Csa4G287000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G287000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipoxygenase; contains IPR000907 (Lipoxygenase), IPR027433 (Lipoxygenase, domain 3)
LocationChr4 : 11142573 .. 11143143 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCGCTGCTTCCAAAATTAATCTTCAATGTAATGTATCATCCATTGTTTGCTCTCATCAACCACCTGCAGCTGCCATTAATTCATCAGATGTGCCCAGTAGTACTCTCGTTGAACTCCCACCACCAGAGTCCTATAAGAGTGAGTATATAGGTTTATGATATATAAGACACTTTAATTTCAAAGTGCATGCATGTGACAACACTAAATTATATGCCAAAACCTTTGTTGTTTGATTATTATACTTCATTAATTTTCTCTCAGGAGACCAATACAATTGGCTGAGTGATATTGAATTTGCTAGACTCACACTTGCTGGTCTAAACCCTTACTCTATACAGCTAGTCAAGGTATGTGACAATTAACTCACAATCAGTTAATAATATATCTTTATAAATATGAATTAATATCTCTAATTTAATTATTCTCCTGATAATAATTGATCAGAGTTTGCCGTTTATGAGTAAGCTTGACGAGGGAGATTATGGACCTCGAGAATCAAAATTCACTCCCGAACGAGTTCAAGAATTACTTGGATGTTGCATCACAGTTGGAAAGGTGAATTAA

mRNA sequence

ATGCCTTCCGCTGCTTCCAAAATTAATCTTCAATGTAATGTATCATCCATTGTTTGCTCTCATCAACCACCTGCAGCTGCCATTAATTCATCAGATGTGCCCAGTAGTACTCTCGTTGAACTCCCACCACCAGAGTCCTATAAGAGAGACCAATACAATTGGCTGAGTGATATTGAATTTGCTAGACTCACACTTGCTGGTCTAAACCCTTACTCTATACAGCTAGTCAAGAGTTTGCCGTTTATGAGTAAGCTTGACGAGGGAGATTATGGACCTCGAGAATCAAAATTCACTCCCGAACGAGTTCAAGAATTACTTGGATGTTGCATCACAGTTGGAAAGGTGAATTAA

Coding sequence (CDS)

ATGCCTTCCGCTGCTTCCAAAATTAATCTTCAATGTAATGTATCATCCATTGTTTGCTCTCATCAACCACCTGCAGCTGCCATTAATTCATCAGATGTGCCCAGTAGTACTCTCGTTGAACTCCCACCACCAGAGTCCTATAAGAGAGACCAATACAATTGGCTGAGTGATATTGAATTTGCTAGACTCACACTTGCTGGTCTAAACCCTTACTCTATACAGCTAGTCAAGAGTTTGCCGTTTATGAGTAAGCTTGACGAGGGAGATTATGGACCTCGAGAATCAAAATTCACTCCCGAACGAGTTCAAGAATTACTTGGATGTTGCATCACAGTTGGAAAGGTGAATTAA

Protein sequence

MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN*
Homology
[Close]
BLAST of Csa4G287000 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1 

Query: 44  PESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQ 103
           P+  +RD+++W  D+EFAR TLAGLNPYSI+LV   P  SKLD   YGP ES+ T E ++
Sbjct: 386 PQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGPPESEITKELIE 445

Query: 104 ELLGCCITV 113
           + +G  +TV
Sbjct: 446 KEIGNYMTV 454

[Close]
BLAST of Csa4G287000 vs. Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 32  DVPSSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYG 91
           D P+  ++    P + ++D++ WL D EFAR TLAG+NPY+I+LV+  P  SKLD   YG
Sbjct: 399 DTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYG 458

Query: 92  PRESKFTPERVQELLGCCITV 113
           P ES  T + ++E +   +TV
Sbjct: 459 PAESAITADLLEEQMRRVMTV 479

[Close]
BLAST of Csa4G287000 vs. Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.7e-13
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1 

Query: 32  DVPSSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYG 91
           D P   ++    P + ++D++ WL D EFAR TLAG+NPY+I+LV+  P  SKLD   YG
Sbjct: 416 DSPGDKILLFDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYG 475

Query: 92  PRESKFTPERVQELLGCCITV 113
           P ES  T + ++E +   +TV
Sbjct: 476 PAESAITADLLEEQMRRVMTV 496

[Close]
BLAST of Csa4G287000 vs. Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = 1 

