Cp4.1LG03g12300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g12300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-related protein Rab-25
Location	Cp4.1LG03 : 10289697 .. 10292299 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATACATACATACATATATACATATATATATAATCTGAAAGAGATGGTGGAGGGAAGGCACTACCACTAGCGCTACATGCGCAGTTTGTCTCTCTGCCAGCTCTGCTTCTTCAACCTCCGCCATTCCATTCCATTATTGCTCTTCTTTTTCTCTCTCTAAAAGCTTGCTGTCACATCTTCCCAACTCCATCCTCTTCCTTCCTTCCTTCCTTCCTTCCACAATCTCGATAATCGAACCCCCGAATCCCTAGAAGGAATCAGAAGAAACAGAGAGGGACAAACGCGCACAATCGAAGCCTACGCAATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGAGTGAGTGCCTTACTCAGACTTACCTTTTTCTTTTGATGTTGTTCTTGCTCTGCCATTTTAGTTGAGATGTATAGATCTGAACTCTTCTCTTTTTCGAATTTTGTTGGGAGTGATTTCATTTCCTGTTCGCTGCTGTATTTTATTCCATACTGACCTAGGCTCGTTACATCCTCTAAAAGATTTCGTTCAATTACTTGGACTAACAACATCATATGAAAGAGATTGCAGGTCTTGATTCTTGAACTTTGCAATAATCCAGATCTAGTCCTGTATCGTATTTTCTCTGAAAAATTACTACCGACTTTGTAATGAATTTCTGTTTGTCGGATTTAGCTTCTTCATTTCCCCTGAAAATTACACTTATTAGCATCCAATTCGATATTGCTTTCAAAACTGTAATCGGAAATATCTATATTTCGTTCTCAGATTTCAAATTACTCTCACATTTTCAAGCTTTGATTCTCTCGAGTTTCAAATGTTGGTGTCGGCAACTCACAATTCAATGCCAATAAAACTACTTCTTAGCATAGCTGATTAAAATCAATATGTAGAACTTACCAACTCATATTTCACCTATTTGGCTTTTCAGATTGATCAATGAATCTGTACTGTCACTTGAGATCTTATAAAACTTCTGGTTTAGACGTCCTTTGAGTAATTGCTCATAATTTAGATGTATTCATTCCTATATGACTGATTATATTAAAATTTTCAGTTGCTTTGAGTATGCCATTTTGATCGAAAGTTCAGTTCCTTTCATGGAAATGAAATTACTCAATGCTGCTAATGATGCTAATGATGCTAATGATGCTATCCCCTCATAGCCTCACCTTGTAGTTGAGAACATGCTGGTTTAAATCCTATTTTGAACCCTAAACTCTTGACACTTGCTCTCTTGGGTCCTTGTACTTTTGAAATATTTGGTTTCCTCCCTAAACTCTTGACACTTTCTATTGTATTTAACATAAATCTTGGTTTATGGTATGGGTGGATAGTTGTTGATGCAGACCTTGGGTAGATATGAATTTGATGCAAATTTTCATCCGAGAATCAAATTTGCTGTTTCCCATTGTGGTGAAGCGAGTTTGTAGTATCATGAAAATAACATCTCGTGATAAGAGAGATGGGTCGAACCATCAACTTTTAGGATGGTAATTGGTATCTTAATTCCGGTAGATGACCCGACTGTGATATAGTGGGCACAAAGTTATCTGTCTGTTCCACTGTATATTTCTTAGAGTTGTTGTTCTTTCCCATTTTTAATGATGAATTTATGCTATCAAGTTGCTTAAATGATCAGAGTTTTGATTCGAATCATTATGCAGCTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGATCTTCATCTCTTCATGTTGGGTTCTGCTTAGTTTCTTCTGTCTTGTTTTGCTGGTGTGGTGCATTCAAATTGGTTGTTTTTCTATGTTTGTTTCCATTATTATAGCTTCCTCTAAAAGCTCCTCCTAGATCGACCATTTCCATATATAGAAATGAAATTATTTATTTGAATTTAATTAAAGACAAGAAGAAACATTTTTGTATTAATTATATTATTATTTGAAGCAAATATGAACAGATTTATTAAGTTTGTAAAGTGAATCATGATCAATAGGATCTTCCATGTTCACATGTTCTAATTATTGCTTCTTCTTTTTTTT

mRNA sequence

ACATACATACATACATATATACATATATATATAATCTGAAAGAGATGGTGGAGGGAAGGCACTACCACTAGCGCTACATGCGCAGTTTGTCTCTCTGCCAGCTCTGCTTCTTCAACCTCCGCCATTCCATTCCATTATTGCTCTTCTTTTTCTCTCTCTAAAAGCTTGCTGTCACATCTTCCCAACTCCATCCTCTTCCTTCCTTCCTTCCTTCCTTCCACAATCTCGATAATCGAACCCCCGAATCCCTAGAAGGAATCAGAAGAAACAGAGAGGGACAAACGCGCACAATCGAAGCCTACGCAATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGACTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGATCTTCATCTCTTCATGTTGGGTTCTGCTTAGTTTCTTCTGTCTTGTTTTGCTGGTGTGGTGCATTCAAATTGGTTGTTTTTCTATGTTTGTTTCCATTATTATAGCTTCCTCTAAAAGCTCCTCCTAGATCGACCATTTCCATATATAGAAATGAAATTATTTATTTGAATTTAATTAAAGACAAGAAGAAACATTTTTGTATTAATTATATTATTATTTGAAGCAAATATGAACAGATTTATTAAGTTTGTAAAGTGAATCATGATCAATAGGATCTTCCATGTTCACATGTTCTAATTATTGCTTCTTCTTTTTTTT

Coding sequence (CDS)

ATGTCGTCGTCGGACGATGAAGGAGGTGAGGAGTATCTCTTCAAGATCGTCATCATCGGAGACTCGGCGGTTGGTAAATCCAATTTGTTGTCTCGTTATGCTAGAAACGAGTTCAATCTCCATTCCAAGGCCACCATCGGCGTTGAATTCCAGACTCAGGTTATGGATATTGATGGCAAAGAGGTTAAGGCTCAGATTTGGGATACTGCCGGCCAGGAACGGTTTCGCGCCGTCACCTCTGCCTATTACCGCGGCGCCGTCGGTGCTCTCATCGTTTACGATATTAGCCGCCGTTCCACTTTCGATAGTGTCGGCCGATGGCTCGATGAGCTCAAGACTCATTCCGATACCACAGTGGCCAGGATGCTAGTTGGAAACAAATGCGACTTGGAGAACATTAGGGACGTGACTGTCGAGGAAGGCACGAGTCTTGCAGAAGCCGAAGGGTTCTTCTTCATGGAAACGTCTGCTTTAGACTCAACGAATGTTAAAAAGGCTTTCGAGATAGTGATCCGAGAAATATACAACAATGTGAGCAGGAAGGTCCTGAACTCAGATACCTACAAAGCAGAATTATCGGTCAACCGGGTGAGCCTCGTCAAGGACGGTGGATCGAAGCAATCAGAAAGCTATTTGTCTTGCTGTTCCAGGTGA

Protein sequence

MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR

Homology

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BLAST of Cp4.1LG03g12300 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-97
Identity = 183/216 (84.72%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR V+VEEG +LAE EG FFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVKDGGSKQSESY-LSCCS 217
           LNSDTYK ELS+ NRVSLVKD     ++ +  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

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BLAST of Cp4.1LG03g12300 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-95
Identity = 181/216 (83.80%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR V+VEEG +LAE EG FF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKD--GGSKQSESYLSCCS 217
           LNSDTYK EL+VNRVSLVKD    SKQS  + SCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 216

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BLAST of Cp4.1LG03g12300 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 6.1e-93
Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA+M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR V+VEEG SLAE+EG FFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           LNSD+YK EL+VNRVSLVK+    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

