Csa4G499320 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G499320
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 17446826 .. 17447147 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTTGTGCGCTACAGTATCTGTACAGCTTTTCCTCATCTGTTCAGGCTTACTCGCTCCCATGATGCTAGGGTTGTTGATGTTTGGGTTCAAGACACTGAGGCTTGGGATTTGCAACTTTGTCAAAATCTAAATGATTTAGAATCTATTGAGTGGGCTGCTTTGTCCCTTTTGTTACCTTCAGTCCATCTCCGCCTTTGCTTGATTCTTGGATTCGGACCATTGATCCTTCCTCCACATTTACTGTTAAATCTCTTATGGATGATTTGGTGGGATCTATTGACTTTCATGTTAAGGAATTTTATTCTGCTATTTAA

mRNA sequence

ATGGCTTCCTTGTGCGCTACAGTATCTGTACAGCTTTTCCTCATCTGTTCAGGCTTACTCGCTCCCATGATGCTAGGGTTGTTGATGTTTGGTCCATCTCCGCCTTTGCTTGATTCTTGGATTCGGACCATTGATCCTTCCTCCACATTTACTGTTAAATCTCTTATGGATGATTTGGTGGGATCTATTGACTTTCATGTTAAGGAATTTTATTCTGCTATTTAA

Coding sequence (CDS)

ATGGCTTCCTTGTGCGCTACAGTATCTGTACAGCTTTTCCTCATCTGTTCAGGCTTACTCGCTCCCATGATGCTAGGGTTGTTGATGTTTGGTCCATCTCCGCCTTTGCTTGATTCTTGGATTCGGACCATTGATCCTTCCTCCACATTTACTGTTAAATCTCTTATGGATGATTTGGTGGGATCTATTGACTTTCATGTTAAGGAATTTTATTCTGCTATTTAA

Protein sequence

MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLVGSIDFHVKEFYSAI*
Homology
[Close]
BLAST of Csa4G499320 vs. TrEMBL
Match: A0A0A0KYN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499320 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV 60
          MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV
Sbjct: 1  MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV 60

Query: 61 GSIDFHVKEFYSAI 75
          GSIDFHVKEFYSAI
Sbjct: 61 GSIDFHVKEFYSAI 74

[Close]
BLAST of Csa4G499320 vs. NCBI nr
Match: gi|700199637|gb|KGN54795.1| (hypothetical protein Csa_4G499320 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV 60
          MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV
Sbjct: 1  MASLCATVSVQLFLICSGLLAPMMLGLLMFGPSPPLLDSWIRTIDPSSTFTVKSLMDDLV 60

Query: 61 GSIDFHVKEFYSAI 75
          GSIDFHVKEFYSAI
Sbjct: 61 GSIDFHVKEFYSAI 74

The following BLAST results are available for this feature:
BLAST of Csa4G499320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYN5_CUCSA1.3e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G499320 PE=4 SV=1[more]
BLAST of Csa4G499320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199637|gb|KGN54795.1|1.9e-33100.00hypothetical protein Csa_4G499320 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G499320.1Csa4G499320.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G499320Melon (DHL92) v3.6.1cumedB312
Csa4G499320Silver-seed gourdcarcuB0309
Csa4G499320Watermelon (97103) v2cuwmbB293
Csa4G499320Wax gourdcuwgoB398
Csa4G499320Wax gourdcuwgoB409
Csa4G499320Cucumber (Gy14) v1cgycuB499
Csa4G499320Cucurbita maxima (Rimu)cmacuB665
Csa4G499320Cucurbita maxima (Rimu)cmacuB672
Csa4G499320Cucurbita maxima (Rimu)cmacuB861
Csa4G499320Cucurbita moschata (Rifu)cmocuB663
Csa4G499320Cucurbita moschata (Rifu)cmocuB849
Csa4G499320Melon (DHL92) v3.5.1cumeB326
Csa4G499320Watermelon (Charleston Gray)cuwcgB296
Csa4G499320Watermelon (97103) v1cuwmB333
Csa4G499320Cucurbita pepo (Zucchini)cpecuB073
Csa4G499320Cucurbita pepo (Zucchini)cpecuB082
Csa4G499320Cucurbita pepo (Zucchini)cpecuB498
Csa4G499320Bottle gourd (USVL1VR-Ls)culsiB250
Csa4G499320Cucumber (Gy14) v2cgybcuB173