Csa4G288100 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G288100
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipoxygenase; contains IPR000907 (Lipoxygenase), IPR008976 (Lipase/lipooxygenase, PLAT/LH2)
LocationChr4 : 11201046 .. 11201739 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACATTATAGGTCAAACCAAGCTTCGTTTGCGTATCAAAAGTCATTTATTCATAGAAATGTTGAACCTGTATTAGTCCATCTACATCAAGGGTTAAAACCAAATCCTTCTCATATTGGTTTCACCAATAATCTCAGTGTTGTTAAAGAGTCATCCTTTGCTATGACTTCCATCAACAGGCCAATTTCAATCAAAGTCGTGGTTACAATCAAACAGTGCATCAATGATTTGTTTCCACATTTTGGGTTCAAACCAAGGCTCGACCATATCACTAATTGGTGGCCAAGTCAAGCTCTTGGTTTGGAGTTTATTAGCAATGAGATGGATCCAAGTATGTTAATTTACTTAGCTTTATATATCAATGTTTTTATATTTAAGACATAGATAATTTAGACTTCATATATATATAATGTATTGATCAGCAACAGGATTGGAGAAGGGAACAACAAAAGCTTATGCAGAGAGAGTGAAGAGAAAGGATAACGAGGTAATTGTGTATGAGACAAAGGTGGTAATTCCAGCAGATTTTGGTGCAATTGGAGGAGTTTTGGTTGAGAATGAACACAACAAAGAGATGTTTCTTATGGACATTGTGATTCATGGAATTCCAACACAATATCATCTTCATTTCCCATGCAATTCTTGGATTCAGAGCAAAGATAGAAGAATCTTCTTCACCACTAAGGTCATTTAA

mRNA sequence

ATGACTTCCATCAACAGGCCAATTTCAATCAAAGTCGTGGTTACAATCAAACAGTGCATCAATGATTTGTTTCCACATTTTGGGTTCAAACCAAGGCTCGACCATATCACTAATTGGTGGCCAAGTCAAGCTCTTGGTTTGGAGTTTATTAGCAATGAGATGGATCCAACAACAGGATTGGAGAAGGGAACAACAAAAGCTTATGCAGAGAGAGTGAAGAGAAAGGATAACGAGGTAATTGTGTATGAGACAAAGGTGGTAATTCCAGCAGATTTTGGTGCAATTGGAGGAGTTTTGGTTGAGAATGAACACAACAAAGAGATGTTTCTTATGGACATTGTGATTCATGGAATTCCAACACAATATCATCTTCATTTCCCATGCAATTCTTGGATTCAGAGCAAAGATAGAAGAATCTTCTTCACCACTAAGGTCATTTAA

Coding sequence (CDS)

ATGACTTCCATCAACAGGCCAATTTCAATCAAAGTCGTGGTTACAATCAAACAGTGCATCAATGATTTGTTTCCACATTTTGGGTTCAAACCAAGGCTCGACCATATCACTAATTGGTGGCCAAGTCAAGCTCTTGGTTTGGAGTTTATTAGCAATGAGATGGATCCAACAACAGGATTGGAGAAGGGAACAACAAAAGCTTATGCAGAGAGAGTGAAGAGAAAGGATAACGAGGTAATTGTGTATGAGACAAAGGTGGTAATTCCAGCAGATTTTGGTGCAATTGGAGGAGTTTTGGTTGAGAATGAACACAACAAAGAGATGTTTCTTATGGACATTGTGATTCATGGAATTCCAACACAATATCATCTTCATTTCCCATGCAATTCTTGGATTCAGAGCAAAGATAGAAGAATCTTCTTCACCACTAAGGTCATTTAA

Protein sequence

MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFPCNSWIQSKDRRIFFTTKVI*
Homology
[Close]
BLAST of Csa4G288100 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-18
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           ++S  +   +K VVT+++ +N           LD I +    ++L L  ++ E+D  TG+
Sbjct: 63  LSSTEKATGVKAVVTVQKQVN-----LNLSRGLDDIGDLL-GKSLLLWIVAAELDHKTGI 122

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120
           EK   +AYA R +  D +   YE   VIP DFG +G +L+ENEH+KEM++ +IVI G   
Sbjct: 123 EKPGIRAYAHRGRDVDGDTH-YEADFVIPQDFGEVGAILIENEHHKEMYVKNIVIDGF-V 182

