Csa4G051510 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACCCAGTTTCGCATTTCGGTTGGATTCTTTTTACTGCTGCTAATTTGTTACTGCGTTCGTGTTGATTCTAAGGTACGAGAGCTTCATTTCGCTTCTGTAGGATTGAATTTATCATTTCTGTTTAGCGTATCCTTCGCGATGGATTTGAATGTAGGTGGAAGATAGTGCCAACAATGGTCTAGATTCGAAAACAGTGAATAAAGGAAATGATGCAAACAAAGACCCCGGGCCTAATAAGGATCTTAATTCTGTTTCGGCTGGTAAGGAAAAGAAGTCTGAACAACAAGTAAGCGTCTCAAAGGAGGGTGTTAAGAACCGTGAGGATAAAATTAAGAAGGATCCTGAAAGTGAAACAGTATCGAAAGAAGGTGCCGATAAAGTAAAGAAGGACGATGGTTTAGGAGAGGAAGGGAGGAATAAGGGAGACAAAGTAAAGGGGAAGCCGGTGGATAATTCAGTTTCAAAGGATGGGTCTAAGAGTAGTGGGAAGGGAGAAAGTACAGTATCTTCAGCCTCGAAAAGAAATGATGGCTCTTCCGGTGAGGATTGTGATTCATCAAATAAATGCACTGATGAGGCAAAGAAGTTGGTTGCTTGCTTGCGAGTTCCAGGAAATGGTATGCATTTACAGCAATTGAGTTTAAATTTGTTACTAAACATGGTGGTTTAAGTTATTTTCTGTACCGATTCCAATTGTTTTTGCTCTATTTATTTCTGCAAATGGTAGTTCTTTATTCTGTACAAAATTTTGCTCTTAATATGTGATGATGATTTTAATAGGCTTCCATATTCTTCATTTAAAATGTGGGACGTGCTTGGGGGGGTGGGGGAGCTACTATATAGTATAACTTGAAATCAGATTGCATCATGAGTATTAAGTTTGCATGTGTATTGGTTTTACAACATAATAAAGATTTTGACTTAAGCACCCGGTAAAATTCGAAAGGTTCAAGGCAGAAATGAGTTAAGACTTTAACTCTGTAAAGGCTCATGCTGTATTGATCTTCGCTTTTAGAAATTTTAGATTTCCTTTTACAACTTAATCTTAATTTTGACTTAAGCACCTGGTAAAATTCTAAAGGTTCAGGGGTCGAGATGAGTTAGGACTTTAAACACTGCAAAGACACATGTTTGTATTGATCTTCTCTTTTAAAATTTTAGATTTTCTCTTACCACAGCATCTTAATTTTGATTTGAGCAAATTCTAAATGTTCAAGGCATAGGTGAGTTAGGGCTTTAACCACTATAAAGGCACATGCTGTATTGATCTTCATTTATTTATTATTTTTTTCCACATTAAGGTCCATGGAGTTTAAGTCAAAAGCACAGATGGTTGGGCTTGTTAAGGTGATGATTGACAGTTATAGATTTTCTTTTTCTATTTCAATGCTGTTTTCCTTTGTGGACATCGTTTTCGAATCTAACTTCTTTGAGTAATAACCAATTTTACTTAGCCAACCAAAATCTTTCAAATCTTAGATGTGCTTTCCTTCAACAAGTTGGCATCTGAGTGCCATTATGAATGTGGCAACCAATTGATAAGAGGTTATGAGTTCAATCCATGATGGACACCTACCTAGGAATTAACATTTTAAGAGTTTTCTTGACACCCAAGTTTTGTAGAATCAGACAAGTTATTCCGTGAAATTAGTTGAGGTGCGCATAAGCTAGCCTGAACACTCACGTATATTAAACAAAATGTGCAAACCATCTATTGCAATATCAAATCTGATCTCTGCAGGGCTAGGGCAGTTCTGTTTTGGACTTAAATGTATGCTAAGAATATTGGTTACGTTGTATTAAACAAATGGGATTGCTACAGATTGAAAGTTGCATATGGTTACAAATACACGAACCTAACATTTTTCAGCTGTTATTACCTTTTCTTAGTGTGCACTTCATCACAATAAAAGTTGTCTCATTATTAATCATTTCTATTTTTTCAGTTAATGCGTTGTATATATTTTCAAATCTTACATTCTTGTATGTATACAATGTTGCAGATTCTCCTCAACTTTTGTTGCTAATCCAGAACAAAGGAAAAGGTCCTCTTACTGCGAAAATTTCTGCCCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTCAACTTCAAGAGAGAGAAAATAAAAAGGTATTTAGACCATTTCATATGATGCTTAAGAAATCGTAGCCTTAAATAGTGAGATGTTTAAGTTAGATGTTTGATTATTTTGATGAAAAGATCAATGAATAACCAATCCCCAATCATCTGTTCCTTTAATGCTTGGTGCAGGGACTTTCGCTCCTTGTTACATTATATGCCAAATTTTCATGCACTGCACCCAATCGTTTTTTCCTTTAAGGCAAAGAACATGGATGATAAGACATCGTCCCTAAACTCCCAAGTGTCTCAAAAAAGATATCTAAGTAGTGAATGTGGAGGCAGGAGAGTAGTTTTGACTTTCCCTAGATAAAGATCCCCATCGAAGTGTATCAACGGATGCTCCATCTATTTGATTTTCAACTCTACATATAAGTCTATTCTCTATAAAACTCGTATCTTTGCTCTCTGACCATAGGAAAACAACACATCCCTCCACCCACCTTTCTGAAATGTTTCCAGTTCAGTAATTATTGGTTGTGAATTGGTTTTACCAGTATTATGCTTGTTTATATATGTAGTTATTGTGGATTCAATGGAACTGCAGACTTACTATGACTATGAGAGACCAGGGTTTTTACGAGAGAAATAATTTTATTGGGAAGAATAGTAAGGTTCTCACTCTTCTGAGGAGATTAGAGAAGCATTTCTTTATGAGCTGATTCAGAAATGGGAGGATAAAATGTGCTCTCCCTAGAGAGCCAACGGAGCAACAATGAAGCTTTCCTGGTGTGAAAACTCTTGAAATTTATAAATTAGGAACCTCTGTTGAGTCCATCACAATAAATTCCAAAACCCCGAAGTCAATTGATGTCATTTCAAAGGGAGGGATTTAGAATTGAATTGCTTTTTGATCGAGGACCAAGGGATAAGGAGGACTAGTTTCTTACTCCAAGTTCAAACACTCCACCAACAAAATGATTAGACTTACACGAATGGTTTTGGTATACAACCTTGTCTCAAGAATTGCGGAAAAATGGTGATGAGTCTCTATCATCTATAAGAGATTTTTCATTAAAAAGTTAAAAAACTAACATTCTGTATTCCCTTTTCGCCCTTAAAATCTATCCTACTTTAACCAAAGAGACTTTAAAGTCCATTCTACCCCTAACTCAAAAATACTAAATCCAAATAAAACATACATGGATGTAAAAATAATTTTTTTTTACCAAATATTAGGTTTGTTTGCAAATTAAATTACAATAATGAAATTTACAAAAATCGATCAATTTTATCTTGTGGAACATCACATGAAACATTTATAGAGCTTTTGGTTAGTTGTCTCTTGAACCATCTCAATTGAGTTCATCTTTATTTATATGGGAGAATTCAATGCTAACTTTAGCTTGTTAGCTCTTGAACACGTGATTGGATCTGGAAGTAACATAGAGACTTCTTGATTCATATCATTTACAATTGACTTCAATTAGAAAAAGACAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAGGAACATATACAAATAATTTTGGAAATAAAACTCCATTAAAGGTTCAAAAGTTTGGTCAGTTCAGTATAGTGAATCGTTCTTGTGTCTGAACTTCCATATACCATGCATTCTCTCCCATCATAGCACAGCAATCGTGGCTAGGGAACTTAACCTTAGAACATTGGCTAAACTTCAAGCCAAGCTTAAGAGTGGATTATGGTGTAAGAAATATTGTAATTTGAGGGAAGAAGACATCGCCCAAAGTTGAAAATTCTTTGTTCTGCACTTACGTTGAAATCAGAACTTTCTCAAGGCTCTTCCATTAATTCTGACACATTAAAGAAGATAAGAGTGATAACTTGGTTTGCCTCGAGCATCAGTTATCACCACTCTGTCGGCAGAACAGCCAGCAGTTTGTACACATTTTTGAGGTCATACTGGTCTTATGCTTCTCTGACAATCCTGCTTACAAGTTCTCATTGAAGGAACAGTCAACAAATTATAACCCACTAGGGGTGTAGACAGGTTCGGTTGGGGGTATTTTGGGACCAACCCGAATTTTTTGGTTGGCAATCTGAATGACCCGAGAAGCATTCCTAACCCAACCTAATCCTTAAAATATAGGTTGAGTTGGGTTATTGGGTAGTATGATTCTTTTCCCATTTCTAATTTTTGTTAAATTTAAAAAACATGATGACATCATATCCATAAATCCACACATCCAAAAAATCGATAAAGTACAACATTAATATAATAATACTTAACAAAAAGTTTTAAAACATCCGGTATTACTTAAGGAAACTCAAATATGAACCAATGTTCTAAAATAAAAAAACATTTCAAACATCATATTATAAAACTTAATATAATATAAATATATATAATATCATTAATTTGGGACGACCAAAATTTAAAAACCTCAACCCGAGTCCCAACCCATCCCGGAAAAAAAAAAGACCCAACCCAACATTTATCATATGAGTCGGGTAGTTTGAGTTATTTGAGTTTAAGGTTAGGTTTAGGGTTATTCTTACACCCCTATAGCCCATGGTTAAAATCCAATAAAAGATCTCATCTATTTCCTTGATAATCTTTGACTACTATCTCACCAAGTATCCCAGTGACAATTAGATTGTAGTAAACTAAGCCTTTTAATAATATGGAATATCTGCTGATTGTAAGACACATGTACTGAAGTTTCATCGTAATATACACATCCAAACAATCAAATTATGTAGGTAAAAGTTTCAATCGGCGATGGAGGAGATGGGAATACTATCGTTCTGACTTCAGGTGGCGGCCGTTGTAGTCTTGATTTTAGGGATCTTGTTGCGCACCATAATGCCAAAGATTCTGATAATGTCCCCAAGTCCTCGTGGTTCAGCTACCTCACAAAACCACACGTTATCGCAATTTTAGCTTTTGGTGTAATTCTGACCATTGCAGCTGTTTCAGTGATCATCAGCATTCGTCGTAAGAATTTCGTAAGTAGCAATTCTAAATATCAAAGGCTGGACATGGAGCTCCCTGTTTCCCTTGGAGGCAAAGCCGTTGCTGACAATAACGATGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTTCCTTGCCCGTTACTCCAAGTCTTTCTTCGAAAGGCCTCGCCTCACGACGGTTGAATAAGGATGGCTGGAAAGATTAG ATGAAGACCCAGTTTCGCATTTCGGTTGGATTCTTTTTACTGCTGCTAATTTGTTACTGCGTTCGTGTTGATTCTAAGGTGGAAGATAGTGCCAACAATGGTCTAGATTCGAAAACAGTGAATAAAGGAAATGATGCAAACAAAGACCCCGGGCCTAATAAGGATCTTAATTCTGTTTCGGCTGGTAAGGAAAAGAAGTCTGAACAACAAGTAAGCGTCTCAAAGGAGGGTGTTAAGAACCGTGAGGATAAAATTAAGAAGGATCCTGAAAGTGAAACAGTATCGAAAGAAGGTGCCGATAAAGTAAAGAAGGACGATGGTTTAGGAGAGGAAGGGAGGAATAAGGGAGACAAAGTAAAGGGGAAGCCGGTGGATAATTCAGTTTCAAAGGATGGGTCTAAGAGTAGTGGGAAGGGAGAAAGTACAGTATCTTCAGCCTCGAAAAGAAATGATGGCTCTTCCGGTGAGGATTGTGATTCATCAAATAAATGCACTGATGAGGCAAAGAAGTTGGTTGCTTGCTTGCGAGTTCCAGGAAATGATTCTCCTCAACTTTTGTTGCTAATCCAGAACAAAGGAAAAGGTCCTCTTACTGCGAAAATTTCTGCCCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTCAACTTCAAGAGAGAGAAAATAAAAAGGTAAAAGTTTCAATCGGCGATGGAGGAGATGGGAATACTATCGTTCTGACTTCAGGTGGCGGCCGTTGTAGTCTTGATTTTAGGGATCTTGTTGCGCACCATAATGCCAAAGATTCTGATAATGTCCCCAAGTCCTCGTGGTTCAGCTACCTCACAAAACCACACGTTATCGCAATTTTAGCTTTTGGTGTAATTCTGACCATTGCAGCTGTTTCAGTGATCATCAGCATTCGTCGTAAGAATTTCGTAAGTAGCAATTCTAAATATCAAAGGCTGGACATGGAGCTCCCTGTTTCCCTTGGAGGCAAAGCCGTTGCTGACAATAACGATGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTTCCTTGCCCGTTACTCCAAGTCTTTCTTCGAAAGGCCTCGCCTCACGACGGTTGAATAAGGATGGCTGGAAAGATTAG