Csa4G153800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G153800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description60S ribosomal protein L6; contains IPR000915 (Ribosomal protein L6E), IPR005568 (Ribosomal protein L6, N-terminal), IPR008991 (Translation protein SH3-like domain)
LocationChr4 : 8297201 .. 8300330 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGTGTGGAGAGGTTTTTGTATAAGGTGTTAGGTGTTTTATGATTCTTAGGCGTTTGTCGTTGGCTTAGGCGAGATAGAATGTCAAGAACCTCTAAAGAGGTTATCTCAAGCATTGTGTCAAGCTAGGCAGAAAGTATGTGGAAGTTGCTAGGTGAGAACCACTACAAGAATGTCCTAGGCGTTTAGTACTAGGCGAGGAAGCTTGCTAGAGGTGTCTTGGCATTTTGGCTAAAGCATTTGAAGAAGTTATGGGATTAGTTTGTGCTATGCAAAATTTTAAATTTTAGGTTGTTATTATATCAAATGCAAAATTTTAGGAAATGATACAATTTTAAATTTAAATTTTGGAGGTATTCCAACTAAACTTTTAAAATAAAATAATAAAATAAATATTTATTATTATATCTAATCCGAAAAAAATGGAGGATAAATATAAAAAATGGTGTATTTGTATGATATAATAAAATGTTACTAAGAATTAACCAAACCTTAAGAAATGTATAATGAACAAATTATATTATTAATCATTATATGAGAAATTATGTATTTGTATGATATAATAAAATATTAGTGAGAATTAACCCAAACTTATCAAACCTAGAATGAAAGAATTATATTATCAATGACTTTATCGATAGTAAAAAAATATGAATTAAATAGCTATTACTATATATTAATAAAAATAAATGGTTAATCAATTCATTTGAAGTCTATAAATCTAAAAATTTAGTATAAATAATGTAGAAGATTTTGTTCTATATCCCATTTTTAATGGAAAAAATAAGGACGATTTTGCTAAAATTCAAACTATGTGAGTCGAGATTGGACGAAAGTTGACGTGAAATAAACGGGGCCTTCCAGTGTAATGGGCGTATAAACCCCTAAAATTTAATAATTTAACCCTTAATTTTCTCTCTAGGGCTTTTGGCGAGTAGAGGAACGAAGGCGACGGTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTTCATCTCTCTCGATCTTCTTTCTTTCGATGCTATGTTTTTACTCAATGTCTTGGAATCCATATTGCTTTCTGAGGAATTGGAGTAATTAGAGTCCATGCTGTAGCTATGGAGAAGCGGGAATTTCTGAAGAGAGATTAGTTTTACACTTGATTTAAGTTTTGGGTTTCGAATTGGGTGATCTGAAGTGAATTTTTGCTCATTTTTCTATTAAGCAATATTTGGTTCTGGGGGTGTGTTCATCTAACTTAGTTTCGTTGATTTTTATACTATTTACAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGTGTGTTTTGATGAATCTCTAATTGTCTGTCTTTATAAATTTTGTTTTGTTATCAAAAAGTGTTGGGGATTCTGTTCATGGGGTTAGTTTTTGTTTTTCCACATTCTTTGTGGACTTGTGTTAGATTTGCATTGGAAGTCTTATTTATGATATCTTAGCATCATAACAGTTATTTGCCTTAGGTTTACATATTATCTCAAATGCGTTACCTGCATAACAAGAAGGAAGAAGTTGGATACTTTGGGTTTTACATTTTGACAGTATTAATTGTTGAACCTCGAAAGCAGTTAATATTGAAATGTCTCACGTCTTGTATTCTGCCCATTTCTCCGGCCAATCGACTTTACATACCACTGAAATGCCTCATGCTTCCTTTTATGAATATATGCCCTGCTAATGGTCTTTTCATCCCATAAGTTTCTAAGCTTTATGTGCATTATCTTCTATTGTTTTCTTATGATGGTTGTGGGTACGGGTAGGGGTTAGTGTCTGAGTAGTCCTACATGTTTAGGAGAAAGGATGTATATAAAATAGTGATTGGCGGAGGCTATTGATTTCAAATTAGCAATTCTTGAACCTGCTAAGGATTATCTTAATTTGATTTTTGTCATTTTAGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTACTCATCCTGTTTTTGATTTGTCCAAATAGTTTAAAGTTTTATCATTTCTTTGTCCTGATTTGAGGTTGCCATTGTTACATGCAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTGTGGTTTCTGATACGCCTCTTGGGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTACATTACGTGGCTTCCTTTGACTGGTGAGAGTGATAAGACATGTAATTTTTGTTCAATTTCTGGCTGGTGAAATACTTGAGAAACACATTGATAAAGATAGATCGGTTGACTTACAATGGTGCATGGCCATGTTTGATTAGTATGCAACGTCAGAGAGTGGGCAATGTATGCTTGAATCTCATATATTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATATTTTCTTCTCTGCCCTTCACTTGTTTATCATATGATAATAATTTTACTGTTGGCATGTATGGAGCGATCTTGAAAAAATTAAAATCACTTTTGAATACTTTTACTCC