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BLAST of Cp4.1LG03g12300 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-87
Identity = 167/214 (78.04%), Postives = 190/214 (88.79%), Query Frame = 1


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA+MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR V+VEEG +LAE EG FFMETSALD+TNV KAFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVKD-GGSKQSESYLSCCSR 218
           SD YKAELSVNRVSLV +  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-71
Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+V+  EG +LAEA+G FFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELSVNRVSLVKDGGSKQSESYLSCCS 217
           +S        A LS  +  ++   G  + +    CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

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BLAST of Cp4.1LG03g12300 vs. TrEMBL
Match: A0A0A0KU21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017180 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-111
Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDV+VE+GTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TrEMBL
Match: B9SN17_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1518710 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-105
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVTVEEG SLAEAEG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDG-GSKQSESYL-SCCSR 218
           LNSDTYKAELS+NRV+LV +  GSKQS+SY  SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNSDGSKQSQSYFSSCCSR 218

[Close]

BLAST of Cp4.1LG03g12300 vs. TrEMBL
Match: A0A067L385_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23819 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.7e-105
Identity = 202/218 (92.66%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDV+VEEG SLAE EG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDG--GSKQSESYL-SCCSR 218
           LNSDTYKAELS+NRV+LV +G  GSKQS+ YL SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGTDGSKQSQGYLSSCCSR 219

[Close]

BLAST of Cp4.1LG03g12300 vs. TrEMBL
Match: B9IAD0_POPTR (Ras-related protein ARA-4 OS=Populus trichocarpa GN=POPTR_0014s14790g PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 9.1e-104
Identity = 197/216 (91.20%), Postives = 206/216 (95.37%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSD+EGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVA M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDV+VEE   LAEAEG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDGG-SKQSESYLSCCSR 218
           LNSDTYKAELS+NRV+LV +G  SKQ++SY SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGNDSKQAQSYFSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TrEMBL
Match: A0A0S3RQR9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G002400 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 8.5e-102
Identity = 194/219 (88.58%), Postives = 204/219 (93.15%), Query Frame = 1


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           M  SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN+HSKATIGVEFQTQ ++ID K
Sbjct: 1   MWGSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTH DTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIR V+VEEG SLAEAEG FFMETSALDSTNVK AFE+VIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRAVSVEEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDG--GSKQSESYLSCCSR 218
           KVLNSDTYKAELSVNRVSLV +G   SKQ+++Y SCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGPAASKQNQTYFSCCSR 219

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 356.3 bits (913), Expect = 1.3e-98
Identity = 183/216 (84.72%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRSTF+SVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLE+IR V+VEEG +LAE EG FFMETSALDSTNVK AFE+VIR+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDTYKAELSV-NRVSLVKDGGSKQSESY-LSCCS 217
           LNSDTYK ELS+ NRVSLVKD     ++ +  SCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 348.6 bits (893), Expect = 2.8e-96
Identity = 181/216 (83.80%), Postives = 197/216 (91.20%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR+TF+SVGRWLDELK HSDTTVARM
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIR V+VEEG +LAE EG FF+ETSALDSTNVK AFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDTYKAELSVNRVSLVKD--GGSKQSESYLSCCS 217
           LNSDTYK EL+VNRVSLVKD    SKQS  + SCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGF-SCCS 259

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 341.7 bits (875), Expect = 3.4e-94
Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R STF++VGRWLDEL THSDTTVA+M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           L+GNKCDLE+IR V+VEEG SLAE+EG FFMETSALDSTNVK AFE+VIREIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           LNSD+YK EL+VNRVSLVK+    +     SCCSR
Sbjct: 182 LNSDSYKEELTVNRVSLVKN--ENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 324.3 bits (830), Expect = 5.6e-89
Identity = 167/214 (78.04%), Postives = 190/214 (88.79%), Query Frame = 1


Query: 5   DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKA 64
           +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  TF+SV RWL EL TH DT VA+MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN 184
           GNKCDLE+IR V+VEEG +LAE EG FFMETSALD+TNV KAFEIVIREI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDTYKAELSVNRVSLVKD-GGSKQSESYLSCCSR 218
           SD YKAELSVNRVSLV +  GS+ S    SCCSR
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 270.4 bits (690), Expect = 9.7e-73
Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 4   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
           S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+K
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARML 123
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S+GRWL+EL THSD  V  +L
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 124 VGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 183
           VGNK DL+++R+V+  EG +LAEA+G FFMETSALDS+NV  AFE V++EIYN +SRKV+
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 184 NSDTYK----AELSVNRVSLVKDGGSKQSESYLSCCS 217
           +S        A LS  +  ++   G  + +    CCS
Sbjct: 185 SSQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: gi|659107919|ref|XP_008453919.1| (PREDICTED: ras-related protein RABA5d [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 3.4e-112
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDVTVEEGTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVTVEEGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: gi|449468736|ref|XP_004152077.1| (PREDICTED: ras-related protein RABA5d [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 2.2e-111
Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
           MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK
Sbjct: 1   MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
           EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120

Query: 121 RMLVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSR 180
            MLVGNKCDLENIRDV+VE+GTSLAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSR
Sbjct: 121 MMLVGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSR 180

Query: 181 KVLNSDTYKAELSVNRVSLVKDGGSKQSESYLSCCSR 218
           KVLNSDTYKAELSVNRVSLV +GGSKQSE YLSCCSR
Sbjct: 181 KVLNSDTYKAELSVNRVSLVNNGGSKQSEGYLSCCSR 217

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: gi|255572910|ref|XP_002527386.1| (PREDICTED: ras-related protein RABA5d [Ricinus communis])

HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-105
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDVTVEEG SLAEAEG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDG-GSKQSESYL-SCCSR 218
           LNSDTYKAELS+NRV+LV +  GSKQS+SY  SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNSDGSKQSQSYFSSCCSR 218

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: gi|802560037|ref|XP_012066252.1| (PREDICTED: ras-related protein RABA5e [Jatropha curcas])

HSP 1 Score: 389.0 bits (998), Expect = 5.3e-105
Identity = 202/218 (92.66%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDSVGRWLDELKTHSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDV+VEEG SLAE EG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDG--GSKQSESYL-SCCSR 218
           LNSDTYKAELS+NRV+LV +G  GSKQS+ YL SCCSR
Sbjct: 182 LNSDTYKAELSLNRVTLVNNGTDGSKQSQGYLSSCCSR 219

[Close]

BLAST of Cp4.1LG03g12300 vs. NCBI nr
Match: gi|743912236|ref|XP_010999992.1| (PREDICTED: ras-related protein RABA5d-like [Populus euphratica])

HSP 1 Score: 388.3 bits (996), Expect = 9.0e-105
Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 3   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV 62
           SSD+EGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQ M+IDGKEV
Sbjct: 2   SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQTMEIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVARM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+TFDS+GRWLDEL+THSDTTVARM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSIGRWLDELQTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVTVEEGTSLAEAEGFFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 182
           LVGNKCDLENIRDV+VEEG SLAEAEG FFMETSALDSTNVKKAFEIVIREIYNNVSRKV
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181

Query: 183 LNSDTYKAELSVNRVSLVKDGG-SKQSESYLSCCSR 218
           LNSD+YKAELS+NRV+LV +G  SKQ++SY SCCSR
Sbjct: 182 LNSDSYKAELSLNRVNLVNNGNDSKQAQSYFSCCSR 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA5D_ARATH	2.4e-97	84.72	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1	[more]
RAA5E_ARATH	5.0e-95	83.80	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	[more]
RAA5C_ARATH	6.1e-93	81.40	Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1	[more]
RAA5B_ARATH	1.0e-87	78.04	Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1	[more]
RAA5A_ARATH	1.7e-71	64.52	Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1	[more]

