CmaCh04G006960 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGTCTACTTTTCAAAATTGCAGTTGAACTTGAGCCCTACAATCGTGCTCCTTGCAACTTTCTTCCTTGCTTTCTTTAGAAGCATATGGCGATTGCTTATGGATAATCGAACGAAGCCATGGAATCATTTGGTTTCTTCATTAGGTGAGTTATGTCTTAGTATGCTCCGCTGATCTGAACTTCTTGGCCTGCTTCTTTTTGTTTTTTCTAGTGTTAAGTTACTAGTTACTCTAGCTGATCCATGGTGTTTGATTTTACTTTACCTTCTATTTCTAGGAACTAGTGTGTTTGATGCTAGTGCAAAGTGAAGAAATCATATTGTTATTTTTCCTTTGACGTTATGAAGACTATGTTTCGTCTTTCGCTTGGATTTTTGATGGTGCTGTTATTTTTTCACTGCACCTGTGTTGATTCGAAGGTAAGAGAGGTTCATTTCGCTTTGTTAGGATTGAATTTACCATTTCTGTTTAGCGTCTCGTTGGCGATGTACTTGAATGTAGGTGGAAGAAAATGCAAACACCGGTCTCGATTCGAAAACAGTAAATAAAGTAATTGATGCAAGCAAGGACACTGAATCTAATAAGGTTCTCGATTCTGGTTCTGCTGGTAAGGAGAAGAAAGATGAACATCAAGGAAGCGTTTCAAAGGAGGGTGTTAAAAGCAGTGGGGATAAGATTAAGAAGGATCATGAAAGTGAAACAGTATCGGAAGGAGGTGCAAATGAAGTAAAGAAGGACGGTGATTTACGTAAGGAAGTAAAGAATAAGGGAGAGAAAGAAAAGGGGAAGCCGGTGGATAATTCAGTTTCGAAGGAAAAGTTCAAGAGTAGTGGGAAGGACGGCAGTACAGAGTCTTCAGCATCGAAAGGAAAGGATATCTCTTCTGGTGAGGACTGTGATTCATCAAATAAGTGCACCGATGAGGGAAACAAATTGGTTGCTTGCTTACGAGTTCCAGGAAATGGTATGCATCTACAGTATTTGAGTAGGACTTCAATTTTCTTACTAATATGGTGCTCTCAGTTGTCACGAGTTTAATTTTCTTACTAATAGGGTGCCTTCAAGATCTATATATTGGAGAAATCTCATTATATCTAACTTCACCATACAGGGGCTTTATCTAAATCGTTACGAATTTTAAAATACAGGAACTAAATTGTTACATGTAAGTTAAGGACAGTATTGTGATAAACCAGATTTATTCAGATTGAAATTTACATAATACATGAACCTAAGATCTCAGATTATGAATCATTTCTATTTTTTAGTTAATATTTTGGTTTCAAATCTTACATTCTAGTATGTTTACAATTTTGCAGAATCGCCTGATCTTTCGCTGCTAATCCAAAACAAGGGAACAGGTCCTCTCACTGTGAAAATTACTGCGCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTAAACTTCAAGAGAAGGAAGATAAAAAGGTATTTAGAACACTACATTTGATGCATAATAAACCATAGCCTTAAATGATGATGAAATGTCGAAGTTAAATGATTGTTGTTTTGATGAAAAGATTAATGACTAACCAATCCCCAATTATCTCTTCCTATATGCTTAGTGCTGGGCCTTTCGCTCCCTCTTATATTGGATGACAAGTTCTCATGCACCCAATTATTTTGTCTTTTGGGCTAAATAGACGGATGATAAGACATCCTCCCTAACCTCCCAATAACATTACCTGAAAGATCTCTAGCTATTGAATATGGAGGCAGGAGAGTAGTTAACACCACATGCCCTAGATTGGCGCCATAAAAGGCAATAAAGGACGTTCCATCAATTTGCTTCTCTCTCTACAGATAATTCCATTATCTAGAAATTTCTATAGTTGATCTCTAACTATGGGCAAACGGCACGTCGTCCACCTTTCTGAACTGTATCCAATTGGTTGGGAAGTGTTTTTGTTATCTATCTAGTTATTGCAGATTCAATGAAAGTGCAGGCTTACTAGTTACTATGAGGGAGAAAGGTTTTTACTGAGGATAATTTTCTTTTCTTTTGGCAAGAATTGGAAGGTTCTCACCACCCTCCTCTGAGAATGTAACGGAAACATTTCATAGAGCTGGAAAAAAAAAAAAAATTATCCTCCCTAGAGAGCCAAAGGAGTAGCAGATAAACTTTCCAGTTGATTTCAATTAGAAAAAAATGGGTTACAAACTAACTTTTGATATAGAATTCCATTGGGAGGTCAAAAGTTCCTTTAGTTCAGTTTAGTGAAACTCGTTCTTGTAACTGAACTTCCGAAATGCCATGCTTCCTCTTCAATCAAGGAATTGAAATCGTGGGTAGGGCACTTTACGTTAGAACATGGCTGAACTTAGAGAAAAACCTAAGAGTGGATTATGACGCATGAAATATTGTAATTTGAGGGGAAGAAGACATCACCTGAAGATGAAAATTCTTTTGTACTGCACTGAACAAGCTCTTCTATTTACTCCGAACACATTAAAGAAGATAAGTGATAACATAGTTTACCTCTAGCATCAGCCTCTCAAAAAGTTTACCTCCAGAATCAGTTACCCAGTCGGTCAGAACAAACGGAACTTTGTACATGGTCACATAAACCTTTGAGTTCAGATTGATCTTATGCTTCTCTGACAATCCAGCTAACAGATTTTCATTGAAGAAACAGTCAACAAATTACCCCCATTTTAGAATCCTACAAAGGATTTACATCTCTTTCTTCGAGACAAGGTCACATAAACATTCTTGAGGACAGACTGGTCTGGCGCTTTTCTGACAATCCAGCCAACTCTCATTCAAGAATTCGGATCCAATAAAAGATTTCATTTATTATGTTTTCGTTACTATGCTTCGGAGTACCCAAATTATATTGTAGTAAAATATGCCTTGTAATAATATAGAATAGCTGCTAATTGTAAGAAGATGCATGTGCTAAAGTTTCATCGTAATAAATAATCAAATTATGCAGGTAAAAGTTTCAATTGGTGATGGAGGAGATGGCCACACAATCGTTCTTACCACAGGTAGCGGCCGTTGTAATCTTGATTTTAGGGATCTGATTTCGCACAATAATGCCAAAGTTTCCGATAATCTCCCGAAGTCCTCACGGTTCAGCTACCTCACAAAACCACCTGTCATTGCAATCTTAGCTTTTGCCGTAATTCTAACATTTGCAGCTACTGTAGTTTTCATCAGCATTCGTTCTAAGAGTTTCACAAGTGGCAATTCTAAATATCAAAGGCTGGATATGGAGCTCCCTGTTTCCATTACAGGCCAATCCGTTGCTGACAATAATGACGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTACCTTGCCTGTTACTCCAAATCTTTCGTCGAAGGGCCTTGCCTCACGACGGTTGAATAAGGAGGGCTGGAAAGATTAGTCACTATTAGCTTCACACATACATACGTGTAATGGAAACCGACCCGACAGCGAATCTGATAATCTGGGAATTTTGATCAGGATTTCATCATACAAGGTACACCCATCTACCCCCTTTTAGACCAACAAGCATGTGTTATTGTATTTGCATTCAACTTCTGTAATTATTACCTCCTCTCTATTGTTCTCTTACCTTTCTCTATTGGATTGGTTTGGAGGAATGTGGAGTATCAGAACCTCCAATATATTTACTTCTTTTTGTTATAATAAGTGGGATAGGAAATTCTAATGTCTAGACTGGTAATATTTATTATTCGTTTAGTGATGCTCAAGTTGACTATATATATTTATTATTTATTTGAATA CCGTCTACTTTTCAAAATTGCAGTTGAACTTGAGCCCTACAATCGTGCTCCTTGCAACTTTCTTCCTTGCTTTCTTTAGAAGCATATGGCGATTGCTTATGGATAATCGAACGAAGCCATGGAATCATTTGGTTTCTTCATTAGGAACTAGTGTGTTTGATGCTAGTGCAAAGTGAAGAAATCATATTGTTATTTTTCCTTTGACGTTATGAAGACTATGTTTCGTCTTTCGCTTGGATTTTTGATGGTGCTGTTATTTTTTCACTGCACCTGTGTTGATTCGAAGGTGGAAGAAAATGCAAACACCGGTCTCGATTCGAAAACAGTAAATAAAGTAATTGATGCAAGCAAGGACACTGAATCTAATAAGGTTCTCGATTCTGGTTCTGCTGGTAAGGAGAAGAAAGATGAACATCAAGGAAGCGTTTCAAAGGAGGGTGTTAAAAGCAGTGGGGATAAGATTAAGAAGGATCATGAAAGTGAAACAGTATCGGAAGGAGGTGCAAATGAAGTAAAGAAGGACGGTGATTTACGTAAGGAAGTAAAGAATAAGGGAGAGAAAGAAAAGGGGAAGCCGGTGGATAATTCAGTTTCGAAGGAAAAGTTCAAGAGTAGTGGGAAGGACGGCAGTACAGAGTCTTCAGCATCGAAAGGAAAGGATATCTCTTCTGGTGAGGACTGTGATTCATCAAATAAGTGCACCGATGAGGGAAACAAATTGGTTGCTTGCTTACGAGTTCCAGGAAATGAATCGCCTGATCTTTCGCTGCTAATCCAAAACAAGGGAACAGGTCCTCTCACTGTGAAAATTACTGCGCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTAAACTTCAAGAGAAGGAAGATAAAAAGGTAAAAGTTTCAATTGGTGATGGAGGAGATGGCCACACAATCGTTCTTACCACAGGTAGCGGCCGTTGTAATCTTGATTTTAGGGATCTGATTTCGCACAATAATGCCAAAGTTTCCGATAATCTCCCGAAGTCCTCACGGTTCAGCTACCTCACAAAACCACCTGTCATTGCAATCTTAGCTTTTGCCGTAATTCTAACATTTGCAGCTACTGTAGTTTTCATCAGCATTCGTTCTAAGAGTTTCACAAGTGGCAATTCTAAATATCAAAGGCTGGATATGGAGCTCCCTGTTTCCATTACAGGCCAATCCGTTGCTGACAATAATGACGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTACCTTGCCTGTTACTCCAAATCTTTCGTCGAAGGGCCTTGCCTCACGACGGTTGAATAAGGAGGGCTGGAAAGATTAGTCACTATTAGCTTCACACATACATACGTGTAATGGAAACCGACCCGACAGCGAATCTGATAATCTGGGAATTTTGATCAGGATTTCATCATACAAGGTACACCCATCTACCCCCTTTTAGACCAACAAGCATGTGTTATTGTATTTGCATTCAACTTCTGTAATTATTACCTCCTCTCTATTGTTCTCTTACCTTTCTCTATTGGATTGGTTTGGAGGAATGTGGAGTATCAGAACCTCCAATATATTTACTTCTTTTTGTTATAATAAGTGGGATAGGAAATTCTAATGTCTAGACTGGTAATATTTATTATTCGTTTAGTGATGCTCAAGTTGACTATATATATTTATTATTTATTTGAATA ATGAAGACTATGTTTCGTCTTTCGCTTGGATTTTTGATGGTGCTGTTATTTTTTCACTGCACCTGTGTTGATTCGAAGGTGGAAGAAAATGCAAACACCGGTCTCGATTCGAAAACAGTAAATAAAGTAATTGATGCAAGCAAGGACACTGAATCTAATAAGGTTCTCGATTCTGGTTCTGCTGGTAAGGAGAAGAAAGATGAACATCAAGGAAGCGTTTCAAAGGAGGGTGTTAAAAGCAGTGGGGATAAGATTAAGAAGGATCATGAAAGTGAAACAGTATCGGAAGGAGGTGCAAATGAAGTAAAGAAGGACGGTGATTTACGTAAGGAAGTAAAGAATAAGGGAGAGAAAGAAAAGGGGAAGCCGGTGGATAATTCAGTTTCGAAGGAAAAGTTCAAGAGTAGTGGGAAGGACGGCAGTACAGAGTCTTCAGCATCGAAAGGAAAGGATATCTCTTCTGGTGAGGACTGTGATTCATCAAATAAGTGCACCGATGAGGGAAACAAATTGGTTGCTTGCTTACGAGTTCCAGGAAATGAATCGCCTGATCTTTCGCTGCTAATCCAAAACAAGGGAACAGGTCCTCTCACTGTGAAAATTACTGCGCCAGATTTTGTTCATCTGGAGAAGAGTGAAGTTAAACTTCAAGAGAAGGAAGATAAAAAGGTAAAAGTTTCAATTGGTGATGGAGGAGATGGCCACACAATCGTTCTTACCACAGGTAGCGGCCGTTGTAATCTTGATTTTAGGGATCTGATTTCGCACAATAATGCCAAAGTTTCCGATAATCTCCCGAAGTCCTCACGGTTCAGCTACCTCACAAAACCACCTGTCATTGCAATCTTAGCTTTTGCCGTAATTCTAACATTTGCAGCTACTGTAGTTTTCATCAGCATTCGTTCTAAGAGTTTCACAAGTGGCAATTCTAAATATCAAAGGCTGGATATGGAGCTCCCTGTTTCCATTACAGGCCAATCCGTTGCTGACAATAATGACGGATGGGAAAACAGTTGGGATGACAATTGGGATGATGAGACACCACACACACCTACCTTGCCTGTTACTCCAAATCTTTCGTCGAAGGGCCTTGCCTCACGACGGTTGAATAAGGAGGGCTGGAAAGATTAG MKTMFRLSLGFLMVLLFFHCTCVDSKVEENANTGLDSKTVNKVIDASKDTESNKVLDSGSAGKEKKDEHQGSVSKEGVKSSGDKIKKDHESETVSEGGANEVKKDGDLRKEVKNKGEKEKGKPVDNSVSKEKFKSSGKDGSTESSASKGKDISSGEDCDSSNKCTDEGNKLVACLRVPGNESPDLSLLIQNKGTGPLTVKITAPDFVHLEKSEVKLQEKEDKKVKVSIGDGGDGHTIVLTTGSGRCNLDFRDLISHNNAKVSDNLPKSSRFSYLTKPPVIAILAFAVILTFAATVVFISIRSKSFTSGNSKYQRLDMELPVSITGQSVADNNDGWENSWDDNWDDETPHTPTLPVTPNLSSKGLASRRLNKEGWKD
BLAST of CmaCh04G006960 vs. TrEMBL
Match: A0A0A0KX06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051510 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 3.0e-147 Identity = 287/376 (76.33%), Postives = 323/376 (85.90%), Query Frame = 1
BLAST of CmaCh04G006960 vs. TrEMBL
