTTGTTGTTAAAGCCTAAAAATCAGTGCACATTGAACTGGGTTTCCCCTTAAGTGGCCATATTGCTATATGCGAGTTTCTTTTCCCTCCGTTTTGATTGATTCATATATGTTGTTTGCCACTAAACACAAAAGCTTAGAAGAAATAGGATACATCGACTATTAATTGGATTAAAAAAACTCATTCAACATGAAAGCTGTTAACATGAATTTGAGGGTGAGTGTGGTTTCGGAACATTCTGCGTTGATGCTATGTTAATTACGAAAGCTTTGAAATATAAGTTTGATTCATGAAGCCTGATTAGCATGTGCGCTGCTAAAAATGAATAAGTGGGGAAATGAGGTTTCAAATATGAGTTTTTTTTTTTAACCTGATACTGTGTTAAATTACATTACGTTGGGAAGTGTAGGCTGATTGATTATGGTGCATTTAGTGCTTTATATGTTTTCTCAATGTGGTTTGGCCTTGGATTGCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTTTTGCCATTCTCTTTCTTCTTTCTCTGGTTGCTGCAGATTCCCCATTAGAAGATTCATGGGATTTGCTAATTTTGGCAGGTAACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCTGATTTTAAATCCAAGGTCATCTAAGCTTCCATTTAAGCCTTAAAACTCTTGTGAACTTTCATAAAGAGAAATGTGGTACCATGGTTTTATTTTTAAGCATATTACTTGTGAATTTGTTGGAGTACAGATGCTAAATTTGTCTATTTGATTCTCATTTCTCAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGTGAGTCTGATTTCGGATCGATCACTTCTGGTTTTAAACTTTCACCCTGATTTGTTTTAAAACCGTCATATCCAATAGTTTTTTTGGTCTACACACTGCTACATGATTTCAGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTAAGATTTCCTAAATAATATCTGCTTTCTTTTCACAGCAATTGTTGTTAGTCATGTGCATCATGTTTTCCAATGCTAGAGGGAACAATTTTGATTTACAAAAATGATTTTGTGCCATTGGTGATACGGGATTGGTTTGTTGTGTTTCTGTGGGTGAAAGTATTCAGATTGTTCGACTTGAATTCGGAAACGTTGCCTGCATTGTTAATTTTATGAAGGTATAGAAGATATATTATTCACCTGTCAAGGTAAATTTAGGTGTTTCAAGGAATCAAAGGTCATATATTCAAATCATAGTGATGATCCAGTGGAAATATTAAATGTTCTACAAGTTTTCCAAACTGAAATGTTACATTATAAGATAACTGTCCTATGAAATCAGTAAAGTAAGTAAGCTAGTCTAAATATTACAATTCACAAAAATTTGCATAAAGAACCATGAAACAGAATATAGATTTTGCGGAGTTCGATAAAATGTGATGTATCTAATTATTCTCAGGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTACCTTTTCTTTCCTTATAAACAAAAGCTTTCAGATTACTTTCTTTGTCCAATACCAAAATAATTGGTTTACTCAAAGTTTGACCTCCACTTCTCTTTCATTTCGTAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCGGGCATTCAAATTACACAACTTGGTCACGTCAAGGTCTGTGCTGTTAAGGTCATTTAGTGCAATAGGAACAAATCGTTAAGTCTGTTGTAGGTAGCAGGCCAATAGAGATCCTTTGATGTGAATAGCCTGGGAAAAGGATTATAGTTTAAAACATTTCTTGATGTTAATGTAGCAATTGAGATCAAGTTAATAATTGAACCTTTTTTGTCAACTGCAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCTGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCCAAGGTAATCTCTTGAAGAAATAATCAGGACACCGTAGTATTCATCATTGAGATAACATCTGAATTGGCTTCTCTCTCCTGTAATAAACTTTACAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGGTAATCTGGTGGATATAATGATAAATATGATGCAGTTTGCTGGAATTTGATGGCTGAAATAGCACCATTGTTAATATAAATGTCATGCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGCTGGAAGCCCGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGAGGCATCCTTTTTCATTTTTTTTTCTTGGCTGTTTTAACTCATTCTCTACCGATCTGCAGGGGTTAGTCGACCGATCCCGGGTTGAGAAGTCAATTTAGGAATGTTATTTATGTATATGTATGAGATGGAGGTTTTTAGAGAAGCATTAGAACTAGGCCTTGTCAATTCATTAGAGGCCTTCTTCACTCAAGCATAGATAAAGTCAAATGTTTATGTATGATATGAAAAATGCAGTATAAATGATGTCATTTGTTTCTTGTTTATTTGCTCATATTTTCGTAGCTTTTTAATCATATATCAAACTCAATGTTGGATAATGTTGTTGAGC