mRNA sequence

ATGGCCAAGTGTGGAGAGGCGTTTGTCGTTGGCTTAGGCGAGATAGAATGTCAAGAACCTCTAAAGAGGTTATCTCAAGCATTGTGTCAAGCTAGGCAGAAAGGCTTTTGGCGAGTAGAGGAACGAAGGCGACGGTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Coding sequence (CDS)

ATGGCCAAGTGTGGAGAGGCGTTTGTCGTTGGCTTAGGCGAGATAGAATGTCAAGAACCTCTAAAGAGGTTATCTCAAGCATTGTGTCAAGCTAGGCAGAAAGGCTTTTGGCGAGTAGAGGAACGAAGGCGACGGTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Protein sequence

MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF*
Homology
[Close]
BLAST of Csa4G153800 vs. Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.8e-106
Identity = 186/230 (80.87%), Postives = 205/230 (89.13%), Query Frame = 1 

Query: 55  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 114
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 115 FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 174
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 175 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 234
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 235 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           K  +PQEKK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of Csa4G153800 vs. Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 6.9e-105
Identity = 188/224 (83.93%), Postives = 199/224 (88.84%), Query Frame = 1 

Query: 61  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 120
           VSRNPEL+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 121 VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 180
           VKKPL+NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 181 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 240
           PLRRVNQ+YVIATSTKVDI+GVNVEKF DKYF K+  +K KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 241 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]
BLAST of Csa4G153800 vs. Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.6e-104
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1 

Query: 57  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 116
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 117 PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 176
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 177 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 236
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 237 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.6e-104
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1 

Query: 57  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 116
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 117 PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 176
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 177 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 236
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 237 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. Swiss-Prot
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5)

HSP 1 Score: 206.1 bits (523), Expect = 5.2e-52
Identity = 127/267 (47.57%), Postives = 164/267 (61.42%), Query Frame = 1 

Query: 48  ILRSSSMAPKTAR----VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKP 107
           + +SSS A K  +     SRNP L+RG+G+YSRS MY ++ L+  K K      + + K 
Sbjct: 36  VKKSSSKAKKLRKSKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKK 95

Query: 108 KADS--------------------PAEKPPKFYPADDVKKPLVNKRKPKP-----TKLRS 167
           K +                        K P++YP +DV + L++  K KP      +LRS
Sbjct: 96  KKEKVLATVTKTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRS 155

Query: 168 SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD 227
           SITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVD
Sbjct: 156 SITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVD 215

Query: 228 IAGVNVEK-FGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSI 285
           I+ V + K   D YF K+  +K +  EGE F+ EK EK  + +++K DQKAVDS +L  I
Sbjct: 216 ISKVKIPKHLTDAYFKKKPLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDSQILPKI 275

[Close]
BLAST of Csa4G153800 vs. TrEMBL
Match: A0A0A0KYA4_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 1.7e-158
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR 60
           MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR
Sbjct: 1   MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR 60

Query: 61  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 120
           VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD
Sbjct: 61  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 120

Query: 121 VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 180
           VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV
Sbjct: 121 VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 180

Query: 181 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 240
           PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ
Sbjct: 181 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 240

Query: 241 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]
BLAST of Csa4G153800 vs. TrEMBL
Match: A0A0A0L9J7_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-120
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of Csa4G153800 vs. TrEMBL
Match: A0A0A0K9V0_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.4e-112
Identity = 206/231 (89.18%), Postives = 217/231 (93.94%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKT RV+RNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA +PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPADDVKKPLVNKRK K TKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFK+NGVPLRRVNQSYVIATSTKVDI+GVN EKF DKYFSKE  +KKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALP EKKDDQKAVD+ L+KSIEAV +LK YL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]
BLAST of Csa4G153800 vs. TrEMBL
Match: A0A067H6Y6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026785mg PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.2e-110
Identity = 200/233 (85.84%), Postives = 217/233 (93.13%), Query Frame = 1 

