CsGy4G009570 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAGCTGAGCCAATAGGCCTTTGTGATAAAATATCAAAAAGTTTATAAATTTGAATATATATAAAATGATAGTTTAATTTTAATGGATTTGGATGATGAGTGAAGATTATCAAATCCGATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGGTTTTTCTCTACTCTTTTCATTTTCTGGCTTCTTCATTTCACCTAAATTTTGACGGGTTCTGTATGATTATCTGATGGAGTAACCCAATTTGAAAATAACCCATGACTTCTATTCATTTATGTTTTTGTTTCCTTCAGTCTGTCTGTTGGCCACTGGTTTAGGGATTGTTTACGCATTTTTTTTTTTAATAAGAAACCTTATTTGGTTTCCACTTTATGATTTATGCTTTTTGGATGCATCCAGTACTTAAACATTACATTTTTGCATCTATCAGTGACATTTCATTGGGACTGCTGTTGTTCATATCTGAAAATTGCATTTTCTAATGGATACATTGTTTTTCCTTTAGATGTTTTCTCCTTTAATTCAACCTCAACCTTCTACATGATTCATCCATCCCTTCCCTTGGAGAAATTATACATGAGGGGCTAGAACAAATCTGACGTGTGATTGTACATTGATGTATATGAATGAGAATTTAAAAACTGTATTTTAAACTTCAATCGAATGTTGAAAACACATTAAACGATTATTAGAGGGTGGGCTATTCATTAACATAATTATAGTTCAACGATAGTTGACATATATACTCCTTTCCTCCTTTCCTTGTGGCCGTACCCCACATTTGTTGTAGTTAAGATAACACTCCTTTGTATTCAGTTTAAGCATAAACTTCGTAAAAGGTTTGATTACCATTTTAGTCTAGGATTTTGGTTCCATGTCATTTTGACCTTTTTACTTTCATATGTCCAAATTTGATCAATATACCTTCAATAACTCTTAAATTTTGACCTATTCAAGAATAGAAATTGTGTGAATATGGTTACAAAGTTGGAAAGGTAATTAGAGCCTAATGTTTCTTTTTCTTAATAGGGATTGTTTTAAAGATTCATTGGAAGTGCATGGAAATTTCCATTGGACACTTGAAACTACAATGACTATAATAAAACAATGGATGTAGTTGATTATGATGAATGTAATTAAGTATTTTCTCTGCCTGAACAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGATTTTTGTTCCTTGATCATTTCATTCTAATGCTCCTCAGATGGAATGAAGATGTACCAATTATTGTTCTTCTATTAAAGCATTACTCATTAATTTCTCCTCTCTTCCACAAAAGCAGATGTGGTGATGAAGATTTCTACTTGAAACAGATTTTTGAACTTTTTCCATATTTGGGTTTGTGAAAAGGACCTGTATTTACTAAAGAGAAGCCAAGCTAAAAGAATTTAAATAACAATGTTCTTCCCATCGATACTCTGTAAAGGTTGGCATAAATTAAGAATACGATATGGGGAATTTTACCTTATTTCCTTTTCCATTTTCTTTCAATTTCACCCAATTGTATCCTAAATTTAAGTGTTTAATTGATAGATCTTCAAGACCACATTAAAAAGTTATCTCGTAAACTACACAGATTACAC CACAGCTGAGCCAATAGGCCTTTGTGATAAAATATCAAAAAGTTTATAAATTTGAATATATATAAAATGATAGTTTAATTTTAATGGATTTGGATGATGAGTGAAGATTATCAAATCCGATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGATTTTTGTTCCTTGATCATTTCATTCTAATGCTCCTCAGATGGAATGAAGATGTACCAATTATTGTTCTTCTATTAAAGCATTACTCATTAATTTCTCCTCTCTTCCACAAAAGCAGATGTGGTGATGAAGATTTCTACTTGAAACAGATTTTTGAACTTTTTCCATATTTGGGTTTGTGAAAAGGACCTGTATTTACTAAAGAGAAGCCAAGCTAAAAGAATTTAAATAACAATGTTCTTCCCATCGATACTCTGTAAAGGTTGGCATAAATTAAGAATACGATATGGGGAATTTTACCTTATTTCCTTTTCCATTTTCTTTCAATTTCACCCAATTGTATCCTAAATTTAAGTGTTTAATTGATAGATCTTCAAGACCACATTAAAAAGTTATCTCGTAAACTACACAGATTACAC ATGGAGAGCATAACAGGGAGCGAACTTGCCGGTTTCGCAGTGGGCGCTTTGCTCGTTTGCGCCACCATTTCTGCCCCAAGAATCGACGCTTTCATCTCTTCTTCTCAGCGCAGATCCTTGGGCATGTGCAAAAGGTGTGGTGACCTGAGGATGATAGCATGTTCAAAATGTAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGCATTAACATTCTTGCTGACTTTTACGAAGCATTGGGCAAAGACGAATCAAATGTGCCTTCTATCCCGTGTACGAGATGCAACGCCAAGGGTCGCTTCCGATGTCCAGATTGCTGCTCTCAACTCACACAAACTTGA MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGVGSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLTQT
BLAST of CsGy4G009570 vs. NCBI nr
Match: XP_004137138.1 (PREDICTED: uncharacterized protein LOC101207960 [Cucumis sativus] >KGN53782.1 hypothetical protein Csa_4G127010 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CsGy4G009570 vs. NCBI nr
Match: XP_008464577.2 (PREDICTED: uncharacterized protein LOC103502417 [Cucumis melo]) HSP 1 Score: 213.8 bits (543), Expect = 3.1e-52 Identity = 107/114 (93.86%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of CsGy4G009570 vs. NCBI nr
Match: XP_022155031.1 (uncharacterized protein LOC111022174 [Momordica charantia]) HSP 1 Score: 207.6 bits (527), Expect = 2.2e-50 Identity = 96/110 (87.27%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of CsGy4G009570 vs. NCBI nr
Match: XP_022980758.1 (uncharacterized protein LOC111480031 [Cucurbita maxima]) HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46 Identity = 94/111 (84.68%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of CsGy4G009570 vs. NCBI nr
Match: XP_023528018.1 (uncharacterized protein LOC111791062 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.4 bits (490), Expect = 4.3e-46 Identity = 93/111 (83.78%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of CsGy4G009570 vs. TAIR10
Match: AT5G15802.1 (unknown protein) HSP 1 Score: 126.3 bits (316), Expect = 1.2e-29 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CsGy4G009570 vs. TrEMBL
Match: tr|A0A0A0KZH5|A0A0A0KZH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G127010 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.5e-58 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CsGy4G009570 vs. TrEMBL
Match: tr|A0A1S3CMA9|A0A1S3CMA9_CUCME (uncharacterized protein LOC103502417 OS=Cucumis melo OX=3656 GN=LOC103502417 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.1e-52 Identity = 107/114 (93.86%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of CsGy4G009570 vs. TrEMBL
Match: tr|A0A291ID70|A0A291ID70_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ParM-12 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38 Identity = 75/107 (70.09%), Postives = 92/107 (85.98%), Query Frame = 0
BLAST of CsGy4G009570 vs. TrEMBL
Match: tr|M5WW56|M5WW56_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G249500 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.8e-38 Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of CsGy4G009570 vs. TrEMBL
Match: tr|A0A059CM55|A0A059CM55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00827 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.3e-35 Identity = 69/107 (64.49%), Postives = 87/107 (81.31%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |