Csa4G286980 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G286980
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLipoxygenase; contains IPR000907 (Lipoxygenase), IPR027433 (Lipoxygenase, domain 3)
LocationChr4 : 11135449 .. 11135809 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGAGATGGCATTGAAATCCCTCCCTCTTCTCACGACATTCTTAAATTTAATATAATCGCCACACTTAATTCATCAAATGATCAACCCGCCCCACCTTCTGTTGATCAGTCAAATATCATTCAACCGGACAGCACCAAACTTAGATTCCCTCCACCTGAGAGTCTCAAGAGTGAGTATAAATATTTTTGTATTAAAAAGTTCTTATTTTACATCAAGTATCATTGATGTTAATTTGATTAGACTTCAATTTCCAGGAGACAAGTTTCTTTGGCTTAGTGATGGTGAATTTGCAAGACAAACACTTGCTGGTCTCAACCCTTATTGTATACAGTTGGTCAAGGTGAGTGACGATTGA

mRNA sequence

ATGTTCAGAGATGGCATTGAAATCCCTCCCTCTTCTCACGACATTCTTAAATTTAATATAATCGCCACACTTAATTCATCAAATGATCAACCCGCCCCACCTTCTGTTGATCAGTCAAATATCATTCAACCGGACAGCACCAAACTTAGATTCCCTCCACCTGAGAGTCTCAAGAGAGACAAGTTTCTTTGGCTTAGTGATGGTGAATTTGCAAGACAAACACTTGCTGGTCTCAACCCTTATTGTATACAGTTGGTCAAGGTGAGTGACGATTGA

Coding sequence (CDS)

ATGTTCAGAGATGGCATTGAAATCCCTCCCTCTTCTCACGACATTCTTAAATTTAATATAATCGCCACACTTAATTCATCAAATGATCAACCCGCCCCACCTTCTGTTGATCAGTCAAATATCATTCAACCGGACAGCACCAAACTTAGATTCCCTCCACCTGAGAGTCTCAAGAGAGACAAGTTTCTTTGGCTTAGTGATGGTGAATTTGCAAGACAAACACTTGCTGGTCTCAACCCTTATTGTATACAGTTGGTCAAGGTGAGTGACGATTGA

Protein sequence

MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVKVSDD*
Homology
[Close]
BLAST of Csa4G286980 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-09
Identity = 40/86 (46.51%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTK--LRFPPPESLK 60
           ++ DGI +P   H    FN+I      ND    P V Q   +  D+T+  LRF  PE L+
Sbjct: 342 LYSDGIPLPVDGHGGNSFNVI------ND--VIPRVVQ---MIEDTTEHVLRFEVPEMLE 401

Query: 61  RDKFLWLSDGEFARQTLAGLNPYCIQ 85
           RD+F W  D EFARQTLAGLNP CI+
Sbjct: 402 RDRFSWFRDEEFARQTLAGLNPICIR 416

[Close]
BLAST of Csa4G286980 vs. Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 8.7e-09
Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSH-DILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKR 60
           +F DG+E+P     + L+  +   L    D PA                LRF  P ++++
Sbjct: 370 LFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKI-------------LRFETPANIQK 429

Query: 61  DKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           DKF WL D EFAR+TLAG+NPY I+LV+
Sbjct: 430 DKFAWLRDEEFARETLAGINPYAIELVR 444

[Close]
BLAST of Csa4G286980 vs. Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 1 

Query: 49  LRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           L+F  P  + RD+F WL D EFARQTLAGLNPY IQLV+
Sbjct: 379 LQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVE 417

[Close]
BLAST of Csa4G286980 vs. Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           +F DG+E+P     + K   + ++         P + +     P    L F  P ++++D
Sbjct: 387 LFEDGVELP----GVEKLGFLHSI--------VPRLLELLRDSPGDKILLFDTPANVQKD 446

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KF WL D EFAR+TLAG+NPY I+LV+
Sbjct: 447 KFAWLRDEEFARETLAGINPYAIELVR 461

[Close]
BLAST of Csa4G286980 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = 1 

Query: 49  LRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLV 87
           L F  P+ ++RDKF W  D EFARQTLAGLNPY I+LV
Sbjct: 381 LLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLV 418

[Close]
BLAST of Csa4G286980 vs. TrEMBL
Match: A0A0A0KWX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286980 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
          MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD
Sbjct: 1  MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60

Query: 61 KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD 92
          KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD
Sbjct: 61 KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD 91

[Close]
BLAST of Csa4G286980 vs. TrEMBL
Match: A0A0A0L1U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286940 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-26
Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGI +P + H+IL+FNI++TLN+SN QPAPP V Q   +QP++  ++FPPPE+LKRD
Sbjct: 169 MFRDGIALPSNPHEILQFNILSTLNASN-QPAPPPV-QPIPVQPNTPVIKFPPPEALKRD 228