mRNA sequence

ATGGGGATCATGGCAAACCCAATGGCTGCTCACCACCAAAAGTTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTAACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCGGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCTGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCCAAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGCTGGAAGCCCGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGA

Coding sequence (CDS)

ATGGGGATCATGGCAAACCCAATGGCTGCTCACCACCAAAAGTTTACTTCATTCTCTGTTCTTCCTTCTTCTCTTTCCGATTTCAATGGCGCCAGACTCCACGCCCAAGTTCAGTATAAAAGGAAGGTTATGCAGCCAAAAGGAGGATTACATGTTACAGCAAGTGCCAAAAAGAACATTCTTATAATGGGTGGCACCAGATTTATTGGTATATTCTTGTCTAGACTTCTAGTCAAAGAGGGTCATCAGGTAACTTTGTTTACAAGAGGAAAAGCACCTGTTACACAACAATTGCCGGGCGAGTCGGAAGCAGATTATGCTGATTTTAAATCCAAGATTCTGCATTTGAAGGGAGACAGAAAAGACTTTGATTTTGTTAAATCCAGTCTCTCGGCCGCGGGGTTTGATGTAGTTTACGACATTAATGGGCGAGAAGCAGATGAAGTTGAACCAATTATAGATGCTTTGCCTAAGCTAGAGCAGTTTATTTACTGCTCTTCAGCTGGTGTATACCTCAAGTCTGATCTCCTACCTCATTTTGAGGTAGATGCAGTTGATCCAAAGAGTAGACATAAGGGAAAGCTTGAGACAGAGAGCTTACTGGCGTCGAAGGATGTTAATTGGACTTCTATAAGACCAGTCTACATCTATGGACCATTGAACTACAATCCTGTGGAAGAATGGTTCTTCCACCGATTGAAAGCCGGTCGCCCCATTCCAATTCCCAACTCGGGCATTCAAATTACACAACTTGGTCACGTCAAGGATTTGGCAAATGCTTTTGTTCAGGTTCTTGGTAATGACAAGGCAAGCCAGCAAGTATTCAATATTTCTGGTGAAAAATATGTTTCATTTGATGGGTTAGCCAAAGCTTGTGCCAAGGCTGGAGGCTTTCCTGAGCCCGAGATTGTTCACTACAATCCGAAGGAGTTTGACTTTGGAAAGAAGAAGCCATTCCCTTTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCGAAGAGCGTGCTCGGCTGGAAGCCCGAATTTGATTTGGTGGAAGGTCTTGCAGACTCCTACAATTTGGACTTTGGCAGAGGCACTTTCAGAAAAGAGGCTGATTTTTCAACAGATGACATAATCCTTGGCAAGAGCCTGGTTCTTCAAGCTTGA

Protein sequence

MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQA*
BLAST of Csa4G500330 vs. Swiss-Prot
Match: CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 1.0e-188
Identity = 319/375 (85.07%), Postives = 347/375 (92.53%), Query Frame = 1

Query: 8   MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
           M   HQ   SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTR
Sbjct: 6   MLQQHQP--SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTR 65

Query: 68  FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
           FIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVK
Sbjct: 66  FIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVK 125

Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
           SSLSA GFDVVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDP
Sbjct: 126 SSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDP 185

Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
           KSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQ
Sbjct: 186 KSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQ 245

Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
           I+QLGHVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYN
Sbjct: 246 ISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYN 305

Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
           PKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEAD
Sbjct: 306 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEAD 365

Query: 368 FSTDDIILGKSLVLQ 383
           F+TDD+IL K LVLQ
Sbjct: 366 FTTDDMILSKKLVLQ 378

BLAST of Csa4G500330 vs. Swiss-Prot
Match: CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-48
Identity = 129/370 (34.86%), Postives = 193/370 (52.16%), Query Frame = 1