Query: 44  PESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQ 103
           PE + RD++ W  D EFAR T+AG+NP SIQLV   P  S LDE  YGP +S  T E V+
Sbjct: 415 PEIHDRDKFAWFRDEEFARQTIAGMNPMSIQLVTEFPIKSNLDEATYGPADSLITKEVVE 474

Query: 104 E 105
           E
Sbjct: 475 E 475

[Close]
BLAST of Csa4G287000 vs. Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-11
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1 

Query: 44  PESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQ 103
           PE +  D+  W  D EFAR TLAG+NP SIQLV  LP +SKLDE  YGP +S  T E ++
Sbjct: 414 PEIHDMDKLAWFRDEEFARQTLAGMNPLSIQLVTELPIVSKLDELKYGPADSLITKELIE 473

Query: 104 ELLGCCIT 112
           + +   +T
Sbjct: 474 KQINRIMT 481

[Close]
BLAST of Csa4G287000 vs. TrEMBL
Match: A0A0A0L0K3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287000 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 5.7e-60
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 60
           MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF
Sbjct: 1   MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 60

Query: 61  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN 117
           ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN
Sbjct: 61  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN 116

[Close]
BLAST of Csa4G287000 vs. TrEMBL
Match: A0A0A0KX73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287550 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-39
Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 1 

Query: 2   PSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 61
           PSAASK NLQ N++SI+ SH+PPA  + SSD PSSTLVELPPPESYKRD+YNWLSDIEFA
Sbjct: 182 PSAASKFNLQFNIASILSSHRPPA--LKSSDTPSSTLVELPPPESYKRDKYNWLSDIEFA 241

Query: 62  RLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPE 101
           RLTL GLNPYSIQLVKSLPFMSKLDEGDY PRESKFTPE
Sbjct: 242 RLTLVGLNPYSIQLVKSLPFMSKLDEGDYRPRESKFTPE 278

[Close]
BLAST of Csa4G287000 vs. TrEMBL
Match: A0A0A0KZ89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287020 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-36
Identity = 87/114 (76.32%), Postives = 94/114 (82.46%), Query Frame = 1 

Query: 2   PSAASKIN-LQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 61
           P AASKIN L  ++ S+V S+QPP   +NS D   S+ VELP PESYKRD+YNWLSDIEF
Sbjct: 164 PFAASKINQLPFDIPSLVSSNQPPP--LNSLDDEPSSSVELPLPESYKRDKYNWLSDIEF 223

Query: 62  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 115
           ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFT E VQELLGC I V K
Sbjct: 224 ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTHELVQELLGCRIKVCK 275

[Close]
BLAST of Csa4G287000 vs. TrEMBL
Match: A0A0A0L1V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287530 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 65/113 (57.52%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 2   PSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 61
           P A  K+ L  N+S+IV   +P   + ++S VPSS L+  PPPESY+RD+Y+WLSD EFA
Sbjct: 188 PHAPHKL-LTFNLSTIVTPDKPDLHSNSNSSVPSS-LLHYPPPESYRRDRYSWLSDTEFA 247

Query: 62  RLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 115
           R TLAGLNPYSIQLV  LP MS+LD   YGP+ES F   +VQEL+GC I V +
Sbjct: 248 RQTLAGLNPYSIQLVTRLPLMSELDPDTYGPQESAFNHTKVQELIGCSIEVNE 298

[Close]
BLAST of Csa4G287000 vs. TrEMBL
Match: A0A0A0KX68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286960 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-21
Identity = 57/105 (54.29%), Postives = 76/105 (72.38%), Query Frame = 1 

Query: 10  LQCNV-SSIVCSHQPPAAAINSSDV-PSSTLVELPPPESYKRDQYNWLSDIEFARLTLAG 69
           LQ N+ S++  S+QP    +    V P++ +++ PPPE+ KRD++NWLSD EFAR T+AG
Sbjct: 204 LQFNIISTLNASNQPAPPPVQPIPVQPNTPVIKFPPPEALKRDKFNWLSDSEFARQTIAG 263

Query: 70  LNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITV 113
           LNPY IQLVKS P  S+LD  +YGP+ES FT E VQ+L+G  ITV
Sbjct: 264 LNPYCIQLVKSWPLKSELDPVEYGPQESAFTTELVQKLIGSSITV 308

