Csa4G017180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G017180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRas-related protein Rab-25; contains IPR001806 (Small GTPase superfamily), IPR002041 (Ran GTPase), IPR005225 (Small GTP-binding protein domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr4 : 2336963 .. 2339981 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAATGTAAGAATATATATTATATAGAGAAAAAGGGAATTGGGAAAGAGAGGATGATGAAAGGAGAGCAGTAGCACTACATGCGCAGCTTGTCTCTCTGCCAGCTTTGCTTCTTCTATCTTCATCCATTCCTCCATTTCTCCATTATTGCTTCTTCTTCTTCTTCTTCTTCACTTTCTCTCTCTAACCAGCTTTCGTCCACATTCTTGCTTTTATTCATTTGAATTTTTCGCAAATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGAGTGAGTTCCTGTCTTTTTCTATTCTCTCTCACTCAATCAACTCTCTCTCTTCTTTTGATCTTGTTCTTGTTGTGGTCTTTTGGTTGAGATGTCTAGATCTGGATTGATAAGCTTTTAAGATTTTGTTTAGTTACTTTAACTAACTCAATCCTGATGATTGAGATGGCTTACTCTTGATTCTTGAACTTTAAGTTTTCTTTCATCTTTCAAATAATTCAGATCTGGTTCGGTTTTGTCTTTGTTCTGTACAATTTCGGGTGATGAGAAATTCTGTTTCTTGGATTTTGCTTGTCTTATTAGCATCTAATTCGGTGCTTCTGTCCTCCGTTCTGAACAAGAAAATTTCATTCTCAGACTTCAAGCTTCAAATGTTAGGTGTTGGCCAACCTAAATGCACTTGTTCTTGAAAACTTCTAGTTACTTTTTAGAATGGCTTAATTAAGTTCAATTTGTAGAACTTAATTACCGGCTCATGTTTTGGCCTTACATTTGGATCAACAAATCTCTCCTGTGTCACTTGTTCTTACAAAATTTCTGGTTTAGGCACTGCTTTGAGTTGAGTAATTGCTCATAATTTAGATGTGGTCAATTCCTACATGACTGATTATTCCAAAAAAAATGAAAAGAAAGAAAGAAAAGATAATTTCTGGTTTGGAGTATCCATTTAGATCGAAAGTTCGGTCGCCTTTCATGGGAGTGAGATTACCTTGATGATGCTAACCTCATAGCCTTACCTTGCACTTGAAAAGTTGTTGGGGTAAATCCTATTTGAATCCCTTAACTTTGGTCTTTATACTTTTGAATTATTTGGATTTGCTCACTAAGGTTTTGCATTTCTGTTCGTTTGGGTCTTGCTGTGAATCTTTATATTGTATTTAGCGTAATTCTTGGTTCATTGTTTGGGTGAATAGTAATTGATGTAAACCTTGTGTAGATATGAATTTGATGCAAATTTACATCCGAGCTAGCATCAAGAAACTCTCCCTGTCATTTGTTCTATTGCTTAGGTTTTGTCACTGTCTTGGAATTCCGGATAGCGGATACCATACTTAATAACACTTGTTCCAATTTTAGGGAGAACTTAGTAGTTTTGATAACTTTTTTTTCTTAAATAAATAAATAAATAATTTGTGTTCTGTATTTCTTGTAGTATGATGCTAAGAATGGAAATTACTGTCTCCCATTGTGAATTGCATGAAAGTAACATATTGTGAAAAGAGATATGGGCTCTTTTTTTTTTAGTTTACTTGTACATTCTTCTAATTATAGTAGTTTGGGTAACTGTTCTTATTTTAAAAGGTGTGTTCTGTATTTCTTTTAGTACGTTCACACAAATAATCTATTTTCCAAAGAAACAACAGAGCTATTTCTTCTAAGATGATGGATCTGTGACTAGTGATCTTACTATATACAATGGCAGTTACTTTCTTTTTCTGATCTTTCAATCATTATTTTCAACAACAGTGATCTTGCTTAGTTGAGTTGGTTTCAAAAATAGTTTCGGGTTGGAGCTGGGAAAATTGTCTGTAAAAATCGAGCGGCCTTCCTGTAATTCTTACTTAATCAATTGGAGCAAATCATCAACCTTTGCAATGGAAATTGGTGTTTTGTGATTAATGAGTCCAAATTAATCGGTTTGATAAGTAGTCATCATTAGCTACTACATGCTTGATTGCTTGATATCTCTGTTCCACTGTTAATGTCTTGTATTATTGTGCTCTTTTCCACTTCTAATGTTGAATTTATTCTATAAAGTTGATTAAGTGATCAATTTTTCATTCAAATCGTTTGCAGCTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTTGTGAACAACGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGATTGATTATCTTTTCATCTCTTAGCTCCACAAAATTAGTGTTGTTATTTTCACCATGTTGGCTTCCTAAAGTCTCCTGTTTTTGGTTGGTGTGGTGAATCAATCAAATTTATGTGTTTGTTTGTTTCATAAATTTCACTCAAAAGCGCTCCACATATGCATGCAATATGTAAGACCATTTCCAAATATAGAAAAGAAATCATTTCTTTCAATTTAATTAAGAAGAGACAGTGAAAAAGAAAACACTTTTTGTATTAATTATTTATTTGAAGCAAATTGTAAGAGCAAGCAAATTTGAACATTATTTTATTTAATTTTTGAATATCTTTTTAGTTTG