Query: 16  TSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTA-SAKKNILIM----GGTRFIG 75
           +SFS L SS S  + + L   ++  R++   K  +  ++   KKN+LI+    GG   IG
Sbjct: 38  SSFSSLSSSSSS-SSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIG 97

Query: 76  IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
            + ++ L+  GH VT+ T G   +   ++ P    ++      K +   G+  +   V +
Sbjct: 98  FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157

Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
            +    FDVV D NG++ D V P++D      ++QF++ SSAG+Y  ++  PH E DAV 
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217

Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
             + H   +  E  LA    NW S RP Y+ G  N    EEWFF R+   R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277

Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
           Q+T + HV+DL++     + N + AS  +FN   ++ V+ DG+AK CA A G    EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337

Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 375
           Y+PK      KK F FR+ HF+A    AK +LGW+ + +L E L + +      G  +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397

BLAST of Csa4G500330 vs. Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

BLAST of Csa4G500330 vs. Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

BLAST of Csa4G500330 vs. Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 81/349 (23.21%), Postives = 145/349 (41.55%), Query Frame = 1

Query: 57  KKNILIMGGTRFIGIFLSRLLVKEGHQVTL----FTRGKAPVTQQLPGES---------E 116
           +K ILI GG  F+G  L+  L+ +GH+VT+    FT  K  V   +  E+         E
Sbjct: 88  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 147

Query: 117 ADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKL-EQF 176
             Y +   +I HL       +++ + +     + +  +N         ++    ++  + 
Sbjct: 148 PLYIEV-DQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARL 207

Query: 177 IYCSSAGVYLKSDLLPHFE-----VDAVDPKSRH-KGKLETESL----LASKDVNWTSIR 236
           +  S++ VY   ++ P  E     V+ + P++ + +GK   E++    +  + V     R
Sbjct: 208 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 267

Query: 237 PVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGNDK 296
               +GP   +N   V   F  +   G P+ +  SG Q     +V DL N  V ++ ++ 
Sbjct: 268 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 327

Query: 297 ASQ-QVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFA 356
           +S   + N      + F  L K    +G     EI   +  + D  K+KP          
Sbjct: 328 SSPVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRKP---------- 387

Query: 357 SIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGK 378
            I+KAK +LGW+P   L EGL  + +       FRKE ++  ++  + K
Sbjct: 388 DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406

BLAST of Csa4G500330 vs. TrEMBL
Match: V4TB37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 5.0e-190
Identity = 322/380 (84.74%), Postives = 351/380 (92.37%), Query Frame = 1

Query: 4   MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
           MA+ +   HQ   SFS L SSLSDFNG R+H+Q+QY+RKV+QPK GL +TAS++KNILIM
Sbjct: 1   MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQYRRKVLQPKVGLQITASSEKNILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+ QQLPGES+ ++A+F SKILHLKGDRKD+
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 120

Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           DFVKSSLSA GFDVVYDINGREADEVEPI+DALP LEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 180

Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
            VDPKSRHKGKL TES+L SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 
Sbjct: 181 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 240

Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
           SGIQ+TQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKA GFPEPE+
Sbjct: 241 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGLADSYNLDFGRGT+R
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           KEADFSTDD+ILGK LVLQA
Sbjct: 361 KEADFSTDDMILGKKLVLQA 380

BLAST of Csa4G500330 vs. TrEMBL
Match: W9REG7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 326/380 (85.79%), Postives = 349/380 (91.84%), Query Frame = 1

Query: 4   MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
           MA  M    Q  T  S+LPSSLSDFNG +LHAQVQ+K++  QPKG L VTAS+ K ILIM
Sbjct: 1   MARLMVVQQQHKTPLSLLPSSLSDFNGTKLHAQVQFKKRDSQPKGALQVTASSTKKILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP++QQLPGES+ADY DF SKILHLKGDRKD 
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDADYTDFSSKILHLKGDRKDS 120

Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           D VKS LSA GFDVVYDINGREADEV PI+DALP LEQ+IYCSSAGVYLKSDLLPHFE D
Sbjct: 121 DVVKSGLSAEGFDVVYDINGREADEVAPILDALPNLEQYIYCSSAGVYLKSDLLPHFETD 180

Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLLA + VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLALRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
           SGIQITQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPEI
Sbjct: 241 SGIQITQLGHVKDLARAFVQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEI 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           +HYNPKEFDFGKKK FPFRDQHFFAS+EKAKSVLG+KPEFDLVEGLADSY LDFGRGT+R
Sbjct: 301 IHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGFKPEFDLVEGLADSYILDFGRGTYR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           KEADFSTDDIILGKSLVLQ+
Sbjct: 361 KEADFSTDDIILGKSLVLQS 380

BLAST of Csa4G500330 vs. TrEMBL
Match: V4T121_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 322/381 (84.51%), Postives = 351/381 (92.13%), Query Frame = 1

Query: 4   MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQ-YKRKVMQPKGGLHVTASAKKNILI 63
           MA+ +   HQ   SFS L SSLSDFNG R+H+Q+Q Y+RKV+QPK GL +TAS++KNILI
Sbjct: 1   MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQQYRRKVLQPKVGLQITASSEKNILI 60

Query: 64  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 123
           MGGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+ QQLPGES+ ++A+F SKILHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 120

Query: 124 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 183
           +DFVKSSLSA GFDVVYDINGREADEVEPI+DALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 180

Query: 184 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 243
           D VDPKSRHKGKL TES+L SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 244 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 303
            SGIQ+TQLGHVKDLA AFVQVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKA GFPEPE
Sbjct: 241 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 300

Query: 304 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 363
           +VHYNPKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGLADSYNLDFGRGT+
Sbjct: 301 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 360

Query: 364 RKEADFSTDDIILGKSLVLQA 384
           RKEADFSTDD+ILGK LVLQA
Sbjct: 361 RKEADFSTDDMILGKKLVLQA 381

BLAST of Csa4G500330 vs. TrEMBL
Match: A0A068VK15_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 1.6e-188
Identity = 323/374 (86.36%), Postives = 347/374 (92.78%), Query Frame = 1

Query: 8   MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
           MAA   K  SFSVLPSSLSDFNG RL   VQYKRKV+ P+G LHV+ASA K ILIMGGTR
Sbjct: 4   MAAVQAKQPSFSVLPSSLSDFNGIRLTTSVQYKRKVLHPRGALHVSASAAKKILIMGGTR 63

Query: 68  FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
           FIGIFLSR LVKEGHQVTLFTRGKAP+ QQLPGES+ D+ADF SKILHLKGDRKDF+FVK
Sbjct: 64  FIGIFLSRFLVKEGHQVTLFTRGKAPIAQQLPGESDTDFADFSSKILHLKGDRKDFEFVK 123

Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
           SSL+A GFDVVYDINGREA E EPI+DALP LEQ+IYCSSAGVYLKSD LPHFE+DAVDP
Sbjct: 124 SSLAAEGFDVVYDINGREAAEAEPILDALPNLEQYIYCSSAGVYLKSDYLPHFEIDAVDP 183

Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
           KSRHKGKLETESLL ++ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG+Q
Sbjct: 184 KSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGMQ 243

Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
           +TQLGHVKDLA AFV+VLGN+KAS++VFNISGEKYV+FDGLAKACAKA GFPEPEI+H+N
Sbjct: 244 VTQLGHVKDLATAFVKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPEIIHFN 303

Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
           PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEF LVEGLADSYNLDFGRGT+RKEAD
Sbjct: 304 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFALVEGLADSYNLDFGRGTYRKEAD 363

Query: 368 FSTDDIILGKSLVL 382
           FSTDDIILGKSLVL
Sbjct: 364 FSTDDIILGKSLVL 377

BLAST of Csa4G500330 vs. TrEMBL
Match: V4KDW6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007937mg PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 4.7e-188
Identity = 320/371 (86.25%), Postives = 349/371 (94.07%), Query Frame = 1

Query: 13  QKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIF 72
           Q   SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTRFIG+F
Sbjct: 9   QSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGVF 68

Query: 73  LSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSA 132
           LSRLLVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVKSSLSA
Sbjct: 69  LSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSA 128

Query: 133 AGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHK 192
            GFDVVYDINGREA+EVEPIIDALPKLEQ+IYCSSAGVYLKSD+LPH EVDAVDPKSRHK
Sbjct: 129 EGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHK 188

