CmoCh03G000380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTTCAGTCTTCTGTAAAACGTGGAGACGATCCAGATTCTTCGAATAAGTATAATCCTCTAAACCCCCGACTCGATTCGTCACATTCAATCGGAACTCAGATCCTCCTTGTTGAATTTTCGCTCCGTTGATTGCTCGATTTTGTTGTTAATTCTTCTTCTAGCCTTGCTCCGATCTAAAATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTCTTCGCCATCAACCGTGGCTTTCGCCTGCAACAGCGCCGCTCATTTTTAGCTCCTCGCCCTTCTCTTTCCTTGCCTAAGGTTTGTGTTTCATTTCCGTATTCTTGTTTCTGATTTCTTTTGGCAACTTTACGAATCCGAGATTTGAAGAAATTGTTGTGAATTTCGATGAGTTATGAGTCTGTTTCGCTATTATGAATTAGTGATGAAAACGCTTTTTCTGTAAGTCTGGGATTTGATTTATATTCATTCAAGGACGGATAATTAAGATTAAATTCGCTATCTTGAATGTTTTAATTCAGAAACAGTATCTTTTGCAAGTTGGGTTGAATGATTTTGATGTTTCGATTACCTGATTTAATACTACGTTCAATCTAATAAGCTCTCGCTGCTGCTTGAATTTTATTGCTTCTCTGCTTGAATTTAGTTTTCGCTTTGTTCACTTGTTAGAGTTTTCATCGATACTCATCTGTACATTTTTTAGAACTTAGATCGAACTTCTAATTGACAAGAGATAGGACAGTTCCCATTTAGTTTTAAAAGTTTTGAAATGGTCATTTCTTGAAAGTGCTTAATTCTTGTGCTGTGTTTAAGTAATGGCTTAGGTTAATGGTGGTAAACACGAGGGCATCAAGTGGCATAATCGGTTGAACTGATACTCGAGTTTTCCTTTTTTAGTTATCGATTGTTATGAGCCTTGAAGGATCTGCTTCAAATACTGCTGATGCTGATGCCCAGACTAAGACAACTTTAAGCGATGCCAGTTATGCATCAGAATCTCAAGTTACCTCAAATTCATATCCTGGTGTTGAAGAGTCGTCTGATGTTGGAAATGTAGAGAACGACGTTGGCACTGTGCCTAAACGATCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCCTTCGGTGAGTTTTGCATTCTTTTGTCATTGATAGGCTAGCTGCTTGTAGCAGTTAGAATGCAACATTATTGCTTGCATTGTGTTGGGGTCTTGGCCTTTCACTTGAGGAGGAGGAAAAGTGCTTCTCACCTCCTAATATTGTTTCTCAAATGCATTACATTGAATGATGATTTGTTGTGTTAAATGTAGCTATTAAGAAACTGTAACCTGATCAAAGCCTTAGTTTTTTGCAATCACTTATTTATTATACGAAACGAGTAGCAGTTCTACAAATGCATTCATTCAGTTTAAAATGTGAATGGTTGATTTGATCGCCAAATGCCTTGACCTAGTGGCTCTAGAATGACTGAGATGACTCAAGTCATGTGATCATGAGGATTACGAATGGAATGCAGAAAATAACCAGCTGGTTGAGGTTAATTTTCATAATGTATTCTGATAAAACAGTAATCTTTAAGGAGCTCATGCAACAAAAACATGAAACAGAGATAAAATAGTGAGGGATTATTTCAATTCTTCAGTACCCGTTTCCCGTTTTCTCATTCAGAATAAATTTAAGAAAGAAAACTTCTTCGTCAATGGTATTGGAAGAAAATTTGACTGAGCATGCCCTTCACCTGGTGGGCATTGGTCTTGAAGGAGAAAACAAAATTCCATTTGCCAAACTGTTAATTAGATATGTTCTCTGCTTAACAACCTTTAGAAAGCTGAATCTGTTTGCTTTCTTTCCCCGTGCCATGAAGCTTTTGGGTGTTAGTGAACTTATTGGCCTATGTCTGTGCTGTGAAAGTTTACTGGAGGGAGAGGTGGGAATGGTAATGTAACATTTAAGAGTTAGTATAGACTGCACATATATATAGCAGGTGTGATGTAATCATCACGTGTGTGGGATTTGTGTTGGGACAGGAAGCTGGTTGTCTCGAATTGCCCTAACTAGTTCTTATTCTTGTTTACTGCTTTGATCTTTGGAAATTTTTTTTTACCAGTGTTGATACGGGAACAGATTGCCTTATAAACTCTCTTTAGGGTACTGGATAATTTGATAATTTCTTTCTTGTATTTGTTAAACTTTAAGAGTCTCTAGATGATGTCCTGTTCTGTTTCAATGCAATGTCGAGAATATGCGTGACTTAGTCTGTTTCTCTGTTTGTTATCTACGGGATGATATTGAATTAGAGGGTTTTAAATAAGGAAAAGGGGGTGAAAGTATCTGACAGTTTCTTTTATTGGAATAATGATAAACCGATAAATCAGGACGTTAAAGCAATAGAGATCCCACATCGTTTAATCTTTGTATGTTCGCTTAAGTTCAGAACCTTCCCTTCCTGTGTAATAAAACATGCCTTCCACTTTGAAAGAATACAACCTAATGGTGCCATGTTCTTACCCCCCCTAACGTTTGACTATGAACTCGTTACAGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTAATATTTTCGAGAAACCCGTCTGCATTGACCAGTTTGATCTCTGGGGGTGCTTTGCTGGCTCTGAGCACTTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTGCCATATATTCTAGGACAAGCAGGTAATTGATTTGGTTACTCTTTTAAGTCAGTTGCATCTCCCTCTAAATATACTTCAGACATGCAATATAACGTGTTTTAATTAGGTCTTTGGAGCCTTTTTTCGTATAGTTAGTTGTTCGGTCTCTCTTGGTGGACTATCTTCTTGTACGCTCGTGCATTCTTACTGCCTCGTTTTAATTGTATACATAATATATGCATTCAGCATGTTTTAATTGCTCGAAATACAAAAGTTATGTTCAAGTTCTGAATTTGACTGTGTGCTTACCATCTTTGCAGTACTTACCGCCTCATTTTTCTGGAATAGTTTTCAGACGTACTCATCGGTATGCACTTTATCGCACTTCATCCATATAAATATTCGACCTGAGTCAATAGATATTAATGTCGTGATTATACTATTTTCGTGATTGTAGACCAAAAACGTGTTTCCATCGGCCTTATACGCTGCACTCAGGTAAACTCTTTTTTGATAGTTCTGACTGACATGTCTTCCTTCGCTAACTCTACTTGAGATTAATCAAATTCTCCCAACGCAAACTTGTTTTGGCTTTGTTTCTCTCAGCGCTGCAATGCTGTGCTTCTACATATATGTGGTAATTTCTGGGGGAAACCCGCCACCAAAAAAATTAAAGCCTTCTCCATCTGCTGCTTAATGAATTTGAATCCTACTGATTACATTTAGGAAACGTTTACTGTGTAGCATGTTGAGTTGAGTTTGAGTTGAGTTTGAGTTGAGTTGAGTTAGGACGGAAAAGAGGACTTATTTTCTTTTGTTGGGATGGTTAAATATGAAATAAAGCTTGGAGGGGAGGGGGGATGTTCTGTACTTCATCATCTGTGAGGTTTGCAAATATGATGTGAATACAAGTTTGGTTGTAGTAAACTCGATAGTTCGAAAAACTTTATCAACTCACGTTTGAATTGGGTTACGAATTTATTTGGATTTGGTTGAGTTCTAATAGATGAAAATTTTAC TCGTTCAGTCTTCTGTAAAACGTGGAGACGATCCAGATTCTTCGAATAAGTATAATCCTCTAAACCCCCGACTCGATTCGTCACATTCAATCGGAACTCAGATCCTCCTTGTTGAATTTTCGCTCCGTTGATTGCTCGATTTTGTTGTTAATTCTTCTTCTAGCCTTGCTCCGATCTAAAATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTCTTCGCCATCAACCGTGGCTTTCGCCTGCAACAGCGCCGCTCATTTTTAGCTCCTCGCCCTTCTCTTTCCTTGCCTAAGTTATCGATTGTTATGAGCCTTGAAGGATCTGCTTCAAATACTGCTGATGCTGATGCCCAGACTAAGACAACTTTAAGCGATGCCAGTTATGCATCAGAATCTCAAGTTACCTCAAATTCATATCCTGGTGTTGAAGAGTCGTCTGATGTTGGAAATGTAGAGAACGACGTTGGCACTGTGCCTAAACGATCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCCTTCGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTAATATTTTCGAGAAACCCGTCTGCATTGACCAGTTTGATCTCTGGGGGTGCTTTGCTGGCTCTGAGCACTTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTGCCATATATTCTAGGACAAGCAGTACTTACCGCCTCATTTTTCTGGAATAGTTTTCAGACGTACTCATCGACCAAAAACGTGTTTCCATCGGCCTTATACGCTGCACTCAGCGCTGCAATGCTGTGCTTCTACATATATGTGGTAATTTCTGGGGGAAACCCGCCACCAAAAAAATTAAAGCCTTCTCCATCTGCTGCTTAATGAATTTGAATCCTACTGATTACATTTAGGAAACGTTTACTGTGTAGCATGTTGAGTTGAGTTTGAGTTGAGTTTGAGTTGAGTTGAGTTAGGACGGAAAAGAGGACTTATTTTCTTTTGTTGGGATGGTTAAATATGAAATAAAGCTTGGAGGGGAGGGGGGATGTTCTGTACTTCATCATCTGTGAGGTTTGCAAATATGATGTGAATACAAGTTTGGTTGTAGTAAACTCGATAGTTCGAAAAACTTTATCAACTCACGTTTGAATTGGGTTACGAATTTATTTGGATTTGGTTGAGTTCTAATAGATGAAAATTTTAC ATGGCGGCGACGGCGTCTCAGTTTTCGTGCTTCTTCGCCATCAACCGTGGCTTTCGCCTGCAACAGCGCCGCTCATTTTTAGCTCCTCGCCCTTCTCTTTCCTTGCCTAAGTTATCGATTGTTATGAGCCTTGAAGGATCTGCTTCAAATACTGCTGATGCTGATGCCCAGACTAAGACAACTTTAAGCGATGCCAGTTATGCATCAGAATCTCAAGTTACCTCAAATTCATATCCTGGTGTTGAAGAGTCGTCTGATGTTGGAAATGTAGAGAACGACGTTGGCACTGTGCCTAAACGATCAGCAAAAATCCATGATTTCTGTTTTGGCATTCCCTTCGGTGGAATTGTTCTAAGTGGTGGCCTTATTAGCTTAATATTTTCGAGAAACCCGTCTGCATTGACCAGTTTGATCTCTGGGGGTGCTTTGCTGGCTCTGAGCACTTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTGCCATATATTCTAGGACAAGCAGTACTTACCGCCTCATTTTTCTGGAATAGTTTTCAGACGTACTCATCGACCAAAAACGTGTTTCCATCGGCCTTATACGCTGCACTCAGCGCTGCAATGCTGTGCTTCTACATATATGTGGTAATTTCTGGGGGAAACCCGCCACCAAAAAAATTAAAGCCTTCTCCATCTGCTGCTTAA
BLAST of CmoCh03G000380 vs. Swiss-Prot
Match: FAX1_ARATH (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana GN=FAX1 PE=2 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.4e-52 Identity = 123/234 (52.56%), Postives = 159/234 (67.95%), Query Frame = 1
BLAST of CmoCh03G000380 vs. Swiss-Prot
Match: FAX5_ARATH (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana GN=FAX5 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12 Identity = 42/117 (35.90%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of CmoCh03G000380 vs. Swiss-Prot
Match: FAX6_ARATH (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana GN=FAX6 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 1
BLAST of CmoCh03G000380 vs. Swiss-Prot
Match: FAX3_ARATH (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana GN=FAX3 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TrEMBL
