Csa4G350590 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G350590
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	cDNA, clone: J075150J23, full insert sequence; contains IPR005349 (Uncharacterised protein family UPF0136, Transmembrane)
Location	Chr4 : 14306643 .. 14309497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTATCTTTCGCAGATCACTTGACTTTGGCGATCCCTTGATCCATTGTTTCAATACGCCCTTCATTCTTCTTTGTCATCTTCTTCAATTTTCCTAGGATGATGCTCTGATGGTAATTTGTTGGAACTCTTCCACTAACAAGATTTCAATAGAATTTGTATACTTCTCTTATTATTGAATATGGAGTTTGCAGTACAATATCAGTAATCGAATTGAATGACTTACAAGTCGAGGAACAACCTCTCTCTCTCAACACTGCTAACCTGTCTTTCAAGGTTTCACGGCCCAACTTCTTCTCTCAAGAAATCTCACCAACTTCCCCTCCTCATTTTCCTATTTATTCAATCTACTACTCAGTGGTCCCCCATTTTTCGGTTACCACATCAGTAACCGACTTCTCCCACTTATTCTTATTCCTTCTAGAATACTGATGAATTATGGGTGGTCTACCAATAACTCCCTTCTCTCACCCTCCCTCCATTTATAACAAGATGTAACCACCCTAGTAACCACACTTACACAATAACTACTAGTAACTTCCCAAGTATCTAATTACCCTTGTACAAGATAAACTCATCTAACTAATCTTGGTATCTAGCACCTTTGTCAGAAGGATCATCTCTTTTGAGGTTGTCTCGCAAGCGAGAACGGTGTGAAATCTTTTCTTTTATCTTGCAGGAGTTTGATGTTAGCATTGGGCAGAGAGACGTTTGTGTGATGATCAAGGATTGCAGTGCCCCCTCCATCGGCCTTTTGGAGAGAATGGGGGGTTGTTTTTTTGTATGCCCGAATGAAAGCAGTTGTTTCCATTGAAAAAATAGTATGGAGAAAAGAGCCTACCTGGTTTAAGGAACTTCTAAAGGGTTGGATGCAAACAAAATTTTTGAAACACAGATAAAATTGCGAGGGATTGTAATTTCAATTTTTCAGTACCTATTTCCTGTTTTCTCATTCAGAATAAATTTAAGAAATAAAACTTCTTCCTCAAAGTTATTGGAAGAGAATTTGACTCAGTATGGCCTACTCTTTCTGGTAGGCATGGAGCTTCACAGGAGCGAAAACTAAATATCACTTGCCAAACTGTCAATTAGATATGTTCTCCACTAAACAACCTTTTGAAAGCTGCATCTGCTTCCTTTTGTTTCACCTGGGCATTTAGCTGCTGGGTGTTAGTGAACTTATTGGCGTCAAAGCTAAAGTTTACGGGAGGGAGGAGTACAAATGGAAGTGTAACATTTGCGCGTATTTATAGCAGATGTGTGATTTTTTTAAAGTTTAAGAAACTAGATTCCATTCTGTTCTGTTTTGATGAAATGTAGAAAAATACGAGCGACTTTAATGTGTTCTCTCTCTCTCTCTCTCACTTTATTTATTATTATTATTATTTTTTTAATGTATGAGATGATATTAAATTAGAGGGTCCAAATGAGGAAAAATGGATGAAGTTCAGAAAAGTTTCTTCCTGTATAATACCTTCAACTTTGAAAGAATACCAACTACTGCTGCAGTGTTCGTTTCTCTCCTAAAATTTGATTATTAATCGGTAATAGGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGGTAATTGACTTTTTTTCTCTTCTAAGTCAGTTGCATCTCCCCCTAATTGTACGTCAGACATGCAATATAACATGTATTAATTTGGTTTATTCCCCTAAAAAATGGTCTTATTAATTTTAACTGTTTGTTTGGTCTCCAATGCTGGGTTATCTTTCTATTTGCCTGTGTATTCTTTCATTTGATCTCAATGAAAGTTCTATTTCTTTGAATAGGAAAAACCATAATAGATTCATATGACATGCTTGACTTGATTGGAAAACGTAAGTTACATCTAGTACTCTGATTGACTGTGTTTTTGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGGTATGCACCTCATCTATATAAACATTTGACCAGAATCAATAGATATCAATGCTATAATGTAGTGATAATACTATTTTCGTAATTGTAGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGGTAAACTTTTTTTTGATAGTTCTGACTGCCATATCTTCCTTTGCTAGTTATAATACAGATTAATCAAATCCTCTAACGCAAATTTGGTTTTGGTTTTGTTTCTCTCGCAGTGCTGCAATGCTATGCTTCTATTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCAAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAATGAATTCAAATCCTATACATAGTTTGATTACACTTGGAAAAATAATTTACTTTCTGATGCAGCTTGCTGAGTTAAGTTAGGAGGGGAAAGAAGGCCTTATTTTAATTTGTTGGGATGGTAAAATACTAAATGAAGCTTAGGAGGTGGGAAAAATGCACTTGAATACTCTATAATCTGTGAGGAGCTAGGTGTAGAATTCATGAAGAGGGAGTATGTTACTTGAAGGCAACGAGAGATTGGATTTTGCTTTTGAACACAATGGTTATGAGGTATGTATTTATGCAATCTGTAGAAATAACTTGTTAGTAGTTGAGTGCTTTCGTTGGGGTAAACTACCCTTTAATAAATAGACGAGGGGATTATTACTGGAAGACTTCTGTAATAATTTAGATGGTTATATAATATATGGTGAATATTTGAAGGTACAAAGTCTAGCTAGATTTGGTTTATCTCATTC