BLAST of Cp4.1LG03g12300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU21_CUCSA	1.5e-111	96.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017180 PE=4 SV=1	[more]
B9SN17_RICCO	1.3e-105	93.55	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1518710 PE=4 SV=1	[more]
A0A067L385_JATCU	3.7e-105	92.66	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23819 PE=4 SV=1	[more]
B9IAD0_POPTR	9.1e-104	91.20	Ras-related protein ARA-4 OS=Populus trichocarpa GN=POPTR_0014s14790g PE=4 SV=1	[more]
A0A0S3RQR9_PHAAN	8.5e-102	88.58	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G002400 PE=...	[more]

BLAST of Cp4.1LG03g12300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31680.1	1.3e-98	84.72	RAB GTPase homolog A5D	[more]
AT1G05810.1	2.8e-96	83.80	RAB GTPase homolog A5E	[more]
AT2G43130.1	3.4e-94	81.40	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G07410.1	5.6e-89	78.04	RAB GTPase homolog A5B	[more]
AT5G47520.1	9.7e-73	64.52	RAB GTPase homolog A5A	[more]

BLAST of Cp4.1LG03g12300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107919\|ref\|XP_008453919.1\|	3.4e-112	97.24	PREDICTED: ras-related protein RABA5d [Cucumis melo]	[more]
gi\|449468736\|ref\|XP_004152077.1\|	2.2e-111	96.31	PREDICTED: ras-related protein RABA5d [Cucumis sativus]	[more]
gi\|255572910\|ref\|XP_002527386.1\|	1.8e-105	93.55	PREDICTED: ras-related protein RABA5d [Ricinus communis]	[more]
gi\|802560037\|ref\|XP_012066252.1\|	5.3e-105	92.66	PREDICTED: ras-related protein RABA5e [Jatropha curcas]	[more]
gi\|743912236\|ref\|XP_010999992.1\|	9.0e-105	91.20	PREDICTED: ras-related protein RABA5d-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12300.1	Cp4.1LG03g12300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 1.4
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 1.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..208 score: 3.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..185 score: 3.75
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 2.6E-40coord: 14..35 score: 2.6E-40coord: 117..130 score: 2.6E-40coord: 55..77 score: 2.6E-40coord: 37..53 score: 2.6
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 6..217 score: 2.3E
None	No IPR available	PANTHER	PTHR24073:SF583	SUBFAMILY NOT NAMED	coord: 6..217 score: 2.3E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 2.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 score: 2.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 2.2E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..208 score: 9.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..215 score: 33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g12300	Cucsa.094350	Cucumber (Gy14) v1	cgycpeB0197
Cp4.1LG03g12300	CmaCh14G015130	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g12300	CmaCh06G016220	Cucurbita maxima (Rimu)	cmacpeB837
Cp4.1LG03g12300	CmoCh06G016180	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g12300	CmoCh14G015460	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g12300	Cla010739	Watermelon (97103) v1	cpewmB606
Cp4.1LG03g12300	Csa4G017180	Cucumber (Chinese Long) v2	cpecuB615
Cp4.1LG03g12300	MELO3C017670	Melon (DHL92) v3.5.1	cpemeB588
Cp4.1LG03g12300	ClCG07G016720	Watermelon (Charleston Gray)	cpewcgB567
Cp4.1LG03g12300	CSPI04G03840	Wild cucumber (PI 183967)	cpecpiB617
Cp4.1LG03g12300	Lsi07G000900	Bottle gourd (USVL1VR-Ls)	cpelsiB513
Cp4.1LG03g12300	MELO3C017670.2	Melon (DHL92) v3.6.1	cpemedB698
Cp4.1LG03g12300	CsaV3_4G003850	Cucumber (Chinese Long) v3	cpecucB0767
Cp4.1LG03g12300	CsGy4G003720	Cucumber (Gy14) v2	cgybcpeB552
Cp4.1LG03g12300	Carg15498	Silver-seed gourd	carcpeB0973
Cp4.1LG03g12300	Carg24803	Silver-seed gourd	carcpeB1446

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g12300	Cucurbita pepo (Zucchini)	cpecpeB482