Query: 54  MAPKTA--RVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEK 113
           MAPK    RVSRNPELIRG+GK+SRSKMYHKRGLWAIKAKNGGVFPRHD KPKA +PAEK
Sbjct: 1   MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDPKPKAAAPAEK 60

Query: 114 PPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLV 173
           PPKFYPADDVKKPLVNKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 120

Query: 174 TGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAE 233
           +GPFK+NGVPLRRVNQSYVI TSTKVDI+GVNV+KF DKYF+KEV +KKKKGE EFFE+E
Sbjct: 121 SGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERKKKKGENEFFESE 180

Query: 234 KEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           KEEK +LPQEKKDDQK+VD+ L+K+IEAV DLK YL ARFSL+AGMKPHELVF
Sbjct: 181 KEEKKSLPQEKKDDQKSVDAPLIKAIEAVPDLKAYLGARFSLRAGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. TrEMBL
Match: V4VI67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032636mg PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 5.0e-110
Identity = 199/233 (85.41%), Postives = 217/233 (93.13%), Query Frame = 1 

Query: 54  MAPKTA--RVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEK 113
           MAPK    RVSRNPELIRG+GK+SRSKMYHKRGLWAIKAKNGGVFPRHD KPKA +PAEK
Sbjct: 1   MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDPKPKAAAPAEK 60

Query: 114 PPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLV 173
           PPKFYPADDVKKPLVNKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 120

Query: 174 TGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAE 233
           +GPFK+NGVPLRRVNQ+YVI TSTKVDI+GVNV+KF DKYF+KEV +KKKKGE EFFE+E
Sbjct: 121 SGPFKINGVPLRRVNQTYVIGTSTKVDISGVNVDKFDDKYFAKEVERKKKKGENEFFESE 180

Query: 234 KEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           KEEK +LPQEKKDDQK+VD+ L+K+IEAV DLK YL ARFSL+AGMKPHELVF
Sbjct: 181 KEEKKSLPQEKKDDQKSVDTPLIKAIEAVPDLKAYLGARFSLRAGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. TAIR10
Match: AT1G18540.1 (AT1G18540.1 Ribosomal protein L6 family protein)

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-107
Identity = 186/230 (80.87%), Postives = 205/230 (89.13%), Query Frame = 1 

Query: 55  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 114
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 115 FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 174
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 175 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 234
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 235 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           K  +PQEKK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. TAIR10
Match: AT1G74050.1 (AT1G74050.1 Ribosomal protein L6 family protein)

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1 

Query: 57  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 116
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 117 PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 176
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 177 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 236
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 237 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. TAIR10
Match: AT1G74060.1 (AT1G74060.1 Ribosomal protein L6 family protein)

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1 

Query: 57  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 116
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 117 PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 176
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 177 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 236
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 237 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]
BLAST of Csa4G153800 vs. NCBI nr
Match: gi|700198671|gb|KGN53829.1| (hypothetical protein Csa_4G153800 [Cucumis sativus])

HSP 1 Score: 566.6 bits (1459), Expect = 2.4e-158
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR 60
           MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR
Sbjct: 1   MAKCGEAFVVGLGEIECQEPLKRLSQALCQARQKGFWRVEERRRRCQILRSSSMAPKTAR 60

Query: 61  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 120
           VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD
Sbjct: 61  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 120

Query: 121 VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 180
           VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV
Sbjct: 121 VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 180

Query: 181 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 240
           PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ
Sbjct: 181 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 240

Query: 241 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 241 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]
BLAST of Csa4G153800 vs. NCBI nr
Match: gi|778692213|ref|XP_004150161.2| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus])

HSP 1 Score: 459.9 bits (1182), Expect = 3.2e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of Csa4G153800 vs. NCBI nr
Match: gi|659121739|ref|XP_008460790.1| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo])