mRNA sequence

ATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGACTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTTGTGAACAACGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGA

Coding sequence (CDS)

ATGTCATCCTCCGACGACGAAGGCGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGATTCTGCCGTCGGTAAGTCCAATTTGCTCTCTCGTTATGCTAGAAACGAGTTTAATCTCCACTCCAAAGCCACCATCGGCGTCGAATTTCAAACTCAGGTTATGGATATTGACGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCGTGCTGTTACCTCTGCCTATTACCGCGGTGCTGTTGGTGCTCTTATCGTTTATGATATCAGCCGTCGCTCCACTTTTGATAGTGTCGGCCGATGGCTCGACGAGCTCAAGACTCATTCCGATACAACTGTAGCAATGATGCTAGTCGGGAACAAATGCGATTTGGAGAACATTAGGGATGTAAGTGTCGAGGATGGCACGAGTCTTGCAGAAGCCGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGACTCAACAAATGTGAAAAGGGCATTTGAAATTGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAATTCAGATACATACAAAGCAGAATTATCGGTGAACCGGGTGAGCCTTGTGAACAACGGTGGATCGAAGCAATCAGAAGGATACTTGTCTTGCTGTTCCAGGTGA

Protein sequence

MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR*
Homology
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BLAST of Csa4G017180 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.1e-97
Identity = 182/216 (84.26%), Postives = 195/216 (90.28%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR VSVE+G +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVNNGGSKQSEGY-LSCCS 217
           LNSDTYK ELS+ NRVSLV +     ++G+  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

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BLAST of Csa4G017180 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95
Identity = 181/216 (83.80%), Postives = 196/216 (90.74%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR VSVE+G +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDTYKAELSVNRVSLV--NNGGSKQSEGYLSCCS 217
           LNSDTYK EL+VNRVSLV  +N  SKQS G+ SCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 216

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BLAST of Csa4G017180 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.1e-93
Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR VSVE+G SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           LNSD+YK EL+VNRVSLV N    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

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BLAST of Csa4G017180 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-89
Identity = 169/214 (78.97%), Postives = 189/214 (88.32%), Query Frame = 1 

Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR VSVE+G +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVNN-GGSKQSEGYLSCCSR 218
           SD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]
BLAST of Csa4G017180 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72
Identity = 143/218 (65.60%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+VS  +G +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELS-VNRVSLVNNGGSKQSEGYLSCCS 217
           +S        A LS   +V + ++G  +  +G   CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG--GCCS 220

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BLAST of Csa4G017180 vs. TrEMBL
Match: A0A0A0KU21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017180 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]
BLAST of Csa4G017180 vs. TrEMBL
Match: A0A067L385_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23819 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 3.9e-107
Identity = 204/218 (93.58%), Postives = 211/218 (96.79%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVSVE+G SLAE EGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNG--GSKQSEGYL-SCCSR 218
           LNSDTYKAELS+NRV+LVNNG  GSKQS+GYL SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGTDGSKQSQGYLSSCCSR 219

[Close]
BLAST of Csa4G017180 vs. TrEMBL
Match: B9IAD0_POPTR (Ras-related protein ARA-4 OS=Populus trichocarpa GN=POPTR_0014s14790g PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 5.7e-106
Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSD+EGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVAMM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVSVE+   LAEAEGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNGG-SKQSEGYLSCCSR 218
           LNSDTYKAELS+NRV+LVNNG  SKQ++ Y SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGNDSKQAQSYFSCCSR 217

[Close]
BLAST of Csa4G017180 vs. TrEMBL
Match: B9SN17_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1518710 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-105
Identity = 201/217 (92.63%), Postives = 209/217 (96.31%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDV+VE+G SLAEAEGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNG-GSKQSEGYL-SCCSR 218
           LNSDTYKAELS+NRV+LVNN  GSKQS+ Y  SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNSDGSKQSQSYFSSCCSR 218

[Close]
BLAST of Csa4G017180 vs. TrEMBL
Match: M5XI29_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011186mg PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 8.2e-105
Identity = 199/219 (90.87%), Postives = 210/219 (95.89%), Query Frame = 1 

Query: 1   MSSSDDEG-GEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDG 60
           MSSSD+EG GEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+IDG
Sbjct: 1   MSSSDEEGSGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIDG 60

Query: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTV 120
           KEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+R++TF+SVGRWLDELKTHSDTTV
Sbjct: 61  KEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRKTTFESVGRWLDELKTHSDTTV 120

Query: 121 AMMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVS 180
           AMMLVGNKCDLENIRDVSVEDG  LAEAEGLFFMETSALDSTNV +AFE+VI+EIYNNVS
Sbjct: 121 AMMLVGNKCDLENIRDVSVEDGKGLAEAEGLFFMETSALDSTNVIKAFELVIQEIYNNVS 180

Query: 181 RKVLNSDTYKAELSVNRVSLVNNG--GSKQSEGYLSCCS 217
           RKVLNSDTYKAELSVNRVSLVNNG  GSK+S+GY SCCS
Sbjct: 181 RKVLNSDTYKAELSVNRVSLVNNGADGSKKSQGYFSCCS 219

[Close]
BLAST of Csa4G017180 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 355.9 bits (912), Expect = 1.8e-98
Identity = 182/216 (84.26%), Postives = 195/216 (90.28%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR VSVE+G +LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVNNGGSKQSEGY-LSCCS 217
           LNSDTYK ELS+ NRVSLV +     ++G+  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]
BLAST of Csa4G017180 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 350.9 bits (899), Expect = 5.6e-97
Identity = 181/216 (83.80%), Postives = 196/216 (90.74%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVA M
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR VSVE+G +LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDTYKAELSVNRVSLV--NNGGSKQSEGYLSCCS 217
           LNSDTYK EL+VNRVSLV  +N  SKQS G+ SCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 259

[Close]
BLAST of Csa4G017180 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 343.2 bits (879), Expect = 1.2e-94
Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR VSVE+G SLAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           LNSD+YK EL+VNRVSLV N    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]
BLAST of Csa4G017180 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 330.1 bits (845), Expect = 1.0e-90
Identity = 169/214 (78.97%), Postives = 189/214 (88.32%), Query Frame = 1 

Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR VSVE+G +LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVNN-GGSKQSEGYLSCCSR 218
           SD YKAELSVNRVSLVNN  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]
BLAST of Csa4G017180 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 274.2 bits (700), Expect = 6.7e-74
Identity = 143/218 (65.60%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+VS  +G +LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELS-VNRVSLVNNGGSKQSEGYLSCCS 217
           +S        A LS   +V + ++G  +  +G   CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG--GCCS 220

[Close]
BLAST of Csa4G017180 vs. NCBI nr
Match: gi|449468736|ref|XP_004152077.1| (PREDICTED: ras-related protein RABA5d [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 3.0e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]
BLAST of Csa4G017180 vs. NCBI nr
Match: gi|659107919|ref|XP_008453919.1| (PREDICTED: ras-related protein RABA5d [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 1.9e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180
           MMLVGNKCDLENIRDV+VE+GTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 218
           KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]
BLAST of Csa4G017180 vs. NCBI nr
Match: gi|743898998|ref|XP_011042789.1| (PREDICTED: ras-related protein RABA5d-like [Populus euphratica])