Query: 121 QYHLHFPCNSWIQSK----DRRIFFTTK 145
              +   CNSW+ SK    D+RIFFT K
Sbjct: 183 HGKVEITCNSWVHSKFDNPDKRIFFTNK 202

[Close]
BLAST of Csa4G288100 vs. Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-15
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPH-FGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTK 67
           + +K V TIK  + +L       +  +         ++L LE +S+E+D  TG EK T +
Sbjct: 84  VRVKAVATIKVTVGELINRSIDIRDLI--------GRSLSLELVSSELDAKTGKEKATVR 143

Query: 68  AYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVI---HGIPTQYH 127
           +YA  V   D+ V+ YE    +P+ FG IG ++V NE  +EMFL DI +    G      
Sbjct: 144 SYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTV 203

Query: 128 LHFPCNSWIQSK--------DRRIFFTTK 145
           L   CNSW+Q K         +RIFF  K
Sbjct: 204 LPIRCNSWVQPKSVGDEGTPSKRIFFANK 224

[Close]
BLAST of Csa4G288100 vs. Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           + +K V TIK  +  L         +D+I +    ++L LE +S+E++  TG +K T  +
Sbjct: 96  VKVKAVATIKVTVEGLLNSLRPSKAIDNIRDLI-GRSLFLELVSSELEAKTGKKKATVHS 155

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVI---HGIPTQYHL 127
           YA +V   D+ V+ YE    +P  FG IG V+V NE  +EMFL D+ +    G      L
Sbjct: 156 YAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVL 215

Query: 128 HFPCNSWIQSKD--------RRIFF 142
              CNSW+Q K         +RIFF
Sbjct: 216 PIRCNSWVQPKSSIDEGTPGKRIFF 239

[Close]
BLAST of Csa4G288100 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           +T+  R +++  +VT  Q    ++   G    LD I + +  + L LE +S+E+DP TG 
Sbjct: 63  VTTKERALTVTAIVTA-QVPTSVYVARG----LDDIQDLF-GKTLLLELVSSELDPKTGR 122

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDI-VIHGIP 120
           E+   K +A    ++      YE K+ +PA FG +G VLVENEH++EMF+ DI +I G  
Sbjct: 123 ERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGD 182

Query: 121 TQYHLHFPCNSWIQSK----DRRIFFTTK 145
               + F   SW+ SK    + R FFT K
Sbjct: 183 ESTAITFDVASWVHSKFDDPEPRAFFTVK 201

[Close]
BLAST of Csa4G288100 vs. Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 47  LEFISNEMDPTTGLEKGTTKAYAERVKRKDN---EVIVYETKVVIPADFGAIGGVLVENE 106
           LE IS ++DP T L K +  A  +   +K     E + Y  +  + A FG+ G + V N+
Sbjct: 121 LELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNK 180

Query: 107 HNKEMFLMDIVIHGIPTQYHLHFPCNSWIQSK----DRRIFFTTK 145
           H KE FL  I I G      +HFPCNSW+QS+    D+RIFFT +
Sbjct: 181 HQKEFFLESITIEGFALG-PVHFPCNSWVQSQKDHPDKRIFFTNQ 224

[Close]
BLAST of Csa4G288100 vs. TrEMBL
Match: A0A0A0KZ97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G288100 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.6e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL
Sbjct: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120
           EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT
Sbjct: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120

Query: 121 QYHLHFPCNSWIQSKDRRIFFTTKVI 147
           QYHLHFPCNSWIQSKDRRIFFTTKVI
Sbjct: 121 QYHLHFPCNSWIQSKDRRIFFTTKVI 146

[Close]
BLAST of Csa4G288100 vs. TrEMBL
Match: M5W1M2_PRUPE (Lipoxygenase OS=Prunus persica GN=PRUPE_ppa000968mg PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           IS+K  +T+   +     H G K  LD IT+    Q+L LE +S E+DP TGLEK     
Sbjct: 117 ISVKATITVTLTVGGFLSHLGLKRGLDDITDML-GQSLLLELVSAELDPKTGLEKEKVAG 176

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           +A + +RK+ E+I YET   +P  FG +G VLVENEH+KEMFL DIV+ G+P    +H  
Sbjct: 177 FAHKSRRKEGEII-YETDFKVPVHFGEVGAVLVENEHHKEMFLKDIVLDGLP-YGSVHLS 236