Match: V4S296_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005778mg PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.0e-54 Identity = 127/237 (53.59%), Postives = 155/237 (65.40%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TrEMBL
Match: A0A151RZN4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030365 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52 Identity = 130/234 (55.56%), Postives = 165/234 (70.51%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TrEMBL
Match: D7TSA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0252g00030 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52 Identity = 118/226 (52.21%), Postives = 158/226 (69.91%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TrEMBL
Match: A0A078C7E4_BRANA (BnaC08g28200D protein OS=Brassica napus GN=BnaC08g28200D PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52 Identity = 129/232 (55.60%), Postives = 164/232 (70.69%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TrEMBL
Match: A0A061EES3_THECC (Transmembrane proteins 14C, putative isoform 1 OS=Theobroma cacao GN=TCM_018596 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.4e-52 Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TAIR10
Match: AT3G57280.1 (AT3G57280.1 Transmembrane proteins 14C) HSP 1 Score: 207.6 bits (527), Expect = 8.0e-54 Identity = 123/234 (52.56%), Postives = 159/234 (67.95%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TAIR10
Match: AT1G50740.1 (AT1G50740.1 Transmembrane proteins 14C) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13 Identity = 42/117 (35.90%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TAIR10
Match: AT3G20510.1 (AT3G20510.1 Transmembrane proteins 14C) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 1
BLAST of CmoCh03G000380 vs. TAIR10
Match: AT2G38550.1 (AT2G38550.1 Transmembrane proteins 14C) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 1
BLAST of CmoCh03G000380 vs. NCBI nr
Match: gi|659129248|ref|XP_008464592.1| (PREDICTED: uncharacterized protein LOC103502437 isoform X1 [Cucumis melo]) HSP 1 Score: 350.5 bits (898), Expect = 2.2e-93 Identity = 188/234 (80.34%), Postives = 203/234 (86.75%), Query Frame = 1
BLAST of CmoCh03G000380 vs. NCBI nr
Match: gi|778694198|ref|XP_011653763.1| (PREDICTED: uncharacterized protein LOC101221930 isoform X1 [Cucumis sativus]) HSP 1 Score: 349.0 bits (894), Expect = 6.3e-93 Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 1
BLAST of CmoCh03G000380 vs. NCBI nr
Match: gi|694450360|ref|XP_009350604.1| (PREDICTED: uncharacterized protein LOC103942119 [Pyrus x bretschneideri]) HSP 1 Score: 219.2 bits (557), Expect = 7.6e-54 Identity = 130/227 (57.27%), Postives = 157/227 (69.16%), Query Frame = 1
BLAST of CmoCh03G000380 vs. NCBI nr
Match: gi|567856978|ref|XP_006421172.1| (hypothetical protein CICLE_v10005778mg [Citrus clementina]) HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53 Identity = 127/237 (53.59%), Postives = 155/237 (65.40%), Query Frame = 1
BLAST of CmoCh03G000380 vs. NCBI nr
Match: gi|657968390|ref|XP_008375896.1| (PREDICTED: uncharacterized protein LOC103439122 [Malus domestica]) HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53 Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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