Query: 193 GKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLG 252
           GKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLG
Sbjct: 189 GKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLG 248

Query: 253 HVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFD 312
           HVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLA+ACAKAGGFPEPEIVHYNPKEFD
Sbjct: 249 HVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFD 308

Query: 313 FGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDD 372
           FGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEADF+TDD
Sbjct: 309 FGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDD 368

Query: 373 IILGKSLVLQA 384
           +IL K LVLQ+
Sbjct: 369 MILSKKLVLQS 379

BLAST of Csa4G500330 vs. TAIR10
Match: AT1G09340.1 (AT1G09340.1 chloroplast RNA binding)

HSP 1 Score: 660.6 bits (1703), Expect = 5.9e-190
Identity = 319/375 (85.07%), Postives = 347/375 (92.53%), Query Frame = 1

Query: 8   MAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTR 67
           M   HQ   SFS+L SSLSDFNGA+LH QVQYKRKV QPKG L+V+AS++K ILIMGGTR
Sbjct: 6   MLQQHQP--SFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTR 65

Query: 68  FIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVK 127
           FIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGES+ D+ADF SKILHLKGDRKD+DFVK
Sbjct: 66  FIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVK 125

Query: 128 SSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDP 187
           SSLSA GFDVVYDINGREA+EVEPI++ALPKLEQ+IYCSSAGVYLKSD+LPH E DAVDP
Sbjct: 126 SSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDP 185

Query: 188 KSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ 247
           KSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQ
Sbjct: 186 KSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQ 245

Query: 248 ITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYN 307
           I+QLGHVKDLA AF+ VLGN+KAS+++FNISGEKYV+FDGLAKACAKAGGFPEPEIVHYN
Sbjct: 246 ISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYN 305

Query: 308 PKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEAD 367
           PKEFDFGKKK FPFRDQHFFAS+EKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRKEAD
Sbjct: 306 PKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEAD 365

Query: 368 FSTDDIILGKSLVLQ 383
           F+TDD+IL K LVLQ
Sbjct: 366 FTTDDMILSKKLVLQ 378

BLAST of Csa4G500330 vs. TAIR10
Match: AT3G63140.1 (AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 195.3 bits (495), Expect = 7.0e-50
Identity = 129/370 (34.86%), Postives = 193/370 (52.16%), Query Frame = 1

Query: 16  TSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTA-SAKKNILIM----GGTRFIG 75
           +SFS L SS S  + + L   ++  R++   K  +  ++   KKN+LI+    GG   IG
Sbjct: 38  SSFSSLSSSSSS-SSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIG 97

Query: 76  IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 135
            + ++ L+  GH VT+ T G   +   ++ P    ++      K +   G+  +   V +
Sbjct: 98  FYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVW--GNPAN---VAN 157

Query: 136 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 195
            +    FDVV D NG++ D V P++D      ++QF++ SSAG+Y  ++  PH E DAV 
Sbjct: 158 VVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVK 217

Query: 196 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 255
             + H   +  E  LA    NW S RP Y+ G  N    EEWFF R+   R +PIP SG+
Sbjct: 218 ADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGL 277

Query: 256 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 315
           Q+T + HV+DL++     + N + AS  +FN   ++ V+ DG+AK CA A G    EIVH
Sbjct: 278 QLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIVH 337

Query: 316 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 375
           Y+PK      KK F FR+ HF+A    AK +LGW+ + +L E L + +      G  +KE
Sbjct: 338 YDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKE 397

BLAST of Csa4G500330 vs. NCBI nr
Match: gi|449457309|ref|XP_004146391.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis sativus])

HSP 1 Score: 774.2 bits (1998), Expect = 1.0e-220
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1

Query: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

BLAST of Csa4G500330 vs. NCBI nr
Match: gi|659082960|ref|XP_008442117.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cucumis melo])

HSP 1 Score: 766.1 bits (1977), Expect = 2.8e-218
Identity = 378/383 (98.69%), Postives = 381/383 (99.48%), Query Frame = 1

Query: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60
           MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI
Sbjct: 1   MGIMANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNI 60

Query: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120
           LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDR 120

Query: 121 KDFDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHF 180
           KDFDFVKSSLSAAGFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHF
Sbjct: 121 KDFDFVKSSLSAAGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHF 180