mRNA sequence

ATGGCCGGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGTGCTGCAATGCTATGCTTCTATTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCAAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAA

Coding sequence (CDS)

ATGGCCGGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGTGCTGCAATGCTATGCTTCTATTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCAAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAA

Protein sequence

MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA*

Homology

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BLAST of Csa4G350590 vs. Swiss-Prot
Match: FAX1_ARATH (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-37
Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GG+V+SGGL+ F FSRN ++ S+ ++ GG LL LSTLSLKIWR+GKSSFP+ILGQAV +A
Sbjct: 110 GGLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSA 169

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSA 116
             FW ++  YS+TK +FP  ++A +SA MLCFY YVV+SGGNPPPKKLKPS ++
Sbjct: 170 VVFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATS 223

[Close]

BLAST of Csa4G350590 vs. Swiss-Prot
Match: FAX6_ARATH (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana GN=FAX6 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.5e-09
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLST-LSLKIWRQGKSSFPFILGQAVFTA 62
           G +++ GG I ++   + ++F+     G LL+L+  +SLK + + K+S   ++ Q V  A
Sbjct: 11  GMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTIAMVLQTVIAA 70

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 109
           +      Q Y LT  + P  + A +SA M CFY+Y + +GGN  P K
Sbjct: 71  ALTLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117

[Close]

BLAST of Csa4G350590 vs. Swiss-Prot
Match: FAX5_ARATH (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana GN=FAX5 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-08
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLST-LSLKIWRQGKSSFPFILGQAVFTA 62
           G +++ GG I ++   + ++ +     G L+VL+  +SLK + + K+S    L + V  A
Sbjct: 11  GILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAA 70

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 109
           +  +   Q +  T+ + P A+ A +SA M CFY+Y + +GGN  P K
Sbjct: 71  ALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117

[Close]

BLAST of Csa4G350590 vs. Swiss-Prot
Match: FAX3_ARATH (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 34/98 (34.69%), Postives = 48/98 (48.98%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRN-PSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           G ++L GG I+F+ S + P+    ++ GGAL  LS  SLK  R+G+SS  F+ GQ    A
Sbjct: 212 GLLLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVA 271

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVI 100
             F    +     K+ F        S  +L FYLY ++
Sbjct: 272 IIFLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMV 309

[Close]

BLAST of Csa4G350590 vs. TrEMBL
Match: A0A0A0KY33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G350590 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.9e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1


Query: 1   MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT 60
           MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT
Sbjct: 1   MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT 60

Query: 61  ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 61  ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 116

[Close]

BLAST of Csa4G350590 vs. TrEMBL
Match: M5XJB9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011494mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 9.4e-39
Identity = 84/115 (73.04%), Postives = 90/115 (78.26%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GGIVLSGGLI FIFSRNP+  S+ ++ G ALL LST SLKIWRQGKSS PFILGQA   A
Sbjct: 93  GGIVLSGGLIGFIFSRNPATLSTGVLYGAALLALSTFSLKIWRQGKSSLPFILGQAALAA 152

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
              W   QTYSLTK VFPT  YA +SAAMLCFY YVV+SGGNPPPKKLKPS S A
Sbjct: 153 VLLWKHVQTYSLTKKVFPTGFYAVISAAMLCFYSYVVLSGGNPPPKKLKPSASVA 207

