Csa4G127010 (gene) Cucumber (Chinese Long) v2

NameCsa4G127010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 7777876 .. 7779543 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGATGAGTGAAGATTATCAAATCCGATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGGTTTTTCTCTACTCTTTTCATTTTCTGGCTTCTTCATTTCACCTAAATTTTGACGGGTTCTGTATGATTATCTGATGGAGTAACCCAATTTGAAAATAACCCATGACTTCTATTCATTTATGTTTTTGTTTCCTTCAGTCTGTCTGTTGGCCACTGGTTTAGGGATTGTTTACGCATTTTTTTTTTTAATAAGAAACCTTATTTGGTTTCCACTTTATGATTTATGCTTTTTGGATGCATCCAGTACTTAAACATTACATTTTTGCATCTATCAGTGACATTTCATTGGGACTGCTGTTGTTCATATCTGAAAATTGCATTTTCTAATGGATACATTGTTTTTCCTTTAGATGTTTTCTCCTTTAATTCAACCTCAACCTTCTACATGATTCATCCATCCCTTCCCTTGGAGAAATTATACATGAGGGGCTAGAACAAATCTGACGTGTGATTGTACATTGATGTATATGAATGAGAATTTAAAAACTGTATTTTAAACTTCAATCGAATGTTGAAAACACATTAAACGATTATTAGAGGGTGGGCTATTCATTAACATAATTATAGTTCAACGATAGTTGACATATATACTCCTTTCCTCCTTTCCTTGTGGCCGTACCCCACATTTGTTGTAGTTAAGATAACACTCCTTTGTATTCAGTTTAAGCATAAACTTCGTAAAAGGTTTGATTACCATTTTAGTCTAGGATTTTGGTTCCATGTCATTTTGACCTTTTTACTTTCATATGTCCAAATTTGATCAATATACCTTCAATAACTCTTAAATTTTGACCTATTCAAGAATAGAAATTGTGTGAATATGGTTACAAAGTTGGAAAGGTAATTAGAGCCTAATGTTTCTTTTTCTTAATAGGGATTGTTTTAAAGATTCATTGGAAGTGCATGGAAATTTCCATTGGACACTTGAAACTACAATGACTATAATAAAACAATGGATGTAGTTGATTATGATGAATGTAATTAAGTATTTTCTCTGCCTGAACAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGATTTTTGTTCCTTGATCATTTCATTCTAATGCTCCTCAGATGGAATGAAGATGTACCAATTATTGTTCTTCTATTAAAGCATTACTCATTAATTTCTCCTCTCTTCCACAAAAGCAGATGTGGTGATGAAGATTTCTACTTGAAACAGATTTTTGAACTTTTTCCATATTTGGGTTTGTGAAAAGGACCTGTATTTACTAAAGAGAAGCCAAGCTAAAAGAATTTAAATAACAATGTTCTTCCCATCGATACTCTGTAAAGGTTGGCATAAATTAAGAATACGATATGGGG

mRNA sequence

ATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGA

Coding sequence (CDS)

ATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGA

Protein sequence

MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGVGSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT*
BLAST of Csa4G127010 vs. TrEMBL
Match: A0A0A0KZH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127010 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV
Sbjct: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT 115
           GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT
Sbjct: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT 114

BLAST of Csa4G127010 vs. TrEMBL
Match: M5WW56_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026503mg PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.1e-39
Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           M +IT SELAGF VGALL+CATI+AP++DAFIS+SQR SLGMCKRCG+LRMIACS+CKGV
Sbjct: 1   MNNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           G  K GG+FG+N++ DFYE++G  +S V SI CT CNA+G F CPDC
Sbjct: 61  GLIKEGGVFGLNLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDC 107

BLAST of Csa4G127010 vs. TrEMBL
Match: A0A059CM55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00827 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.3e-36
Identity = 69/107 (64.49%), Postives = 87/107 (81.31%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           ME+IT SE+AGF VG LL+CATI+APR+D+FIS+SQR SLGMC +CGDL++IACS C+GV
Sbjct: 1   MENITASEIAGFGVGTLLLCATIAAPRVDSFISASQRSSLGMCTKCGDLKLIACSTCRGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           GS K GGL G N + D Y++LG DES   + PCT+C A+G FRCP+C
Sbjct: 61  GSVKEGGLIGFNFVDDIYQSLGGDESGGKTTPCTKCRARGHFRCPNC 107

BLAST of Csa4G127010 vs. TrEMBL
Match: D7T7Y5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00490 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-35
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           ME+IT SELAGF VG LL+CATI+APR+D+FIS+SQRRSLGMCK+CGDL+MIACSKCKGV
Sbjct: 1   MENITASELAGFGVGTLLLCATIAAPRVDSFISASQRRSLGMCKKCGDLKMIACSKCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           GS K+G  F  N++ D Y++   DES V S  C  C  +G F CPDC
Sbjct: 61  GSVKAGAPFSFNLVDDLYQSFWGDESKVRSTACPSCQGRGHFSCPDC 107

BLAST of Csa4G127010 vs. TrEMBL
Match: A0A0E0KF13_ORYPU (Uncharacterized protein OS=Oryza punctata PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-34
Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           ME +T SE+AGF VGALLVCATI+A R+D FI+SSQRRSLGMCK+CGDLR++ACS+CKG+
Sbjct: 1   MEGLTSSEIAGFGVGALLVCATIAAQRVDGFIASSQRRSLGMCKKCGDLRIVACSQCKGI 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           GS + GG+F   +L D YE+LG +      +PCT C +KGR  CP+C
Sbjct: 61  GSVRKGGMFTFRMLDDIYESLGAETKTSNLVPCTNCRSKGRLLCPEC 107