Query: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPNSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPE 300
           IPNSGIQITQLGHVKDLA AFVQVLGNDKASQQVFNISGEKYV+FDGLAKACAKAGGFPE
Sbjct: 241 IPNSGIQITQLGHVKDLATAFVQVLGNDKASQQVFNISGEKYVTFDGLAKACAKAGGFPE 300

Query: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360
           PEIVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRG
Sbjct: 301 PEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRG 360

Query: 361 TFRKEADFSTDDIILGKSLVLQA 384
           TFRKEADFSTDDIILGKSLVLQA
Sbjct: 361 TFRKEADFSTDDIILGKSLVLQA 383

BLAST of Csa4G500330 vs. NCBI nr
Match: gi|1009116591|ref|XP_015874856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 682.6 bits (1760), Expect = 4.1e-193
Identity = 330/370 (89.19%), Postives = 349/370 (94.32%), Query Frame = 1

Query: 14  KFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFL 73
           K  SFS+LPSSLSDFNG RL  Q+QYK+KV QPKG LHVTAS+KK ILIMGGTRFIG+FL
Sbjct: 12  KHPSFSLLPSSLSDFNGIRLQTQLQYKKKVYQPKGALHVTASSKKKILIMGGTRFIGVFL 71

Query: 74  SRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAA 133
           SRLLVK+GHQVTLFTRGKAP+T+QLPGES+ DY DF SKILHLKGDRKDFDFVKSSLSA 
Sbjct: 72  SRLLVKDGHQVTLFTRGKAPITKQLPGESDKDYTDFSSKILHLKGDRKDFDFVKSSLSAE 131

Query: 134 GFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKG 193
           GFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPHFE DAVDPKSRHKG
Sbjct: 132 GFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFETDAVDPKSRHKG 191

Query: 194 KLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH 253
           KLETESLL S+DVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH
Sbjct: 192 KLETESLLKSRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGH 251

Query: 254 VKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDF 313
           VKDLA  F  VLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPEI+HYNPKEFDF
Sbjct: 252 VKDLAKVFADVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKEFDF 311

Query: 314 GKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDI 373
           GKKK FPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGT+RKEADF TDDI
Sbjct: 312 GKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFETDDI 371

Query: 374 ILGKSLVLQA 384
           ILGKSLVLQ+
Sbjct: 372 ILGKSLVLQS 381

BLAST of Csa4G500330 vs. NCBI nr
Match: gi|802755325|ref|XP_012088856.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jatropha curcas])

HSP 1 Score: 682.2 bits (1759), Expect = 5.3e-193
Identity = 334/380 (87.89%), Postives = 352/380 (92.63%), Query Frame = 1

Query: 4   MANPMAAHHQKFTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM 63
           MA  +A   Q   SFS+LPSS SDFNG RLH+Q+Q KRKV Q KG L VTAS  KNILIM
Sbjct: 1   MARLVAVQQQTQPSFSLLPSSFSDFNGTRLHSQIQCKRKVWQTKGALQVTASTSKNILIM 60

Query: 64  GGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDF 123
           GGTRFIG+FLSRLLVKEGHQVTLFTRGKAP+TQQLPGES+ +YADF SKILHLKGDRKDF
Sbjct: 61  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDF 120

Query: 124 DFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEVD 183
           +FVKSSLSA GFDVVYDINGREA EVEPI+DALPKLEQFIYCSSAGVYLKSDLLPH E D
Sbjct: 121 EFVKSSLSAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETD 180

Query: 184 AVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 243
           AVDPKSRHKGKLETESLL SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN
Sbjct: 181 AVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240

Query: 244 SGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEI 303
           SG+QITQLGHVKDLA AF+QVLGN+KAS+QVFNISGEKYV+FDGLA+ACAKAGGFPEPE+
Sbjct: 241 SGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEL 300

Query: 304 VHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 363
           VHYNPKEFDFGKKK FPFRDQHFFASIEKAK VLGWKPEFDLVEGLADSYNLDFGRGTFR
Sbjct: 301 VHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFR 360

Query: 364 KEADFSTDDIILGKSLVLQA 384
           KEADFSTDD+ILGKSLVLQA
Sbjct: 361 KEADFSTDDLILGKSLVLQA 380

BLAST of Csa4G500330 vs. NCBI nr
Match: gi|747089109|ref|XP_011092178.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Sesamum indicum])