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD 92
           KF WLSD EFARQT+AGLNPYCIQLVK + +
Sbjct: 229 KFNWLSDSEFARQTIAGLNPYCIQLVKTTSN 257

[Close]
BLAST of Csa4G286980 vs. TrEMBL
Match: A0A0A0KX68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286960 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-25
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGI  P + H+IL+FNII+TLN+SN QPAPP V Q   +QP++  ++FPPPE+LKRD
Sbjct: 189 MFRDGIAPPSNPHEILQFNIISTLNASN-QPAPPPV-QPIPVQPNTPVIKFPPPEALKRD 248

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KF WLSD EFARQT+AGLNPYCIQLVK
Sbjct: 249 KFNWLSDSEFARQTIAGLNPYCIQLVK 273

[Close]
BLAST of Csa4G286980 vs. TrEMBL
Match: A0A0A0L1V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287530 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-14
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFR+GI+ P + H +L FN+   +      P  P +  ++     S+ L +PPPES +RD
Sbjct: 180 MFREGIKAPHAPHKLLTFNLSTIVT-----PDKPDLHSNSNSSVPSSLLHYPPPESYRRD 239

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLV 87
           ++ WLSD EFARQTLAGLNPY IQLV
Sbjct: 240 RYSWLSDTEFARQTLAGLNPYSIQLV 260

[Close]
BLAST of Csa4G286980 vs. TrEMBL
Match: A0A0A0KX73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287550 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.0e-11
Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 1 

Query: 16  LKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRDKFLWLSDGEFARQTL 75
           L+FNI + L+S      PP++  S+   P ST +  PPPES KRDK+ WLSD EFAR TL
Sbjct: 190 LQFNIASILSSHR----PPALKSSDT--PSSTLVELPPPESYKRDKYNWLSDIEFARLTL 249

Query: 76  AGLNPYCIQLVK 88
            GLNPY IQLVK
Sbjct: 250 VGLNPYSIQLVK 255

[Close]
BLAST of Csa4G286980 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 56.6 bits (135), Expect = 9.3e-09
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 1 

Query: 49  LRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           L+F  P  + RD+F WL D EFARQTLAGLNPY IQLV+
Sbjct: 379 LQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVE 417

[Close]
BLAST of Csa4G286980 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 52.4 bits (124), Expect = 1.8e-07
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 1 

Query: 41  IIQPDSTK-LRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           I + D  K L+FP P+ +K DK  W +D EFAR+ LAGLNP  IQL+K
Sbjct: 336 IFRTDGQKFLKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLK 383

[Close]
BLAST of Csa4G286980 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.5e-06
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 1 

Query: 39  SNIIQPDSTKLRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           + I+    T L++  P  +K D+F WL D EF RQ LAG+NP  I+L+K
Sbjct: 388 NGILNVTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLK 436

[Close]
BLAST of Csa4G286980 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 46.6 bits (109), Expect = 9.6e-06
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 1 

Query: 45  DSTK--LRFPPPESLKRDKFLWLSDGEFARQTLAGLNPYCIQLVK 88
           +STK  L++  P+ L +DK  WL D EFARQ +AG+NP  I+ VK
Sbjct: 398 ESTKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVK 442

[Close]
BLAST of Csa4G286980 vs. NCBI nr
Match: gi|700198967|gb|KGN54125.1| (hypothetical protein Csa_4G286980 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 4.4e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
          MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD
Sbjct: 1  MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60

Query: 61 KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD 92
          KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD
Sbjct: 61 KFLWLSDGEFARQTLAGLNPYCIQLVKVSDD 91

[Close]
BLAST of Csa4G286980 vs. NCBI nr
Match: gi|778693090|ref|XP_011653577.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 9.3e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD
Sbjct: 335 MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 394

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KFLWLSDGEFARQTLAGLNPYCIQLVK
Sbjct: 395 KFLWLSDGEFARQTLAGLNPYCIQLVK 421

[Close]
BLAST of Csa4G286980 vs. NCBI nr
Match: gi|659097673|ref|XP_008449751.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGIEIPPS+H ILKFNI ATLNSS DQP+P SV Q +IIQ DSTK++FPPPE+LKRD
Sbjct: 336 MFRDGIEIPPSAHHILKFNINATLNSS-DQPSPLSV-QPDIIQSDSTKIKFPPPEALKRD 395

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KFLWLSD EFAR TLAGLNPY IQLV+
Sbjct: 396 KFLWLSDIEFARLTLAGLNPYSIQLVR 420

[Close]
BLAST of Csa4G286980 vs. NCBI nr
Match: gi|659097675|ref|XP_008449752.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGIEIPPS+H ILKFNI ATLNSS DQP+P SV Q +IIQ DSTK++FPPPE+LKRD
Sbjct: 335 MFRDGIEIPPSAHHILKFNINATLNSS-DQPSPLSV-QPDIIQSDSTKIKFPPPEALKRD 394

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KFLWLSD EFAR TLAGLNPY IQLV+
Sbjct: 395 KFLWLSDIEFARLTLAGLNPYSIQLVR 419

[Close]
BLAST of Csa4G286980 vs. NCBI nr
Match: gi|659097671|ref|XP_008449750.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 1 

Query: 1   MFRDGIEIPPSSHDILKFNIIATLNSSNDQPAPPSVDQSNIIQPDSTKLRFPPPESLKRD 60
           MFRDGIEIPPS+H ILKFNI ATLNSS DQP+P SV Q +IIQ DSTK++FPPPE+LKRD
Sbjct: 338 MFRDGIEIPPSAHHILKFNINATLNSS-DQPSPLSV-QPDIIQSDSTKIKFPPPEALKRD 397

Query: 61  KFLWLSDGEFARQTLAGLNPYCIQLVK 88
           KFLWLSD EFAR TLAGLNPY IQLV+
Sbjct: 398 KFLWLSDIEFARLTLAGLNPYSIQLVR 422

The following BLAST results are available for this feature:
BLAST of Csa4G286980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOX23_HORVU1.8e-0946.51Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1[more]
LOXC1_ORYSJ8.7e-0938.64Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV... [more]
LOX2_ARATH1.6e-0766.67Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1[more]
LOXC2_ORYSJ2.2e-0735.63Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX... [more]
LOX21_SOLTU1.1e-0665.79Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=... [more]
BLAST of Csa4G286980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWX7_CUCSA3.1e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286980 PE=4 SV=1[more]
A0A0A0L1U9_CUCSA4.2e-2665.93Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286940 PE=4 SV=1[more]
A0A0A0KX68_CUCSA1.6e-2570.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G286960 PE=4 SV=1[more]
A0A0A0L1V5_CUCSA6.3e-1448.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287530 PE=4 SV=1[more]
A0A0A0KX73_CUCSA5.0e-1156.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G287550 PE=4 SV=1[more]
BLAST of Csa4G286980 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45140.19.3e-0966.67 lipoxygenase 2[more]
AT1G55020.11.8e-0754.17 lipoxygenase 1[more]
AT1G67560.11.5e-0644.90 PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G17420.19.6e-0651.11 lipoxygenase 3[more]
BLAST of Csa4G286980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198967|gb|KGN54125.1|4.4e-45100.00hypothetical protein Csa_4G286980 [Cucumis sativus][more]
gi|778693090|ref|XP_011653577.1|9.3e-43100.00PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus][more]
gi|659097673|ref|XP_008449751.1|1.3e-2880.46PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X2 [Cucumi... [more]
gi|659097675|ref|XP_008449752.1|1.3e-2880.46PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X3 [Cucumi... [more]
gi|659097671|ref|XP_008449750.1|1.3e-2880.46PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucumi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000907LipOase
IPR013819LipOase_C
IPR027433Lipoxygenase_dom_3
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G286980.1Csa4G286980.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 49..86
score: 1.8
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 29..87
score: 1.3
IPR013819Lipoxygenase, C-terminalPROFILEPS51393LIPOXYGENASE_3coord: 1..91
score: 15
IPR013819Lipoxygenase, C-terminalunknownSSF48484Lipoxigenasecoord: 39..87
score: 8.11
IPR027433Lipoxygenase, domain 3GENE3DG3DSA:4.10.372.10coord: 2..80
score: 1.2
NoneNo IPR availablePANTHERPTHR11771:SF51SUBFAMILY NOT NAMEDcoord: 49..86
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G286980Cla008518Watermelon (97103) v1cuwmB347
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G286980Bottle gourd (USVL1VR-Ls)culsiB246
Csa4G286980Cucumber (Gy14) v2cgybcuB167
Csa4G286980Melon (DHL92) v3.6.1cumedB279
Csa4G286980Silver-seed gourdcarcuB0552
Csa4G286980Watermelon (97103) v2cuwmbB287
Csa4G286980Wax gourdcuwgoB390
Csa4G286980Cucumber (Gy14) v1cgycuB220
Csa4G286980Cucurbita maxima (Rimu)cmacuB549
Csa4G286980Cucurbita moschata (Rifu)cmocuB538
Csa4G286980Cucurbita moschata (Rifu)cmocuB596
Csa4G286980Melon (DHL92) v3.5.1cumeB295
Csa4G286980Watermelon (Charleston Gray)cuwcgB292