[Close]
BLAST of Csa4G287000 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 67.0 bits (162), Expect = 8.7e-12
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1 

Query: 38  LVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKF 97
           +++   P    RD+++WL D EFAR TLAGLNPYSIQLV+  P +SKLD   YG   S  
Sbjct: 378 ILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLI 437

Query: 98  TPERVQ 104
           T E V+
Sbjct: 438 TWEIVE 443

[Close]
BLAST of Csa4G287000 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-11
Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = 1 

Query: 35  SSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRE 94
           + TL++   P   K D++ WL D EF R  LAG+NP +I+L+K LP  S LD   YGP+E
Sbjct: 394 TETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQE 453

Query: 95  SKFTPE 101
           S  T E
Sbjct: 454 SVLTEE 459

[Close]
BLAST of Csa4G287000 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = 1 

Query: 39  VELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFT 98
           ++ P P+  K D+  W +D EFAR  LAGLNP  IQL+K  P  SKLD   YG + S  T
Sbjct: 345 LKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTIT 404

Query: 99  PERVQELL 107
              ++  L
Sbjct: 405 KSHIEHNL 412

[Close]
BLAST of Csa4G287000 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-09
Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 24  PAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMS 83
           P   +++    +  L++   P+   +D+  WL D EFAR  +AG+NP +I+ VK+ P +S
Sbjct: 389 PKVVVDTLQESTKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVS 448

Query: 84  KLDEGDYGPRESKFTPERV 103
            LD   YGP+ S  T + +
Sbjct: 449 NLDPKIYGPQHSALTDDHI 467

[Close]
BLAST of Csa4G287000 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 35  SSTLVELPPPESYKRDQYNWLSDIEFARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGP 93
           S  L+    P+   +D+Y WL D EFAR  +AG+NP +I+ V S P +S LD   YGP
Sbjct: 405 SEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGP 462

[Close]
BLAST of Csa4G287000 vs. NCBI nr
Match: gi|700198969|gb|KGN54127.1| (hypothetical protein Csa_4G287000 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 8.1e-60
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 60
           MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF
Sbjct: 1   MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 60

Query: 61  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN 117
           ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN
Sbjct: 61  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGKVN 116

[Close]
BLAST of Csa4G287000 vs. NCBI nr
Match: gi|778693093|ref|XP_004142238.2| (PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 

Query: 1   MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 60
           MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF
Sbjct: 267 MPSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEF 326

Query: 61  ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 115
           ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK
Sbjct: 327 ARLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 380

[Close]
BLAST of Csa4G287000 vs. NCBI nr
Match: gi|778693100|ref|XP_011653578.1| (PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 1 

Query: 2   PSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 61
           PSAASK NLQ N++SI+ SH+PPA  + SSD PSSTLVELPPPESYKRD+YNWLSDIEFA
Sbjct: 268 PSAASKFNLQFNIASILSSHRPPA--LKSSDTPSSTLVELPPPESYKRDKYNWLSDIEFA 327

Query: 62  RLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 115
           RLTL GLNPYSIQLVKSLPFMSKLDEGDY PRESKFTPE VQELLGC ITV K
Sbjct: 328 RLTLVGLNPYSIQLVKSLPFMSKLDEGDYRPRESKFTPEXVQELLGCYITVDK 378

[Close]
BLAST of Csa4G287000 vs. NCBI nr
Match: gi|659098040|ref|XP_008449947.1| (PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 1 

Query: 2   PSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 61
           P AASKINLQ N+SS+V SH+PPA  ++SSDVPSSTLVELPPPESYKRDQYNWLSDIEFA
Sbjct: 46  PFAASKINLQFNISSLVSSHRPPA--LSSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 105

Query: 62  RLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPERVQELLGCCITVGK 115
           RLTLAGLNPYSIQLV+ LPF S L+E DYGPR+SKFTPERV ELLGC ITV K
Sbjct: 106 RLTLAGLNPYSIQLVRDLPFKSTLEESDYGPRQSKFTPERVHELLGCRITVAK 156

[Close]
BLAST of Csa4G287000 vs. NCBI nr
Match: gi|700198975|gb|KGN54133.1| (hypothetical protein Csa_4G287550 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 1 