HSP 1 Score: 673.3 bits (1736), Expect = 2.5e-190
Identity = 329/381 (86.35%), Postives = 356/381 (93.44%), Query Frame = 1

Query: 4   MANPMAAHHQKFTSFSVL-PSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILI 63
           MA+ +  HH++ +S S+L  SSLSDFNGARL A VQYKRK+ QPKG L VTAS+ K ILI
Sbjct: 1   MASMVVVHHKQPSSTSILLSSSLSDFNGARLTASVQYKRKLWQPKGALRVTASSTKKILI 60

Query: 64  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKD 123
           MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESEAD+ADF SKILHLKGDRKD
Sbjct: 61  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILHLKGDRKD 120

Query: 124 FDFVKSSLSAAGFDVVYDINGREADEVEPIIDALPKLEQFIYCSSAGVYLKSDLLPHFEV 183
           F+FVKSSL+A GFDVVYDINGREA EVEPI++ALP LEQ+IYCSSAGVYLKSD  PHFE+
Sbjct: 121 FEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSDYPPHFEI 180

Query: 184 DAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 243
           DAVDPKSRHKGKLETESLL S+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 244 NSGIQITQLGHVKDLANAFVQVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPE 303
           NSG+Q+TQLGHVKDLA AF++VLGN+KAS++VFNISGEKYV+FDGLAKACAKA GFPEPE
Sbjct: 241 NSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKAAGFPEPE 300

Query: 304 IVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 363
           IVHYNPKEFDFGKKKPFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360

Query: 364 RKEADFSTDDIILGKSLVLQA 384
           RKEADFSTDDIILGKSLVLQ+
Sbjct: 361 RKEADFSTDDIILGKSLVLQS 381

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CP41B_ARATH1.0e-18885.07Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ... [more]
CP41A_ARATH1.2e-4834.86Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ... [more]
UXS1_RAT3.6e-0823.21UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1[more]
UXS1_PONAB3.6e-0823.21UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1[more]
UXS1_MOUSE3.6e-0823.21UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
V4TB37_9ROSI5.0e-19084.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1[more]
W9REG7_9ROSA1.2e-18885.79Uncharacterized protein OS=Morus notabilis GN=L484_018888 PE=4 SV=1[more]
V4T121_9ROSI1.2e-18884.51Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001494mg PE=4 SV=1[more]
A0A068VK15_COFCA1.6e-18886.36Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012344001 PE=4 SV=1[more]
V4KDW6_EUTSA4.7e-18886.25Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007937mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G09340.15.9e-19085.07 chloroplast RNA binding[more]
AT3G63140.17.0e-5034.86 chloroplast stem-loop binding protein of 41 kDa[more]
Match NameE-valueIdentityDescription
gi|449457309|ref|XP_004146391.1|1.0e-220100.00PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
gi|659082960|ref|XP_008442117.1|2.8e-21898.69PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Cuc... [more]
gi|1009116591|ref|XP_015874856.1|4.1e-19389.19PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ziz... [more]
gi|802755325|ref|XP_012088856.1|5.3e-19387.89PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jat... [more]
gi|747089109|ref|XP_011092178.1|2.5e-19086.35PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Ses... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0007623 circadian rhythm
biological_process GO:0005996 monosaccharide metabolic process
biological_process GO:0032544 plastid translation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
cellular_component GO:0005773 vacuole
cellular_component GO:0010319 stromule
cellular_component GO:0005840 ribosome
cellular_component GO:0009506 plasmodesma
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005777 peroxisome
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0048046 apoplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0010297 heteropolysaccharide binding
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102374cucumber EST collection version 3.0transcribed_cluster
CU111736cucumber EST collection version 3.0transcribed_cluster
CU166154cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G500330.1Csa4G500330.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU102374CU102374transcribed_cluster
CU166154CU166154transcribed_cluster
CU111736CU111736transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratase, N-terminal domainPFAMPF01370Epimerasecoord: 60..277
score: 5.8
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 57..240
score: 2.0
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 57..351
score: 4.07
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 241..352
score: 1.2
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 59..379
score: 4.9E
NoneNo IPR availablePANTHERPTHR10366:SF289CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTICcoord: 59..379
score: 4.9E