BLAST of Csa4G127010 vs. TAIR10
Match: AT5G15802.1 (AT5G15802.1 unknown protein)

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-30
Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           M+S+T +E+AG AVGALL+ ATI+AP++DAFI++SQRRSLGMC++CGDL+ +AC +CKG 
Sbjct: 1   MQSLTSNEVAGLAVGALLLGATIAAPKVDAFIAASQRRSLGMCRKCGDLKNVACGRCKGT 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           G+ KSGG FG +           D SN  S+ C  C AKG F CP+C
Sbjct: 61  GTIKSGGFFGFS-----------DSSNTRSVACDNCQAKGCFPCPEC 96

BLAST of Csa4G127010 vs. NCBI nr
Match: gi|449438725|ref|XP_004137138.1| (PREDICTED: uncharacterized protein LOC101207960 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV
Sbjct: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT 115
           GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT
Sbjct: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT 114

BLAST of Csa4G127010 vs. NCBI nr
Match: gi|659129210|ref|XP_008464577.1| (PREDICTED: uncharacterized protein LOC103502417 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-53
Identity = 107/114 (93.86%), Postives = 109/114 (95.61%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV
Sbjct: 11  MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 70

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT 115
           GSTKSGGLFGINILADFYE+L   ESNVPSIPC RCNAKGRF+CPDC SQLTQT
Sbjct: 71  GSTKSGGLFGINILADFYESL--SESNVPSIPCMRCNAKGRFQCPDCSSQLTQT 122

BLAST of Csa4G127010 vs. NCBI nr
Match: gi|645248417|ref|XP_008230288.1| (PREDICTED: uncharacterized protein LOC103329576 [Prunus mume])

HSP 1 Score: 168.7 bits (426), Expect = 5.9e-39
Identity = 75/107 (70.09%), Postives = 92/107 (85.98%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           M++IT SELAGF VGALL+CATI+AP++DAFIS+SQR SLGMCKRCG+LRMIACS+CKGV
Sbjct: 1   MDNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           G  K GG+FG+N++ DFYE++G  +S V SI CT CNA+G F CPDC
Sbjct: 61  GLIKEGGVFGLNLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDC 107

BLAST of Csa4G127010 vs. NCBI nr
Match: gi|595957289|ref|XP_007216705.1| (hypothetical protein PRUPE_ppa026503mg [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           M +IT SELAGF VGALL+CATI+AP++DAFIS+SQR SLGMCKRCG+LRMIACS+CKGV
Sbjct: 1   MNNITASELAGFGVGALLLCATIAAPKVDAFISASQRSSLGMCKRCGNLRMIACSRCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           G  K GG+FG+N++ DFYE++G  +S V SI CT CNA+G F CPDC
Sbjct: 61  GLIKEGGVFGLNLIDDFYESVGGSDSKVRSISCTNCNARGHFSCPDC 107

BLAST of Csa4G127010 vs. NCBI nr
Match: gi|672181609|ref|XP_008811030.1| (PREDICTED: uncharacterized protein LOC103722305 [Phoenix dactylifera])

HSP 1 Score: 158.7 bits (400), Expect = 6.2e-36
Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 1

Query: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60
           ME++T SE+AGF VGALL+CATI+APR+DAFISSSQR SLGMCKRCGDLRMIACS+CKGV
Sbjct: 1   MENLTASEIAGFGVGALLLCATIAAPRVDAFISSSQRSSLGMCKRCGDLRMIACSQCKGV 60

Query: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDC 108
           GS K GG FG ++L DF+E  G        IPC +C +KGR +CPDC
Sbjct: 61  GSIKKGGPFGFSMLYDFFEPPGDGSMPKQLIPCKKCQSKGRMQCPDC 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZH5_CUCSA2.1e-59100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127010 PE=4 SV=1[more]
M5WW56_PRUPE7.1e-3970.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026503mg PE=4 SV=1[more]
A0A059CM55_EUCGR4.3e-3664.49Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00827 PE=4 SV=1[more]
D7T7Y5_VITVI4.7e-3565.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00490 PE=4 SV=... [more]
A0A0E0KF13_ORYPU2.4e-3461.68Uncharacterized protein OS=Oryza punctata PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G15802.11.8e-3055.14 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449438725|ref|XP_004137138.1|3.0e-59100.00PREDICTED: uncharacterized protein LOC101207960 [Cucumis sativus][more]
gi|659129210|ref|XP_008464577.1|4.2e-5393.86PREDICTED: uncharacterized protein LOC103502417 [Cucumis melo][more]
gi|645248417|ref|XP_008230288.1|5.9e-3970.09PREDICTED: uncharacterized protein LOC103329576 [Prunus mume][more]
gi|595957289|ref|XP_007216705.1|1.0e-3870.09hypothetical protein PRUPE_ppa026503mg [Prunus persica][more]
gi|672181609|ref|XP_008811030.1|6.2e-3668.22PREDICTED: uncharacterized protein LOC103722305 [Phoenix dactylifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005575 cellular_component
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU097930cucumber EST collection version 3.0transcribed_cluster
CU105854cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G127010.1Csa4G127010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097930CU097930transcribed_cluster
CU105854CU105854transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37760FAMILY NOT NAMEDcoord: 2..108
score: 1.1

The following gene(s) are paralogous to this gene:

None