[Close]

BLAST of Csa4G350590 vs. TrEMBL
Match: A0A061EGH9_THECC (Transmembrane proteins 14C, putative isoform 3 OS=Theobroma cacao GN=TCM_018596 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-38
Identity = 80/112 (71.43%), Postives = 91/112 (81.25%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 62
           GG+VLSGGL+ F+FSRNP+   +++ GGALL LST SLKIWRQGKSS PFI GQA   A 
Sbjct: 76  GGLVLSGGLVGFVFSRNPT---TILFGGALLALSTFSLKIWRQGKSSLPFIFGQAALAAV 135

Query: 63  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPS 115
            FW ++QTYSLTK +FP A YAA+SAAMLCFY YVVISGGNPPPKKLK S S
Sbjct: 136 LFWKNFQTYSLTKKLFPNAFYAAISAAMLCFYSYVVISGGNPPPKKLKSSAS 184

[Close]

BLAST of Csa4G350590 vs. TrEMBL
Match: A0A061EES3_THECC (Transmembrane proteins 14C, putative isoform 1 OS=Theobroma cacao GN=TCM_018596 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-38
Identity = 80/112 (71.43%), Postives = 91/112 (81.25%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 62
           GG+VLSGGL+ F+FSRNP+   +++ GGALL LST SLKIWRQGKSS PFI GQA   A 
Sbjct: 121 GGLVLSGGLVGFVFSRNPT---TILFGGALLALSTFSLKIWRQGKSSLPFIFGQAALAAV 180

Query: 63  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPS 115
            FW ++QTYSLTK +FP A YAA+SAAMLCFY YVVISGGNPPPKKLK S S
Sbjct: 181 LFWKNFQTYSLTKKLFPNAFYAAISAAMLCFYSYVVISGGNPPPKKLKSSAS 229

[Close]

BLAST of Csa4G350590 vs. TrEMBL
Match: W9RUK4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015510 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GGIVLSGGLI F+FSRNP+  ++ ++ GGALL LSTLSLKIWR+GKSS P+ILGQ    A
Sbjct: 111 GGIVLSGGLIGFVFSRNPATLTTGVLYGGALLALSTLSLKIWRRGKSSLPYILGQGALAA 170

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           +  W ++QT+SLTK VFPT  YA +S AMLCFY YV++SGGNPPPKKLK SPS A
Sbjct: 171 ALLWKNFQTFSLTKKVFPTGFYAFISGAMLCFYSYVLLSGGNPPPKKLKSSPSVA 225

[Close]

BLAST of Csa4G350590 vs. TAIR10
Match: AT3G57280.1 (AT3G57280.1 Transmembrane proteins 14C)

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-38
Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GG+V+SGGL+ F FSRN ++ S+ ++ GG LL LSTLSLKIWR+GKSSFP+ILGQAV +A
Sbjct: 110 GGLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSA 169

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSA 116
             FW ++  YS+TK +FP  ++A +SA MLCFY YVV+SGGNPPPKKLKPS ++
Sbjct: 170 VVFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATS 223

[Close]

BLAST of Csa4G350590 vs. TAIR10
Match: AT3G20510.1 (AT3G20510.1 Transmembrane proteins 14C)

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLST-LSLKIWRQGKSSFPFILGQAVFTA 62
           G +++ GG I ++   + ++F+     G LL+L+  +SLK + + K+S   ++ Q V  A
Sbjct: 11  GMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTIAMVLQTVIAA 70

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 109
           +      Q Y LT  + P  + A +SA M CFY+Y + +GGN  P K
Sbjct: 71  ALTLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117

[Close]

BLAST of Csa4G350590 vs. TAIR10
Match: AT1G50740.1 (AT1G50740.1 Transmembrane proteins 14C)

HSP 1 Score: 57.8 bits (138), Expect = 5.3e-09
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLST-LSLKIWRQGKSSFPFILGQAVFTA 62
           G +++ GG I ++   + ++ +     G L+VL+  +SLK + + K+S    L + V  A
Sbjct: 11  GILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAA 70

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 109
           +  +   Q +  T+ + P A+ A +SA M CFY+Y + +GGN  P K
Sbjct: 71  ALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117

[Close]