ATGAAGACCCAGTTTCGCATTTCGGTTGGATTCTTTTTACTGCTGCTAATTTGTTACTGCGTTCGTGTTGATTCTAAGGTGGAAGATAGTGCCAACAATGGTCTAGATTCGAAAACAGTGAATAAAGGAAATGATGCAAACAAAGACCCCGGGCCTAATAAGGATCTTAATTCTGTTTCGGCTGGTAAGGAAAAGAAGTCTGAACAACAAGTAAGCGTCTCAAAGGAGGGTGTTAAGAACCGTGAGGATAAAATTAAGAAGGATCCTGAAAGTGAAACAGTATCGAAAGAAGGTGCCGATAAAGTAAAGAAGGACGATGGTTTAGGAGAGGAAGGGAGGAATAAGGGAGACAAAGTAAAGGGGAAGCCGGTGGATAATTCAGTTTCAAAGGATGGGTCTAAGAGTAGTGGGAAGGGAGAAAGTACAGTATCTTCAGCCTCGAAAAGAAATGATGGCTCTTCCGGTGAGGATTGTGATTCATCAAATAAATGCACTGATGAGGCAAAGAAGTTGGTTGCTTGCTTGCGAGTTCCAGGAAATGATTCTCCTCAACTTTTGTTGCTAATCCAGAACAAAGGAAAAGGTCCTCTTACTGCGAAAATTTCTGCCCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTCAACTTCAAGAGAGAGAAAATAAAAAGGTAAAAGTTTCAATCGGCGATGGAGGAGATGGGAATACTATCGTTCTGACTTCAGGTGGCGGCCGTTGTAGTCTTGATTTTAGGGATCTTGTTGCGCACCATAATGCCAAAGATTCTGATAATGTCCCCAAGTCCTCGTGGTTCAGCTACCTCACAAAACCACACGTTATCGCAATTTTAGCTTTTGGTGTAATTCTGACCATTGCAGCTGTTTCAGTGATCATCAGCATTCGTCGTAAGAATTTCGTAAGTAGCAATTCTAAATATCAAAGGCTGGACATGGAGCTCCCTGTTTCCCTTGGAGGCAAAGCCGTTGCTGACAATAACGATGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTTCCTTGCCCGTTACTCCAAGTCTTTCTTCGAAAGGCCTCGCCTCACGACGGTTGAATAAGGATGGCTGGAAAGATTAG MKTQFRISVGFFLLLLICYCVRVDSKVEDSANNGLDSKTVNKGNDANKDPGPNKDLNSVSAGKEKKSEQQVSVSKEGVKNREDKIKKDPESETVSKEGADKVKKDDGLGEEGRNKGDKVKGKPVDNSVSKDGSKSSGKGESTVSSASKRNDGSSGEDCDSSNKCTDEAKKLVACLRVPGNDSPQLLLLIQNKGKGPLTAKISAPDFVHLEKSEVQLQERENKKVKVSIGDGGDGNTIVLTSGGGRCSLDFRDLVAHHNAKDSDNVPKSSWFSYLTKPHVIAILAFGVILTIAAVSVIISIRRKNFVSSNSKYQRLDMELPVSLGGKAVADNNDGWENSWDDNWDDETPHTPSLPVTPSLSSKGLASRRLNKDGWKD*
BLAST of Csa4G051510 vs. Swiss-Prot
Match: CWC22_DROME (Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster GN=ncm PE=1 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 4.4e-06 Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 1
BLAST of Csa4G051510 vs. TrEMBL
Match: A0A0A0KX06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051510 PE=4 SV=1) HSP 1 Score: 754.6 bits (1947), Expect = 5.8e-215 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1
BLAST of Csa4G051510 vs. TrEMBL
Match: D7TVF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01370 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.1e-91 Identity = 191/384 (49.74%), Postives = 247/384 (64.32%), Query Frame = 1
BLAST of Csa4G051510 vs. TrEMBL
Match: B9GL67_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10550g PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.2e-84 Identity = 184/379 (48.55%), Postives = 237/379 (62.53%), Query Frame = 1