Query: 128 CNSWIQSK----DRRIFFTTK 145
           CNSW+ SK    ++R+FFT K
Sbjct: 237 CNSWVHSKYDNPEKRVFFTNK 254

[Close]
BLAST of Csa4G288100 vs. TrEMBL
Match: B9HPT1_POPTR (Lipoxygenase OS=Populus trichocarpa GN=POPTR_0009s02750g PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           + +K  VT+K  I  +F + G    LD +T  +    L LE +S+++DP TGLEK T KA
Sbjct: 69  VKVKATVTVKVTIGGIFSNIGLTVPLDELTEVFGKSFL-LELVSSQLDPNTGLEKETIKA 128

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           YA +  +KD+EV  YETK  +PA FGA+G VLVEN+H+KE+FL DIV+ G P    ++  
Sbjct: 129 YAHKASQKDDEV-KYETKFTVPAGFGAVGAVLVENQHHKEIFLKDIVLEGFPNG-PVNVE 188

Query: 128 CNSWIQSK----DRRIFFTTK 145
           C+SW  SK     +RIFF  K
Sbjct: 189 CDSWAHSKYDDSKKRIFFANK 206

[Close]
BLAST of Csa4G288100 vs. TrEMBL
Match: S4UKZ5_MALDO (Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.3e-24
Identity = 65/141 (46.10%), Postives = 85/141 (60.28%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           IS+K  +T+   +     H G    LD IT+    Q+L LE +S E+DP TG EK     
Sbjct: 107 ISVKATLTVTLTVGGFLSHIGLARGLDDITDLL-GQSLLLELVSAELDPKTGEEKEKVAG 166

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           YA R +R++ E+I YET   +P DFG IG +LVENEH KEMFL +IV+ G+P    +H  
Sbjct: 167 YAHRSRRQEGEII-YETDFKVPVDFGEIGAILVENEHRKEMFLKEIVVDGLPCG-SVHHS 226

Query: 128 CNSWIQSK----DRRIFFTTK 145
           CNSWI SK     +R+FFT K
Sbjct: 227 CNSWIHSKYDNPAKRVFFTNK 244

[Close]
BLAST of Csa4G288100 vs. TrEMBL
Match: S4UKU6_MALDO (Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.3e-24
Identity = 65/141 (46.10%), Postives = 85/141 (60.28%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           IS+K  +T+   +     H G    LD IT+    Q+L LE +S E+DP TG EK     
Sbjct: 107 ISVKATLTVTLTVGGFLSHIGLARGLDDITDLL-GQSLLLELVSAELDPKTGEEKEKVAG 166

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           YA R +R++ E+I YET   +P DFG IG +LVENEH KEMFL +IV+ G+P    +H  
Sbjct: 167 YAHRSRRQEGEII-YETDFKVPVDFGEIGAILVENEHRKEMFLKEIVVDGLPCG-SVHHS 226

Query: 128 CNSWIQSK----DRRIFFTTK 145
           CNSWI SK     +R+FFT K
Sbjct: 227 CNSWIHSKYDNPAKRVFFTNK 244

[Close]
BLAST of Csa4G288100 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 47  LEFISNEMDPTTGLEKGTTKAYAERVKRKDN---EVIVYETKVVIPADFGAIGGVLVENE 106
           LE IS ++DP T L K +  A  +   +K     E + Y  +  + A FG+ G + V N+
Sbjct: 121 LELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNK 180

Query: 107 HNKEMFLMDIVIHGIPTQYHLHFPCNSWIQSK----DRRIFFTTK 145
           H KE FL  I I G      +HFPCNSW+QS+    D+RIFFT +
Sbjct: 181 HQKEFFLESITIEGFALG-PVHFPCNSWVQSQKDHPDKRIFFTNQ 224

[Close]
BLAST of Csa4G288100 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 38/105 (36.19%), Postives = 54/105 (51.43%), Query Frame = 1 

Query: 47  LEFISNEMDPTTGLEKGTTKAYAERVKRKDN---EVIVYETKVVIPADFGAIGGVLVENE 106
           LE +S ++DP T   K +  A  +   +K N   E + Y  +  + + FG+ G + V N+
Sbjct: 127 LELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNK 186