BLAST of Csa4G350590 vs. TAIR10
Match: AT2G38550.1 (AT2G38550.1 Transmembrane proteins 14C)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07
Identity = 34/98 (34.69%), Postives = 48/98 (48.98%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRN-PSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           G ++L GG I+F+ S + P+    ++ GGAL  LS  SLK  R+G+SS  F+ GQ    A
Sbjct: 212 GLLLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVA 271

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVI 100
             F    +     K+ F        S  +L FYLY ++
Sbjct: 272 IIFLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMV 309

[Close]

BLAST of Csa4G350590 vs. NCBI nr
Match: gi|700199357|gb|KGN54515.1| (hypothetical protein Csa_4G350590 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 9.9e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1


Query: 1   MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT 60
           MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT
Sbjct: 1   MAGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFT 60

Query: 61  ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 61  ASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 116

[Close]

BLAST of Csa4G350590 vs. NCBI nr
Match: gi|778694198|ref|XP_011653763.1| (PREDICTED: uncharacterized protein LOC101221930 isoform X1 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 62
           GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS
Sbjct: 119 GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 178

Query: 63  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 179 FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 232

[Close]

BLAST of Csa4G350590 vs. NCBI nr
Match: gi|659129248|ref|XP_008464592.1| (PREDICTED: uncharacterized protein LOC103502437 isoform X1 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-55
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 62
           GGIVLSGGLISFIFSRNPSAFSSLVSGGALL LSTLSLKIWRQGKSSFPFILGQAVFTAS
Sbjct: 119 GGIVLSGGLISFIFSRNPSAFSSLVSGGALLALSTLSLKIWRQGKSSFPFILGQAVFTAS 178

Query: 63  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           FFWNSYQTY LTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 179 FFWNSYQTYLLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 232

[Close]

BLAST of Csa4G350590 vs. NCBI nr
Match: gi|658048079|ref|XP_008359731.1| (PREDICTED: uncharacterized protein LOC103423428 [Malus domestica])

HSP 1 Score: 171.4 bits (433), Expect = 9.3e-40
Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GGIVL GGLI FIFSRNP+  S+ ++ GGALL LST+SLKIWRQGKSS PFILGQA    
Sbjct: 183 GGIVLGGGLIGFIFSRNPATLSTGVLFGGALLALSTISLKIWRQGKSSLPFILGQAALAV 242

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           +  W + QTY+LTK VFPT  YAA+SAAMLCFY YVV+SGGNPPPKKLKPS SAA
Sbjct: 243 ALLWKNLQTYALTKKVFPTGFYAAISAAMLCFYSYVVLSGGNPPPKKLKPSASAA 297

[Close]

BLAST of Csa4G350590 vs. NCBI nr
Match: gi|1009159949|ref|XP_015898090.1| (PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 170.2 bits (430), Expect = 2.1e-39
Identity = 84/115 (73.04%), Postives = 93/115 (80.87%), Query Frame = 1


Query: 3   GGIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 62
           GGIVLSGGLI F+F+RN S  SS ++ GGALL LST SLKIWRQGKSS PFILGQ    A
Sbjct: 153 GGIVLSGGLIGFVFTRNLSTLSSGVLYGGALLALSTFSLKIWRQGKSSLPFILGQGALAA 212

Query: 63  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 117
           S  W ++QTYSLTK VFPT  YAA+SAAMLCFY YV++SGGNPPPKKLK SPS A
Sbjct: 213 SLLWKNFQTYSLTKKVFPTGFYAAISAAMLCFYSYVLLSGGNPPPKKLKSSPSVA 267

The following BLAST results are available for this feature:

BLAST of Csa4G350590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAX1_ARATH	3.3e-37	63.16	Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 ...	[more]
FAX6_ARATH	6.5e-09	32.71	Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana GN=FAX6 PE=3 SV=1	[more]
FAX5_ARATH	9.4e-08	30.84	Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana GN=FAX5 PE=3 SV=1	[more]
FAX3_ARATH	2.3e-06	34.69	Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 ...	[more]

BLAST of Csa4G350590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY33_CUCSA	6.9e-58	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G350590 PE=4 SV=1	[more]
M5XJB9_PRUPE	9.4e-39	73.04	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011494mg PE=4 SV=1	[more]
A0A061EGH9_THECC	3.6e-38	71.43	Transmembrane proteins 14C, putative isoform 3 OS=Theobroma cacao GN=TCM_018596 ...	[more]
A0A061EES3_THECC	3.6e-38	71.43	Transmembrane proteins 14C, putative isoform 1 OS=Theobroma cacao GN=TCM_018596 ...	[more]
W9RUK4_9ROSA	1.0e-37	67.83	Uncharacterized protein OS=Morus notabilis GN=L484_015510 PE=4 SV=1	[more]

BLAST of Csa4G350590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57280.1	1.9e-38	63.16	Transmembrane proteins 14C	[more]
AT3G20510.1	3.7e-10	32.71	Transmembrane proteins 14C	[more]
AT1G50740.1	5.3e-09	30.84	Transmembrane proteins 14C	[more]
AT2G38550.1	1.3e-07	34.69	Transmembrane proteins 14C	[more]

BLAST of Csa4G350590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700199357\|gb\|KGN54515.1\|	9.9e-58	100.00	hypothetical protein Csa_4G350590 [Cucumis sativus]	[more]
gi\|778694198\|ref\|XP_011653763.1\|	1.1e-56	100.00	PREDICTED: uncharacterized protein LOC101221930 isoform X1 [Cucumis sativus]	[more]
gi\|659129248\|ref\|XP_008464592.1\|	1.6e-55	98.25	PREDICTED: uncharacterized protein LOC103502437 isoform X1 [Cucumis melo]	[more]
gi\|658048079\|ref\|XP_008359731.1\|	9.3e-40	73.04	PREDICTED: uncharacterized protein LOC103423428 [Malus domestica]	[more]
gi\|1009159949\|ref\|XP_015898090.1\|	2.1e-39	73.04	PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005349	TMEM14

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022607	cellular component assembly
biological_process	GO:0045229	external encapsulating structure organization
biological_process	GO:0015908	fatty acid transport
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0009987	cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU089456	cucumber EST collection version 3.0	transcribed_cluster
CU094099	cucumber EST collection version 3.0	transcribed_cluster
CU101164	cucumber EST collection version 3.0	transcribed_cluster
CU142340	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G350590.1	Csa4G350590.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU101164	CU101164	transcribed_cluster
CU089456	CU089456	transcribed_cluster
CU094099	CU094099	transcribed_cluster
CU142340	CU142340	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005349	TMEM14 family	PANTHER	PTHR12668	TRANSMEMBRANE PROTEIN 14, 15	coord: 3..114 score: 2.2
IPR005349	TMEM14 family	PFAM	PF03647	Tmemb_14	coord: 3..94 score: 9.
None	No IPR available	PANTHER	PTHR12668:SF18	SUBFAMILY NOT NAMED	coord: 3..114 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G350590	Cla006828	Watermelon (97103) v1	cuwmB342
Csa4G350590	MELO3C026314	Melon (DHL92) v3.5.1	cumeB334
Csa4G350590	ClCG04G003840	Watermelon (Charleston Gray)	cuwcgB297
Csa4G350590	Lsi01G018120	Bottle gourd (USVL1VR-Ls)	culsiB256
Csa4G350590	MELO3C026314.2	Melon (DHL92) v3.6.1	cumedB323
Csa4G350590	Cla97C04G070800	Watermelon (97103) v2	cuwmbB294
Csa4G350590	Bhi03G001970	Wax gourd	cuwgoB393
Csa4G350590	CSPI04G17270	Wild cucumber (PI 183967)	cpicuB181
Csa4G350590	Cucsa.018200	Cucumber (Gy14) v1	cgycuB380
Csa4G350590	CmaCh03G000400	Cucurbita maxima (Rimu)	cmacuB675
Csa4G350590	CmoCh03G000380	Cucurbita moschata (Rifu)	cmocuB665
Csa4G350590	Cp4.1LG10g11330	Cucurbita pepo (Zucchini)	cpecuB076
Csa4G350590	CsGy4G016510	Cucumber (Gy14) v2	cgybcuB167
Csa4G350590	Carg24999	Silver-seed gourd	carcuB0555

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G350590	Cucurbita maxima (Rimu)	cmacuB863
Csa4G350590	Cucurbita maxima (Rimu)	cmacuB873
Csa4G350590	Cucurbita moschata (Rifu)	cmocuB851
Csa4G350590	Cucurbita moschata (Rifu)	cmocuB860
Csa4G350590	Watermelon (97103) v1	cuwmB345
Csa4G350590	Cucurbita pepo (Zucchini)	cpecuB493
Csa4G350590	Cucurbita pepo (Zucchini)	cpecuB501
Csa4G350590	Silver-seed gourd	carcuB0506
Csa4G350590	Silver-seed gourd	carcuB0507