Match: D7TVF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01370 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.9e-80 Identity = 194/383 (50.65%), Postives = 259/383 (67.62%), Query Frame = 1
BLAST of CmaCh04G006960 vs. TrEMBL
Match: A0A067GMF7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017393mg PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.6e-71 Identity = 172/380 (45.26%), Postives = 240/380 (63.16%), Query Frame = 1
BLAST of CmaCh04G006960 vs. TrEMBL
Match: V4VIV2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020669mg PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69 Identity = 168/380 (44.21%), Postives = 238/380 (62.63%), Query Frame = 1
BLAST of CmaCh04G006960 vs. TrEMBL
Match: B9GXH7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13920g PE=4 SV=2) HSP 1 Score: 269.6 bits (688), Expect = 5.6e-69 Identity = 179/380 (47.11%), Postives = 238/380 (62.63%), Query Frame = 1
BLAST of CmaCh04G006960 vs. TAIR10
Match: AT1G64385.1 (AT1G64385.1 unknown protein) HSP 1 Score: 187.2 bits (474), Expect = 1.9e-47 Identity = 140/351 (39.89%), Postives = 196/351 (55.84%), Query Frame = 1
BLAST of CmaCh04G006960 vs. NCBI nr
Match: gi|659102070|ref|XP_008451937.1| (PREDICTED: cylicin-2 [Cucumis melo]) HSP 1 Score: 545.0 bits (1403), Expect = 1.0e-151 Identity = 294/376 (78.19%), Postives = 327/376 (86.97%), Query Frame = 1
BLAST of CmaCh04G006960 vs. NCBI nr
Match: gi|449464064|ref|XP_004149749.1| (PREDICTED: uncharacterized protein LOC101203513 [Cucumis sativus]) HSP 1 Score: 529.6 bits (1363), Expect = 4.3e-147 Identity = 287/376 (76.33%), Postives = 323/376 (85.90%), Query Frame = 1
BLAST of CmaCh04G006960 vs. NCBI nr
Match: gi|225426358|ref|XP_002270995.1| (PREDICTED: uncharacterized protein LOC100254757 isoform X2 [Vitis vinifera]) HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80 Identity = 194/383 (50.65%), Postives = 259/383 (67.62%), Query Frame = 1
BLAST of CmaCh04G006960 vs. NCBI nr
Match: gi|731378368|ref|XP_010659163.1| (PREDICTED: uncharacterized protein LOC100254757 isoform X1 [Vitis vinifera]) HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80 Identity = 194/383 (50.65%), Postives = 259/383 (67.62%), Query Frame = 1
BLAST of CmaCh04G006960 vs. NCBI nr
Match: gi|731378378|ref|XP_010659174.1| (PREDICTED: uncharacterized protein LOC100254757 isoform X3 [Vitis vinifera]) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 183/357 (51.26%), Postives = 244/357 (68.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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