Query: 107 HNKEMFLMDIVIHGIPTQYHLHFPCNSWIQSK----DRRIFFTTK 145
           H KE FL  I I G      +HFPCNSW+QS+     +RI FT +
Sbjct: 187 HQKEFFLESITIEGFACG-PVHFPCNSWVQSQKDHPSKRILFTNQ 230

[Close]
BLAST of Csa4G288100 vs. NCBI nr
Match: gi|700198981|gb|KGN54139.1| (hypothetical protein Csa_4G288100 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.2e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL
Sbjct: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120
           EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT
Sbjct: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120

Query: 121 QYHLHFPCNSWIQSKDRRIFFTTKVI 147
           QYHLHFPCNSWIQSKDRRIFFTTKVI
Sbjct: 121 QYHLHFPCNSWIQSKDRRIFFTTKVI 146

[Close]
BLAST of Csa4G288100 vs. NCBI nr
Match: gi|449448964|ref|XP_004142235.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 4.4e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL
Sbjct: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120
           EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT
Sbjct: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120

Query: 121 QYHLHFPCNSWIQSKDRRIFFTTK 145
           QYHLHFPCNSWIQSKDRRIFFTTK
Sbjct: 121 QYHLHFPCNSWIQSKDRRIFFTTK 144

[Close]
BLAST of Csa4G288100 vs. NCBI nr
Match: gi|659098038|ref|XP_008449946.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-72
Identity = 132/144 (91.67%), Postives = 140/144 (97.22%), Query Frame = 1 

Query: 1   MTSINRPISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGL 60
           MTSINRPIS+KVVVTIK+CIN+LFPHFGFKPRLDHITNWW SQAL LEFIS EMDPTTGL
Sbjct: 60  MTSINRPISVKVVVTIKRCINELFPHFGFKPRLDHITNWWTSQALRLEFISVEMDPTTGL 119

Query: 61  EKGTTKAYAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPT 120
           EKGTTKAYAE+VKR+DNEVIVYETKVV+PADFGAIGGVLVENE NKE+FLMDIVIHGIPT
Sbjct: 120 EKGTTKAYAEKVKREDNEVIVYETKVVLPADFGAIGGVLVENERNKELFLMDIVIHGIPT 179

Query: 121 QYHLHFPCNSWIQSKDRRIFFTTK 145
           QYHLHFPCNSWIQSKD+RIFFTTK
Sbjct: 180 QYHLHFPCNSWIQSKDKRIFFTTK 203

[Close]
BLAST of Csa4G288100 vs. NCBI nr
Match: gi|595832234|ref|XP_007206438.1| (hypothetical protein PRUPE_ppa000968mg [Prunus persica])

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-25
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           IS+K  +T+   +     H G K  LD IT+    Q+L LE +S E+DP TGLEK     
Sbjct: 117 ISVKATITVTLTVGGFLSHLGLKRGLDDITDML-GQSLLLELVSAELDPKTGLEKEKVAG 176

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           +A + +RK+ E+I YET   +P  FG +G VLVENEH+KEMFL DIV+ G+P    +H  
Sbjct: 177 FAHKSRRKEGEII-YETDFKVPVHFGEVGAVLVENEHHKEMFLKDIVLDGLP-YGSVHLS 236

Query: 128 CNSWIQSK----DRRIFFTTK 145
           CNSW+ SK    ++R+FFT K
Sbjct: 237 CNSWVHSKYDNPEKRVFFTNK 254

[Close]
BLAST of Csa4G288100 vs. NCBI nr
Match: gi|566185986|ref|XP_002314229.2| (hypothetical protein POPTR_0009s02750g [Populus trichocarpa])

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 1 

Query: 8   ISIKVVVTIKQCINDLFPHFGFKPRLDHITNWWPSQALGLEFISNEMDPTTGLEKGTTKA 67
           + +K  VT+K  I  +F + G    LD +T  +    L LE +S+++DP TGLEK T KA
Sbjct: 69  VKVKATVTVKVTIGGIFSNIGLTVPLDELTEVFGKSFL-LELVSSQLDPNTGLEKETIKA 128