HSP 1 Score: 445.7 bits (1145), Expect = 6.2e-122
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of Csa4G153800 vs. NCBI nr
Match: gi|449463779|ref|XP_004149609.1| (PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.6e-120
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]
BLAST of Csa4G153800 vs. NCBI nr
Match: gi|659123670|ref|XP_008461779.1| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119
Identity = 219/231 (94.81%), Postives = 225/231 (97.40%), Query Frame = 1 

Query: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK ++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173
           KFYPADDVKKPLVNKRK KPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 285
           EKSALPQ+KKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

The following BLAST results are available for this feature:
BLAST of Csa4G153800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL61_ARATH4.8e-10680.8760S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1[more]
RL6_MESCR6.9e-10583.9360S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1[more]
RL63_ARATH2.6e-10481.1460S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=2 SV=1[more]
RL62_ARATH2.6e-10481.1460S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1[more]
RL6_RAT5.2e-5247.5760S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5[more]
BLAST of Csa4G153800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYA4_CUCSA1.7e-158100.0060S ribosomal protein L6 OS=Cucumis sativus GN=Csa_4G153800 PE=3 SV=1[more]
A0A0A0L9J7_CUCSA1.8e-12095.2460S ribosomal protein L6 OS=Cucumis sativus GN=Csa_3G698560 PE=3 SV=1[more]
A0A0A0K9V0_CUCSA1.4e-11289.1860S ribosomal protein L6 OS=Cucumis sativus GN=Csa_7G428940 PE=3 SV=1[more]
A0A067H6Y6_CITSI2.2e-11085.84Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026785mg PE=4 SV=1[more]
V4VI67_9ROSI5.0e-11085.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032636mg PE=4 SV=1[more]
BLAST of Csa4G153800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18540.12.7e-10780.87 Ribosomal protein L6 family protein[more]
AT1G74050.11.5e-10581.14 Ribosomal protein L6 family protein[more]
AT1G74060.11.5e-10581.14 Ribosomal protein L6 family protein[more]
BLAST of Csa4G153800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198671|gb|KGN53829.1|2.4e-158100.00hypothetical protein Csa_4G153800 [Cucumis sativus][more]
gi|778692213|ref|XP_004150161.2|3.2e-126100.00PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus][more]
gi|659121739|ref|XP_008460790.1|6.2e-12297.40PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo][more]
gi|449463779|ref|XP_004149609.1|2.6e-12095.24PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus][more]
gi|659123670|ref|XP_008461779.1|1.0e-11994.81PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR00091560S_ribosomal_L6E
IPR005568Ribosomal_L6_N
IPR008991Translation_prot_SH3-like_sf
IPR014722Rib_L2_dom2
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU108115cucumber EST collection version 3.0transcribed_cluster
CU120643cucumber EST collection version 3.0transcribed_cluster
CU121818cucumber EST collection version 3.0transcribed_cluster
CU166109cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G153800.1Csa4G153800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU121818CU121818transcribed_cluster
CU120643CU120643transcribed_cluster
CU108115CU108115transcribed_cluster
CU166109CU166109transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 54..284
score: 3.2E
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 177..284
score: 1.2
IPR00091560S ribosomal protein L6EPROSITEPS01170RIBOSOMAL_L6Ecoord: 178..196
scor
IPR005568Ribosomal protein L6, N-terminalPFAMPF03868Ribosomal_L6e_Ncoord: 59..112
score: 3.5
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 137..226
score: 1.93
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 137..224
score: 8.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G153800MELO3C023168Melon (DHL92) v3.5.1cumeB331
Csa4G153800ClCG04G000280Watermelon (Charleston Gray)cuwcgB305
Csa4G153800Lsi01G018790Bottle gourd (USVL1VR-Ls)culsiB260
Csa4G153800MELO3C023168.2Melon (DHL92) v3.6.1cumedB313
Csa4G153800Cla97C04G068640Watermelon (97103) v2cuwmbB302
Csa4G153800Bhi03G002133Wax gourdcuwgoB392
Csa4G153800CSPI04G10430Wild cucumber (PI 183967)cpicuB182
Csa4G153800Cucsa.038080Cucumber (Gy14) v1cgycuB011
Csa4G153800CsGy4G010120Cucumber (Gy14) v2cgybcuB165
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G153800Cucurbita moschata (Rifu)cmocuB662
Csa4G153800Cucurbita pepo (Zucchini)cpecuB074
Csa4G153800Silver-seed gourdcarcuB0214
Csa4G153800Cucurbita maxima (Rimu)cmacuB673