Query: 2   PSAASKINLQCNVSSIVCSHQPPAAAINSSDVPSSTLVELPPPESYKRDQYNWLSDIEFA 61
           PSAASK NLQ N++SI+ SH+PPA  + SSD PSSTLVELPPPESYKRD+YNWLSDIEFA
Sbjct: 182 PSAASKFNLQFNIASILSSHRPPA--LKSSDTPSSTLVELPPPESYKRDKYNWLSDIEFA 241

Query: 62  RLTLAGLNPYSIQLVKSLPFMSKLDEGDYGPRESKFTPE 101
           RLTL GLNPYSIQLVKSLPFMSKLDEGDY PRESKFTPE
Sbjct: 242 RLTLVGLNPYSIQLVKSLPFMSKLDEGDYRPRESKFTPE 278

The following BLAST results are available for this feature:
BLAST of Csa4G287000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX21_SOLTU2.0e-1352.17Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=... [more]
LOXC1_ORYSJ2.0e-1343.21Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV... [more]
LOXC2_ORYSJ9.7e-1343.21Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX... [more]
LOX21_HORVU1.8e-1154.10Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1[more]
LOX22_HORVU4.1e-1150.00Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1[more]
BLAST of Csa4G287000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0K3_CUCSA5.7e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287000 PE=4 SV=1[more]
A0A0A0KX73_CUCSA1.1e-3984.85Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287550 PE=4 SV=1[more]
A0A0A0KZ89_CUCSA1.1e-3676.32Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287020 PE=4 SV=1[more]
A0A0A0L1V5_CUCSA2.7e-2557.52Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287530 PE=4 SV=1[more]
A0A0A0KX68_CUCSA1.0e-2154.29Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286960 PE=4 SV=1[more]
BLAST of Csa4G287000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45140.18.7e-1251.52 lipoxygenase 2[more]
AT1G67560.19.7e-1146.97 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G55020.12.4e-0944.12 lipoxygenase 1[more]
AT1G17420.14.1e-0934.18 lipoxygenase 3[more]
AT1G72520.11.0e-0744.83 PLAT/LH2 domain-containing lipoxygenase family protein[more]
BLAST of Csa4G287000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198969|gb|KGN54127.1|8.1e-60100.00hypothetical protein Csa_4G287000 [Cucumis sativus][more]
gi|778693093|ref|XP_004142238.2|1.2e-58100.00PREDICTED: lipoxygenase 2, chloroplastic-like [Cucumis sativus][more]
gi|778693100|ref|XP_011653578.1|1.9e-4584.07PREDICTED: LOW QUALITY PROTEIN: lipoxygenase 2, chloroplastic-like [Cucumis sati... [more]
gi|659098040|ref|XP_008449947.1|1.6e-4482.30PREDICTED: lipoxygenase 2, chloroplastic-like, partial [Cucumis melo][more]
gi|700198975|gb|KGN54133.1|1.6e-3984.85hypothetical protein Csa_4G287550 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
IPR027433Lipoxygenase_dom_3
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G287000.1Csa4G287000.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 38..107
score: 2.7
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 33..112
score: 2.1
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..116
score: 17
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 34..107
score: 7.32
IPR027433Lipoxygenase, domain 3GENE3DG3DSA:4.10.372.10coord: 35..70
score: 3.
NoneNo IPR availablePANTHERPTHR11771:SF42PROTEIN C13C4.7coord: 38..107
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G287000CmoCh02G012640Cucurbita moschata (Rifu)cmocuB596
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G287000Cucurbita moschata (Rifu)cmocuB538
Csa4G287000Melon (DHL92) v3.5.1cumeB295
Csa4G287000Watermelon (Charleston Gray)cuwcgB292
Csa4G287000Watermelon (97103) v1cuwmB347
Csa4G287000Bottle gourd (USVL1VR-Ls)culsiB246
Csa4G287000Cucumber (Gy14) v2cgybcuB167
Csa4G287000Melon (DHL92) v3.6.1cumedB279
Csa4G287000Silver-seed gourdcarcuB0552
Csa4G287000Watermelon (97103) v2cuwmbB287
Csa4G287000Wax gourdcuwgoB390
Csa4G287000Cucumber (Gy14) v1cgycuB220
Csa4G287000Cucurbita maxima (Rimu)cmacuB549