Query: 68  YAERVKRKDNEVIVYETKVVIPADFGAIGGVLVENEHNKEMFLMDIVIHGIPTQYHLHFP 127
           YA +  +KD+EV  YETK  +PA FGA+G VLVEN+H+KE+FL DIV+ G P    ++  
Sbjct: 129 YAHKASQKDDEV-KYETKFTVPAGFGAVGAVLVENQHHKEIFLKDIVLEGFPNG-PVNVE 188

Query: 128 CNSWIQSK----DRRIFFTTK 145
           C+SW  SK     +RIFF  K
Sbjct: 189 CDSWAHSKYDDSKKRIFFANK 206

The following BLAST results are available for this feature:
BLAST of Csa4G288100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX21_SOLTU4.3e-1837.84Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=... [more]
LOXC1_ORYSJ3.4e-1534.23Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV... [more]
LOXC2_ORYSJ1.7e-1434.48Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX... [more]
LOX23_HORVU1.1e-1335.57Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1[more]
LOX3_ARATH2.1e-1240.00Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1[more]
BLAST of Csa4G288100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ97_CUCSA3.6e-80100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G288100 PE=4 SV=1[more]
M5W1M2_PRUPE2.0e-2546.10Lipoxygenase OS=Prunus persica GN=PRUPE_ppa000968mg PE=3 SV=1[more]
B9HPT1_POPTR1.3e-2446.10Lipoxygenase OS=Populus trichocarpa GN=POPTR_0009s02750g PE=3 SV=2[more]
S4UKZ5_MALDO6.3e-2446.10Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1[more]
S4UKU6_MALDO6.3e-2446.10Lipoxygenase OS=Malus domestica GN=LOX6b PE=2 SV=1[more]
BLAST of Csa4G288100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17420.11.2e-1340.00 lipoxygenase 3[more]
AT1G72520.11.4e-1136.19 PLAT/LH2 domain-containing lipoxygenase family protein[more]
BLAST of Csa4G288100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198981|gb|KGN54139.1|5.2e-80100.00hypothetical protein Csa_4G288100 [Cucumis sativus][more]
gi|449448964|ref|XP_004142235.1|4.4e-79100.00PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus][more]
gi|659098038|ref|XP_008449946.1|1.8e-7291.67PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo][more]
gi|595832234|ref|XP_007206438.1|2.8e-2546.10hypothetical protein PRUPE_ppa000968mg [Prunus persica][more]
gi|566185986|ref|XP_002314229.2|1.8e-2446.10hypothetical protein POPTR_0009s02750g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR001024PLAT/LH2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process
biological_process GO:1901360 organic cyclic compound metabolic process
biological_process GO:0051707 response to other organism
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0072330 monocarboxylic acid biosynthetic process
biological_process GO:0008610 lipid biosynthetic process
biological_process GO:0046483 heterocycle metabolic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0051186 cofactor metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044434 chloroplast part
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G288100.1Csa4G288100.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 47..144
score: 5.1
IPR001024PLAT/LH2 domainGENE3DG3DSA:2.60.60.20coord: 31..145
score: 1.7
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 83..141
score: 2.
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 8..143
score: 7.3
IPR001024PLAT/LH2 domainPROFILEPS50095PLATcoord: 25..146
score: 11
IPR001024PLAT/LH2 domainunknownSSF49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 10..144
score: 1.06
NoneNo IPR availablePANTHERPTHR11771:SF51SUBFAMILY NOT NAMEDcoord: 47..144
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G288100MELO3C014629.2Melon (DHL92) v3.6.1cumedB279
Csa4G288100CSPI04G13540Wild cucumber (PI 183967)cpicuB181
Csa4G288100CsGy4G013150Cucumber (Gy14) v2cgybcuB167
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G288100Watermelon (97103) v2cuwmbB287
Csa4G288100Wax gourdcuwgoB390
Csa4G288100Cucumber (Gy14) v1cgycuB055
Csa4G288100Cucurbita maxima (Rimu)cmacuB549
Csa4G288100Cucurbita moschata (Rifu)cmocuB538
Csa4G288100Cucurbita moschata (Rifu)cmocuB596
Csa4G288100Melon (DHL92) v3.5.1cumeB295
Csa4G288100Watermelon (Charleston Gray)cuwcgB292
Csa4G288100Watermelon (97103) v1cuwmB347
Csa4G288100Bottle gourd (USVL1VR-Ls)culsiB246
Csa4G288100Silver-seed gourdcarcuB0552