HSP 1 Score: 398.3 bits (1022), Expect = 8.7e-108
Identity = 202/216 (93.52%), Postives = 211/216 (97.69%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSD+EGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVAMM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVSVE+G SLAEAEGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNGG-SKQSEGYLSCCSR 218
           LNSDTYKAELS+NRV+LVNNG  SKQ++GY SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGSDSKQAQGYFSCCSR 217

[Close]
BLAST of Csa4G017180 vs. NCBI nr
Match: gi|802560037|ref|XP_012066252.1| (PREDICTED: ras-related protein RABA5e [Jatropha curcas])

HSP 1 Score: 395.6 bits (1015), Expect = 5.7e-107
Identity = 204/218 (93.58%), Postives = 211/218 (96.79%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVSVE+G SLAE EGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNG--GSKQSEGYL-SCCSR 218
           LNSDTYKAELS+NRV+LVNNG  GSKQS+GYL SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGTDGSKQSQGYLSSCCSR 219

[Close]
BLAST of Csa4G017180 vs. NCBI nr
Match: gi|224131546|ref|XP_002321111.1| (Ras-related protein ARA-4 [Populus trichocarpa])

HSP 1 Score: 391.7 bits (1005), Expect = 8.2e-106
Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 1 

Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSD+EGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVAMM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121

Query: 123 LVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVSVE+   LAEAEGLFFMETSALDSTNVK+AFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVNNGG-SKQSEGYLSCCSR 218
           LNSDTYKAELS+NRV+LVNNG  SKQ++ Y SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGNDSKQAQSYFSCCSR 217

The following BLAST results are available for this feature:
BLAST of Csa4G017180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAA5D_ARATH3.1e-9784.26Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1[more]
RAA5E_ARATH1.0e-9583.80Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1[more]
RAA5C_ARATH2.1e-9381.86Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1[more]
RAA5B_ARATH1.8e-8978.97Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1[more]
RAA5A_ARATH1.2e-7265.60Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1[more]
BLAST of Csa4G017180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU21_CUCSA2.1e-116100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017180 PE=4 SV=1[more]
A0A067L385_JATCU3.9e-10793.58Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23819 PE=4 SV=1[more]
B9IAD0_POPTR5.7e-10692.13Ras-related protein ARA-4 OS=Populus trichocarpa GN=POPTR_0014s14790g PE=4 SV=1[more]
B9SN17_RICCO1.3e-10592.63Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1518710 PE=4 SV=1[more]
M5XI29_PRUPE8.2e-10590.87Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011186mg PE=4 SV=1[more]
BLAST of Csa4G017180 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31680.11.8e-9884.26 RAB GTPase homolog A5D[more]
AT1G05810.15.6e-9783.80 RAB GTPase homolog A5E[more]
AT2G43130.11.2e-9481.86 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT3G07410.11.0e-9078.97 RAB GTPase homolog A5B[more]
AT5G47520.16.7e-7465.60 RAB GTPase homolog A5A[more]
BLAST of Csa4G017180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468736|ref|XP_004152077.1|3.0e-116100.00PREDICTED: ras-related protein RABA5d [Cucumis sativus][more]
gi|659107919|ref|XP_008453919.1|1.9e-11599.08PREDICTED: ras-related protein RABA5d [Cucumis melo][more]
gi|743898998|ref|XP_011042789.1|8.7e-10893.52PREDICTED: ras-related protein RABA5d-like [Populus euphratica][more]
gi|802560037|ref|XP_012066252.1|5.7e-10793.58PREDICTED: ras-related protein RABA5e [Jatropha curcas][more]
gi|224131546|ref|XP_002321111.1|8.2e-10692.13Ras-related protein ARA-4 [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0046983 protein dimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU105498cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G017180.1Csa4G017180.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU105498CU105498transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 15..175
score: 6.4
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 12..170
score: 7.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 6..207
score: 2.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..186
score: 4.06
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 14..35
score: 9.6E-41coord: 55..77
score: 9.6E-41coord: 152..174
score: 9.6E-41coord: 37..53
score: 9.6E-41coord: 117..130
score: 9.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..217
score: 5.5E
NoneNo IPR availablePANTHERPTHR24073:SF583SUBFAMILY NOT NAMEDcoord: 6..217
score: 5.5E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 11..177
score: 2.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 16..177
score: 8.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 14..177
score: 2.1E
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 19..212
score: 1.
NoneNo IPR availablePROFILEPS51419RABcoord: 9..215
score: 33