BLAST of Csa4G051510 vs. TrEMBL
Match: A0A067GMF7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017393mg PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 7.6e-82 Identity = 176/379 (46.44%), Postives = 236/379 (62.27%), Query Frame = 1
BLAST of Csa4G051510 vs. TrEMBL
Match: B9RCR9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691850 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 6.4e-81 Identity = 180/385 (46.75%), Postives = 235/385 (61.04%), Query Frame = 1
BLAST of Csa4G051510 vs. TAIR10
Match: AT1G64385.1 (AT1G64385.1 unknown protein) HSP 1 Score: 218.0 bits (554), Expect = 9.9e-57 Identity = 135/329 (41.03%), Postives = 190/329 (57.75%), Query Frame = 1
BLAST of Csa4G051510 vs. TAIR10
Match: AT3G51580.2 (AT3G51580.2 unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12 Identity = 78/292 (26.71%), Postives = 126/292 (43.15%), Query Frame = 1
BLAST of Csa4G051510 vs. NCBI nr
Match: gi|449464064|ref|XP_004149749.1| (PREDICTED: uncharacterized protein LOC101203513 [Cucumis sativus]) HSP 1 Score: 754.6 bits (1947), Expect = 8.3e-215 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1
BLAST of Csa4G051510 vs. NCBI nr
Match: gi|659102070|ref|XP_008451937.1| (PREDICTED: cylicin-2 [Cucumis melo]) HSP 1 Score: 709.1 bits (1829), Expect = 4.0e-201 Identity = 349/376 (92.82%), Postives = 363/376 (96.54%), Query Frame = 1
BLAST of Csa4G051510 vs. NCBI nr
Match: gi|225426358|ref|XP_002270995.1| (PREDICTED: uncharacterized protein LOC100254757 isoform X2 [Vitis vinifera]) HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91 Identity = 191/384 (49.74%), Postives = 247/384 (64.32%), Query Frame = 1
BLAST of Csa4G051510 vs. NCBI nr
Match: gi|731378368|ref|XP_010659163.1| (PREDICTED: uncharacterized protein LOC100254757 isoform X1 [Vitis vinifera]) HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91 Identity = 191/384 (49.74%), Postives = 247/384 (64.32%), Query Frame = 1
BLAST of Csa4G051510 vs. NCBI nr
Match: gi|645267380|ref|XP_008239043.1| (PREDICTED: uncharacterized protein LOC103337652 [Prunus mume]) HSP 1 Score: 335.9 bits (860), Expect = 9.2e-89 Identity = 179/378 (47.35%), Postives = 233/378 (61.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |