Csa4G015720 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G015720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNnrU family protein (Precursor); contains IPR009915 (NnrU)
LocationChr4 : 2026417 .. 2029377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAACAATTGACATGACCATTTTTTGTAAGTCAATGATTGGACCCATTGCCGAAATTGTTGTAGTGAAAGAAACGTTTCTCCCAAGTAATTTGCATATAGAGAATTGGTATCACTTATGAGAGTAGCGTAGGCCTGCAATTTGCATATACATAATTCCATAAAATCCAAAACTTCCTTTGAAGAGCACCAATTACCTCAGATTCTCTCTTCCATTTTCCATTCCTCGATTCCTGATTGCCTTCAACCCTCACTTCCCACTCACAACTACCTCACTATTCAGTGCTCCAATGGCGGTTGCCTCCGCCACTCCCCCTTTTTCCCCTCCATTTCTCTCCTCCCCTCGCCATCGCCATCGCCGTCCTGATGCAATTTCCTTCCGACCCTTTTCAATTTCGACCCCCAATTGCCTTCAGCAACTTCCCCTTTCTCTCAATTCCTTCCACATTTTCCGACGTCCTCGATTGGTCGCCGAGGCTTCTATTGGAGACAGGGAGAGTGGTGGGTCGACCTCTGTCTCCGACGACGAGGGCTTTGTCGGCGAGGACGCTGCTGCTTTTGATCTTTCCGAGCAGAAATTGACTTCGTGGGTTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATTGATAACTCTGCTGGGGGTGTTGGGAAGGCCTTTCTGGATGCTGTTTCTGGAATTTCGGATAGTCATGAGGTTCACTTTTTTTGTGTTACTTCGTTTTGTTTAATTTGATTCACATTTGGAGATGAAGCCTGTATAGAAATAGTTCCATTGCCATAGAAGCAGTGTTCATAGTAATTCTGCTGTTTTATAGTTTATATATAGTGTTTCTCTCAGATGGTTTGTACGTGTTGGGTTCGTTGCTAAGACTTTTAGAAAGTTCAATTTTGTCCTTAATTTTAGTAAACTTCTAATGAATATGTAGAAGTTCTAAAATTGTATTCATTTGTAGCATTTTTGGGCTGTCTTGTGATATAGGAATATTTCCAATTCAGTTAGTAAAATATGTACATAACTCACAGATTTTGATAGAAAAATCAATCTTGATACATAAAGGATTGTATTGAAACTACGATCTTATTTGAACGAGATCTGTTTTGTAGGTTGTATATCTCTGTCCTTGAGTTCTAAAGGATTGTATTGAAACTGATTAAGGTCTTGTATGTCTGCTGTATATGAATGATTGGGGTGGATGAACATGGCATAAGGATTATATTGCTCATGGTTTAATGTTGAATTTTGGAAACTCACTTGATTATTTGATTATGAATCTAAGTCTTGAAACTTTCTTCCGTAGGTTGTGATGTTGCTCCTCATATTCATTTTTGCCATTGTCCATAGTGGTTTGGCCAGTCTCCGAGATCAGGGCGAGAAGCTTGTCGGGGAACGAGCTTTTCGGGTTTTGTTTGCTGGAGTTTCTCTGCCATTGGCTGTTAGCACTGTGGTAGGTACCTTACCGCTTCTTTTCCCTTGAACTTGATGCAGTAAATGCAATGTTCTTGAAGTTACCTCAGTACCTTTTATTCATTCAAGTTTTCCGAATGCACACGCATATTGACTTGTTTACACTAAGGAATTATATTCAGGTGTATTTCATTAACCATCGATACGATGGAGTACAGTTATGGCAGCTCCAAAGTGTTCCCCTACTGCATCAACTTGTGTGGCTTAGCTCGTTTGTCTCCTTCATCTTTCTCTATCCTTCAACTTTTAATCTGCTGGAGGTTGCAGCAGTTGATAAACCAAAAATGCACCTTTGGGAAACAGGCATCATTAGAATAACTAGACATCCACAGGTTTGTTCGTGTTTCATTATCTTCAATGTTCATTTCATTTCATTATAATATCCGGGTTCTATTGTTGAGTAGTACTTGGGTGCAGTCTAGGTTGCACCATGTCCATGAGATGACTGTCAATTAAAAATGAAAAAAAATAGAACATAAGACAATCGTTTTTAAAAAGTAAATTTGCTACATGGCAGCTTGTGATTTGCACTTGGGTGGGTTGCACAAGATAGTTGCATCCTAGGATGCTCCCAACTATTTTTCTTTATTAGTGCTAGTTTGCTGGCTTCGACTTGAATTCATCGATGAACTTGAGTTTTAATTTTGTGTACCACTTGAAATACACGTCTCATAGACAAATTTCTTATGTCAAGTGTCCTCAAATAGTAGGGTTGAACAATAAATTAGCCAAATGAAAGCTTAGAAACCATAATATAGGATTTAAAACCAAACTGTATATTGCATTAGACGAGTTTTTTCAGAAGTCACATTTGGTCTTCTAGAATAACACGAGAGAAGATGAAATCCAATTTCGTCCCTCTCTGTTTCCTGATAAAATGTTGATACTTCATGAGGGGAGGTTAAAAAAGACCACCAACCATGAAAAGTCAAACTGACCTGGCAAATCTTGGTTTTCTTTTAAGATGGTTGGACAGGTGATATGGTGTCTTGCTCATACAATCTGGATTGGGAACTCTGTTGCAGTAGCAGCTTCCATTGGTTTGATAGGACATCATCTGTTTGGCGTATGGAACGGAGACAGGAGGCTAGCCAAGCGATATGGGGCAGATTTTGAAGCCGTGAAAAGCCGAACAAGCATCATCCCATTCGCTGCCATTGTGGATGGTCGTCAAAAGTTGCCCGACGATTACTACAAGGAGTTCCTTCGCTTGCCATATCTATCAATCACTGCACTAACAATAGGAGCTTACCTTGCTCACCCTCTTATGCAAGCTGCTAGTTTCAGGCTTCATTGGTAACTCCATTTCTATGCAGCTAACTCTCCTGTTGTATCATAAATACTCAAATGTATTTCATTTGTTGTATAAACCAAAGCATAGAGCATACAGAAATGTGAGGCTATAGTCATAGCCTTTTTTATTACAAAGTTATGAAATAAAAATCATTCAACCTTATAAAACTATAAAAATGCCC

mRNA sequence

ATGGCGGTTGCCTCCGCCACTCCCCCTTTTTCCCCTCCATTTCTCTCCTCCCCTCGCCATCGCCATCGCCGTCCTGATGCAATTTCCTTCCGACCCTTTTCAATTTCGACCCCCAATTGCCTTCAGCAACTTCCCCTTTCTCTCAATTCCTTCCACATTTTCCGACGTCCTCGATTGGTCGCCGAGGCTTCTATTGGAGACAGGGAGAGTGGTGGGTCGACCTCTGTCTCCGACGACGAGGGCTTTGTCGGCGAGGACGCTGCTGCTTTTGATCTTTCCGAGCAGAAATTGACTTCGTGGGTTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATTGATAACTCTGCTGGGGGTGTTGGGAAGGCCTTTCTGGATGCTGTTTCTGGAATTTCGGATAGTCATGAGGTTGTGATGTTGCTCCTCATATTCATTTTTGCCATTGTCCATAGTGGTTTGGCCAGTCTCCGAGATCAGGGCGAGAAGCTTGTCGGGGAACGAGCTTTTCGGGTTTTGTTTGCTGGAGTTTCTCTGCCATTGGCTGTTAGCACTGTGGTGTATTTCATTAACCATCGATACGATGGAGTACAGTTATGGCAGCTCCAAAGTGTTCCCCTACTGCATCAACTTGTGTGGCTTAGCTCGTTTGTCTCCTTCATCTTTCTCTATCCTTCAACTTTTAATCTGCTGGAGGTTGCAGCAGTTGATAAACCAAAAATGCACCTTTGGGAAACAGGCATCATTAGAATAACTAGACATCCACAGATGGTTGGACAGGTGATATGGTGTCTTGCTCATACAATCTGGATTGGGAACTCTGTTGCAGTAGCAGCTTCCATTGGTTTGATAGGACATCATCTGTTTGGCGTATGGAACGGAGACAGGAGGCTAGCCAAGCGATATGGGGCAGATTTTGAAGCCGTGAAAAGCCGAACAAGCATCATCCCATTCGCTGCCATTGTGGATGGTCGTCAAAAGTTGCCCGACGATTACTACAAGGAGTTCCTTCGCTTGCCATATCTATCAATCACTGCACTAACAATAGGAGCTTACCTTGCTCACCCTCTTATGCAAGCTGCTAGTTTCAGGCTTCATTGGTAA

Coding sequence (CDS)

ATGGCGGTTGCCTCCGCCACTCCCCCTTTTTCCCCTCCATTTCTCTCCTCCCCTCGCCATCGCCATCGCCGTCCTGATGCAATTTCCTTCCGACCCTTTTCAATTTCGACCCCCAATTGCCTTCAGCAACTTCCCCTTTCTCTCAATTCCTTCCACATTTTCCGACGTCCTCGATTGGTCGCCGAGGCTTCTATTGGAGACAGGGAGAGTGGTGGGTCGACCTCTGTCTCCGACGACGAGGGCTTTGTCGGCGAGGACGCTGCTGCTTTTGATCTTTCCGAGCAGAAATTGACTTCGTGGGTTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATTGATAACTCTGCTGGGGGTGTTGGGAAGGCCTTTCTGGATGCTGTTTCTGGAATTTCGGATAGTCATGAGGTTGTGATGTTGCTCCTCATATTCATTTTTGCCATTGTCCATAGTGGTTTGGCCAGTCTCCGAGATCAGGGCGAGAAGCTTGTCGGGGAACGAGCTTTTCGGGTTTTGTTTGCTGGAGTTTCTCTGCCATTGGCTGTTAGCACTGTGGTGTATTTCATTAACCATCGATACGATGGAGTACAGTTATGGCAGCTCCAAAGTGTTCCCCTACTGCATCAACTTGTGTGGCTTAGCTCGTTTGTCTCCTTCATCTTTCTCTATCCTTCAACTTTTAATCTGCTGGAGGTTGCAGCAGTTGATAAACCAAAAATGCACCTTTGGGAAACAGGCATCATTAGAATAACTAGACATCCACAGATGGTTGGACAGGTGATATGGTGTCTTGCTCATACAATCTGGATTGGGAACTCTGTTGCAGTAGCAGCTTCCATTGGTTTGATAGGACATCATCTGTTTGGCGTATGGAACGGAGACAGGAGGCTAGCCAAGCGATATGGGGCAGATTTTGAAGCCGTGAAAAGCCGAACAAGCATCATCCCATTCGCTGCCATTGTGGATGGTCGTCAAAAGTTGCCCGACGATTACTACAAGGAGTTCCTTCGCTTGCCATATCTATCAATCACTGCACTAACAATAGGAGCTTACCTTGCTCACCCTCTTATGCAAGCTGCTAGTTTCAGGCTTCATTGGTAA

Protein sequence

MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW*
Homology
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BLAST of Csa4G015720 vs. Swiss-Prot
Match: ZCIS_ARATH (15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana GN=Z-ISO PE=1 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 2.5e-139
Identity = 245/362 (67.68%), Postives = 289/362 (79.83%), Query Frame = 1 

Query: 11  SPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRES 70
           SPP L       RRP+    R    + P       L  +S  + R+  ++  +++ + + 
Sbjct: 10  SPPSLLLLPPSPRRPNLTLIRRIP-AHPRLGNSTSLLSSSSPVIRK--ILVRSTLREDQP 69

Query: 71  GGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAF 130
             S S S     +GED+AAF+L +QKL SWVYF V+LGVVLF+LNVVWIDNS G  GK+F
Sbjct: 70  IASDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVVLGVVLFILNVVWIDNSTG-FGKSF 129

Query: 131 LDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVST 190
           +DAVS IS S EV ML+LI IFAIVHSGLASLRD GEKL+GERAFRVLFAG+SLPLA+ST
Sbjct: 130 IDAVSNISGSPEVAMLMLILIFAIVHSGLASLRDIGEKLIGERAFRVLFAGISLPLAMST 189

Query: 191 VVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWE 250
           +VYFINHRYDG QLWQLQ VP +H+ +W+++FVSF FLYPSTFNLLEVAAVDKPKMHLWE
Sbjct: 190 IVYFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWE 249

Query: 251 TGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGAD 310
           TGI+RITRHPQMVGQ++WCLAHT+WIGN+VA +AS+GLI HHLFG WNGDRRLAKRYG D
Sbjct: 250 TGIMRITRHPQMVGQIVWCLAHTLWIGNTVAASASLGLIAHHLFGAWNGDRRLAKRYGED 309

Query: 311 FEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRL 370
           FE++K RTS+IPFAAI +GRQ LP+DYYKEF+RLPYL+ITALT+GAY AHPLMQ ASFRL
Sbjct: 310 FESIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFRL 367

Query: 371 HW 373
           HW
Sbjct: 370 HW 367

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BLAST of Csa4G015720 vs. Swiss-Prot
Match: ZCIS_MAIZE (15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 3.3e-131
Identity = 234/366 (63.93%), Postives = 274/366 (74.86%), Query Frame = 1 

Query: 11  SPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRES 70
           +PP L   R    RP   +  P     P      PLS    H   RP       I  +E 
Sbjct: 12  TPPLLPHRRPHLARPLCPTLNPIRAPLP------PLSRVLSHA--RPARAVGGGIEPKE- 71

Query: 71  GGSTSVSDDEG----FVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGV 130
            G  +  D+ G     VGED+AAF+L +Q + SW YF  ILG VL  LNV+WID S G V
Sbjct: 72  -GVVAEGDESGGGPVLVGEDSAAFELKDQSVASWAYFAGILGAVLVALNVLWIDPSTG-V 131

Query: 131 GKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPL 190
           G  FLDAV+ +SDSHEVVMLLL  IFA+VHSG+ASLR+ GEK+VGER +RVLFAG+SLPL
Sbjct: 132 GTKFLDAVASVSDSHEVVMLLLTIIFAVVHSGMASLRESGEKIVGERVYRVLFAGISLPL 191

Query: 191 AVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKM 250
           AV+T+VYFINHRYDG QLWQ+Q +  +H+L+W SSF+SF FLYPSTFNLLEVAAVDKPK+
Sbjct: 192 AVTTIVYFINHRYDGTQLWQVQGITGIHELLWFSSFISFFFLYPSTFNLLEVAAVDKPKL 251

Query: 251 HLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKR 310
           H+WETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAAS+GLI HHLFG WNGDRRL  R
Sbjct: 252 HMWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAVAASVGLISHHLFGAWNGDRRLLSR 311

Query: 311 YGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAA 370
           YG  FE +K RTS++PFAAI+DGRQKLP DY+KEF RLPY++IT LT+GAY AHPLMQA+
Sbjct: 312 YGEAFEVLKKRTSVMPFAAIIDGRQKLPKDYHKEFFRLPYVAITMLTLGAYFAHPLMQAS 366

Query: 371 SFRLHW 373
           S++L W
Sbjct: 372 SYQLPW 366

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BLAST of Csa4G015720 vs. TrEMBL
Match: A0A0A0KXF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015720 PE=4 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 2.7e-212
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 1 

Query: 1   MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV 60
           MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV
Sbjct: 1   MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV 60

Query: 61  AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120
           AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID
Sbjct: 61  AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120

Query: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180
           NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA
Sbjct: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180

Query: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA 240
           GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA
Sbjct: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA 240

Query: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300
           VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD
Sbjct: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300

Query: 301 RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360
           RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH
Sbjct: 301 RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360

Query: 361 PLMQAASFRLHW 373
           PLMQAASFRLHW
Sbjct: 361 PLMQAASFRLHW 372

[Close]
BLAST of Csa4G015720 vs. TrEMBL
Match: A0A151U8Y4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019854 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-143
Identity = 256/346 (73.99%), Postives = 291/346 (84.10%), Query Frame = 1 

Query: 32  PFSISTPN-----CLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGSTSVSDDEGFVGED 91
           P S + PN     C   LP   +   I+ R R+VA  SI +RES   +   ++ GFVGED
Sbjct: 29  PISKTNPNQTSHLCFSNLPRWSSKSAIYCR-RVVARTSIRERESEKESESEEELGFVGED 88

Query: 92  AAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDAVSGISDSHEVVML 151
           +AAF L EQKL+SW+YFT ILGVVL+VLNV WIDNS G  GK F+DAVS +SDSHEVVML
Sbjct: 89  SAAFRLGEQKLSSWIYFTAILGVVLYVLNVAWIDNSTG-FGKPFVDAVSTLSDSHEVVML 148

Query: 152 LLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQ 211
           +LI IFA VHSGLAS R+ GEKL+GER FRVLFAG+SLPLAVST+VYFINHRYDG+QLWQ
Sbjct: 149 ILILIFAGVHSGLASFRNTGEKLIGERPFRVLFAGLSLPLAVSTIVYFINHRYDGLQLWQ 208

Query: 212 LQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQV 271
           +Q  P LHQL+WLS+F+SF FLYPSTFNLLEVAAVDKPK+HLWETGIIRITRHPQMVGQV
Sbjct: 209 IQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQMVGQV 268

Query: 272 IWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKSRTSIIPFAAI 331
           IWCLAHT+WIGNSVAVAAS GLI HHLFGVWNGDRRLA +YG +FE VKSRTS+IPFAAI
Sbjct: 269 IWCLAHTLWIGNSVAVAASFGLIAHHLFGVWNGDRRLAIKYGENFELVKSRTSVIPFAAI 328

Query: 332 VDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           +DGRQKLP D+YKEF+RLPYL+ITALT+GAY AHPLMQAAS+ LHW
Sbjct: 329 LDGRQKLPKDFYKEFIRLPYLTITALTLGAYFAHPLMQAASYNLHW 372

[Close]
BLAST of Csa4G015720 vs. TrEMBL
Match: A0A0B2QW68_GLYSO (15-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_025221 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-143
Identity = 262/359 (72.98%), Postives = 295/359 (82.17%), Query Frame = 1 

Query: 22  HRRPD--AISFRPFSISTPN------CLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGS 81
           HRRP   A+S+   SIS  N      C   L  S +   I+ R + VA  SIG+ ES   
Sbjct: 20  HRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCR-KFVARTSIGENESESE 79

Query: 82  TSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDA 141
           +    D G VGED+AAF+L +QK++SW+YFT ILGVVL VLNV WIDNS G  GKAF+DA
Sbjct: 80  SE--KDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKAFIDA 139

Query: 142 VSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVY 201
           VS +SDSHEVVML+LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVSTVVY
Sbjct: 140 VSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVSTVVY 199

Query: 202 FINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGI 261
           FINHRYDG+QLW LQ  P LHQL+WLS+F+SF FLYPSTFNLLEVAAVDKPK+HLWETGI
Sbjct: 200 FINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGI 259

Query: 262 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEA 321
           IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG DFE 
Sbjct: 260 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFEL 319

Query: 322 VKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           VKSRTS++PFAAI+DGRQKLP D+YKEF+RLPYL++TALT+GAY AHPLMQ ASF LHW
Sbjct: 320 VKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNLHW 374

[Close]
BLAST of Csa4G015720 vs. TrEMBL
Match: I1MYD2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G004400 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-143
Identity = 262/359 (72.98%), Postives = 295/359 (82.17%), Query Frame = 1 

Query: 22  HRRPD--AISFRPFSISTPN------CLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGS 81
           HRRP   A+S+   SIS  N      C   L  S +   I+ R + VA  SIG+ ES   
Sbjct: 20  HRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCR-KFVARTSIGENESESE 79

Query: 82  TSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDA 141
           +    D G VGED+AAF+L +QK++SW+YFT ILGVVL VLNV WIDNS G  GKAF+DA
Sbjct: 80  SE--KDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKAFIDA 139

Query: 142 VSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVY 201
           VS +SDSHEVVML+LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVSTVVY
Sbjct: 140 VSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVSTVVY 199

Query: 202 FINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGI 261
           FINHRYDG+QLW LQ  P LHQL+WLS+F+SF FLYPSTFNLLEVAAVDKPK+HLWETGI
Sbjct: 200 FINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGI 259

Query: 262 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEA 321
           IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG DFE 
Sbjct: 260 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFEL 319

Query: 322 VKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           VKSRTS++PFAAI+DGRQKLP D+YKEF+RLPYL++TALT+GAY AHPLMQ ASF LHW
Sbjct: 320 VKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNLHW 374

[Close]
BLAST of Csa4G015720 vs. TrEMBL
Match: A0A068V1H6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042011001 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 4.5e-143
Identity = 262/375 (69.87%), Postives = 299/375 (79.73%), Query Frame = 1 

Query: 8   PPFSPPFLSSPRHRHRRPDA----------ISFRPFSISTPNCLQQLPLSLNSFHIFRRP 67
           P FS P  +SP HR + P             S +P   + PN  Q   L   S +  +RP
Sbjct: 15  PQFSKP--NSPLHRRQAPKTKTPYHSLNPIFSNKPSKTAFPNTPQANSLFFPSTNPRKRP 74

Query: 68  RLVAEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVV 127
            +    ++G++         + E  VGED+A FDLS+Q+++SW+YFT ILG+VLFVLNV 
Sbjct: 75  LI--PLALGNQ-------AEETEFLVGEDSAEFDLSKQRISSWIYFTAILGIVLFVLNVA 134

Query: 128 WIDNSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRV 187
           WIDNS G  GKAF++AVS +SDSHEVVML L  IFA+VHSGLASLRD GEK+VGERA+RV
Sbjct: 135 WIDNSTG-FGKAFINAVSSVSDSHEVVMLTLTLIFAVVHSGLASLRDTGEKIVGERAYRV 194

Query: 188 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLE 247
           LFAG+SLPLAVSTVVYFINHRYDGVQLWQLQ VP LH L+WLS+FVSF FLYPSTFNLLE
Sbjct: 195 LFAGISLPLAVSTVVYFINHRYDGVQLWQLQGVPWLHHLLWLSNFVSFFFLYPSTFNLLE 254

Query: 248 VAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVW 307
           VAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHTIWIGNSVAVAAS+GLIGHHLFGVW
Sbjct: 255 VAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHTIWIGNSVAVAASVGLIGHHLFGVW 314

Query: 308 NGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAY 367
           NGDRRLA RYG  FE VK+RTS+IPFAA++DGRQKLP DYYKEFLRLPYL+IT LT+GAY
Sbjct: 315 NGDRRLAIRYGEAFEVVKNRTSVIPFAAVLDGRQKLPRDYYKEFLRLPYLTITVLTLGAY 374

Query: 368 LAHPLMQAASFRLHW 373
            AHPLMQAASF LHW
Sbjct: 375 FAHPLMQAASFGLHW 377

[Close]
BLAST of Csa4G015720 vs. TAIR10
Match: AT1G10830.1 (AT1G10830.1 15-cis-zeta-carotene isomerase)

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-140
Identity = 245/362 (67.68%), Postives = 289/362 (79.83%), Query Frame = 1 

Query: 11  SPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRES 70
           SPP L       RRP+    R    + P       L  +S  + R+  ++  +++ + + 
Sbjct: 10  SPPSLLLLPPSPRRPNLTLIRRIP-AHPRLGNSTSLLSSSSPVIRK--ILVRSTLREDQP 69

Query: 71  GGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAF 130
             S S S     +GED+AAF+L +QKL SWVYF V+LGVVLF+LNVVWIDNS G  GK+F
Sbjct: 70  IASDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVVLGVVLFILNVVWIDNSTG-FGKSF 129

Query: 131 LDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVST 190
           +DAVS IS S EV ML+LI IFAIVHSGLASLRD GEKL+GERAFRVLFAG+SLPLA+ST
Sbjct: 130 IDAVSNISGSPEVAMLMLILIFAIVHSGLASLRDIGEKLIGERAFRVLFAGISLPLAMST 189

Query: 191 VVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWE 250
           +VYFINHRYDG QLWQLQ VP +H+ +W+++FVSF FLYPSTFNLLEVAAVDKPKMHLWE
Sbjct: 190 IVYFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWE 249

Query: 251 TGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGAD 310
           TGI+RITRHPQMVGQ++WCLAHT+WIGN+VA +AS+GLI HHLFG WNGDRRLAKRYG D
Sbjct: 250 TGIMRITRHPQMVGQIVWCLAHTLWIGNTVAASASLGLIAHHLFGAWNGDRRLAKRYGED 309

Query: 311 FEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRL 370
           FE++K RTS+IPFAAI +GRQ LP+DYYKEF+RLPYL+ITALT+GAY AHPLMQ ASFRL
Sbjct: 310 FESIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFRL 367

Query: 371 HW 373
           HW
Sbjct: 370 HW 367

[Close]
BLAST of Csa4G015720 vs. NCBI nr
Match: gi|449468784|ref|XP_004152101.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis sativus])

HSP 1 Score: 745.7 bits (1924), Expect = 3.8e-212
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 1 

Query: 1   MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV 60
           MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV
Sbjct: 1   MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV 60

Query: 61  AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120
           AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID
Sbjct: 61  AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120

Query: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180
           NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA
Sbjct: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180

Query: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA 240
           GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA
Sbjct: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA 240

Query: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300
           VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD
Sbjct: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300

Query: 301 RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360
           RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH
Sbjct: 301 RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360

Query: 361 PLMQAASFRLHW 373
           PLMQAASFRLHW
Sbjct: 361 PLMQAASFRLHW 372

[Close]
BLAST of Csa4G015720 vs. NCBI nr
Match: gi|659108018|ref|XP_008453974.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis melo])

HSP 1 Score: 704.5 bits (1817), Expect = 9.8e-200
Identity = 354/372 (95.16%), Postives = 356/372 (95.70%), Query Frame = 1 

Query: 1   MAVASATPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLV 60
           MAVASATPPFSPP+LSSPRHR  RPDAIS RPFSIS PNCL QLPLSLNS HIFRRPR  
Sbjct: 1   MAVASATPPFSPPYLSSPRHR--RPDAISLRPFSISAPNCLLQLPLSLNSLHIFRRPRFA 60

Query: 61  AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120
           AEASIGDRESGGSTSVSDDEG VGEDAA FDLSEQKLTSWVYFTVILGVVLFVLNVVWID
Sbjct: 61  AEASIGDRESGGSTSVSDDEGLVGEDAAVFDLSEQKLTSWVYFTVILGVVLFVLNVVWID 120

Query: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180
           NSAGGVGKAFLDAVSGISDSHEVVMLLL  IFAIVHSGLASLRDQGEKLVGERAFRVLFA
Sbjct: 121 NSAGGVGKAFLDAVSGISDSHEVVMLLLTLIFAIVHSGLASLRDQGEKLVGERAFRVLFA 180

Query: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAA 240
           GVSLPLAVSTVVYFINHRYDGVQLWQLQSVP LHQLVWLSSFVSF FLYPSTFNLLEVAA
Sbjct: 181 GVSLPLAVSTVVYFINHRYDGVQLWQLQSVPGLHQLVWLSSFVSFFFLYPSTFNLLEVAA 240

Query: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300
           VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD
Sbjct: 241 VDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGD 300

Query: 301 RRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360
           RRLAKRYG DFEAV+ RTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH
Sbjct: 301 RRLAKRYGVDFEAVQRRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAH 360

Query: 361 PLMQAASFRLHW 373
           PLMQAASFRLHW
Sbjct: 361 PLMQAASFRLHW 370

[Close]
BLAST of Csa4G015720 vs. NCBI nr
Match: gi|720093149|ref|XP_010245966.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 523.9 bits (1348), Expect = 2.4e-145
Identity = 260/355 (73.24%), Postives = 298/355 (83.94%), Query Frame = 1 

Query: 19  RHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGSTSVSD 78
           RH        S + F  + P     + +S+ S    R+  ++A  S+G+ E  GS S   
Sbjct: 26  RHNPSFAHLKSIKSFEFARPTRKNPV-ISVKSLQSCRK--ILAGTSVGETEEKGSVS--- 85

Query: 79  DEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAG-GVGKAFLDAVSGI 138
           DE  VGED+AAFD+ +QKL+SWVYFT ILG VLF L+VVWID+S G GVGKAF+DAV+ +
Sbjct: 86  DEFLVGEDSAAFDIGKQKLSSWVYFTGILGTVLFALDVVWIDSSTGLGVGKAFIDAVASL 145

Query: 139 SDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINH 198
           SDSHEVVML+LIFIFA+VHSG+AS RD GEKL+GERA+RVLFAG+SLPLAVSTVVYFINH
Sbjct: 146 SDSHEVVMLILIFIFAVVHSGMASFRDLGEKLIGERAYRVLFAGISLPLAVSTVVYFINH 205

Query: 199 RYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRIT 258
           RYDG+QLWQLQSVP +HQLVW+SSF+SF FLYPSTFNLLEVAAVDKPKMHLWETGI+RIT
Sbjct: 206 RYDGIQLWQLQSVPGVHQLVWISSFISFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRIT 265

Query: 259 RHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKSR 318
           RHPQMVGQ +WCLAHT+WIGNSVAVAASIGLIGHHLFGVWNGDRRLA RYG  FE VKSR
Sbjct: 266 RHPQMVGQTMWCLAHTLWIGNSVAVAASIGLIGHHLFGVWNGDRRLASRYGEAFEIVKSR 325

Query: 319 TSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           TS+IPF AI+DGRQKL  DYYKEF+RLPY++ITALT+GAY AHPLMQAASFRLHW
Sbjct: 326 TSVIPFGAIIDGRQKLTKDYYKEFIRLPYIAITALTLGAYWAHPLMQAASFRLHW 374

[Close]
BLAST of Csa4G015720 vs. NCBI nr
Match: gi|1021507265|ref|XP_016196953.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Arachis ipaensis])

HSP 1 Score: 518.8 bits (1335), Expect = 7.6e-144
Identity = 256/356 (71.91%), Postives = 295/356 (82.87%), Query Frame = 1 

Query: 17  SPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGSTSV 76
           +P   HR    + F  F+ S     + +P  L+S    RR   V   SI D ++      
Sbjct: 36  NPNQTHRFQKCLLFHHFNSS-----RTIPFLLSS----RRGFDVVRTSIRDADA----ET 95

Query: 77  SDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDAVSG 136
             D   VGED+AAF+L +QKL+SWVYF+VILG VLFVLNV WID+S G  GKAF+DAVSG
Sbjct: 96  EQDSSLVGEDSAAFELGQQKLSSWVYFSVILGTVLFVLNVAWIDDSTG-FGKAFVDAVSG 155

Query: 137 ISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFIN 196
           +SDSHEVVML+LI IFA VHSGLASLRD GEKL+GERA+RVLFAG+SLPLA+ST+VYFIN
Sbjct: 156 VSDSHEVVMLILILIFACVHSGLASLRDSGEKLIGERAYRVLFAGISLPLALSTIVYFIN 215

Query: 197 HRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRI 256
           HRYDGVQLWQLQS P +H+LVW+S+F+SF FLYPSTFNLLEVAAVDKPK+HLWETGIIRI
Sbjct: 216 HRYDGVQLWQLQSAPGVHELVWISNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRI 275

Query: 257 TRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKS 316
           TRHPQMVGQV+WCLAHTIWIGNSVA+AASIGLI HHLFGVWNGDRRLA RYG DFE VK 
Sbjct: 276 TRHPQMVGQVMWCLAHTIWIGNSVAIAASIGLIAHHLFGVWNGDRRLALRYGEDFELVKG 335

Query: 317 RTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           RTS++PFAAI+DGRQKLP D+YKEF+R+PYL+ITA+T+GAY AHPLMQAASFRLHW
Sbjct: 336 RTSVVPFAAIIDGRQKLPKDFYKEFIRVPYLAITAMTLGAYFAHPLMQAASFRLHW 377

[Close]
BLAST of Csa4G015720 vs. NCBI nr
Match: gi|356569844|ref|XP_003553105.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Glycine max])

HSP 1 Score: 516.9 bits (1330), Expect = 2.9e-143
Identity = 262/359 (72.98%), Postives = 295/359 (82.17%), Query Frame = 1 

Query: 22  HRRPD--AISFRPFSISTPN------CLQQLPLSLNSFHIFRRPRLVAEASIGDRESGGS 81
           HRRP   A+S+   SIS  N      C   L  S +   I+ R + VA  SIG+ ES   
Sbjct: 20  HRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCR-KFVARTSIGENESESE 79

Query: 82  TSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGVGKAFLDA 141
           +    D G VGED+AAF+L +QK++SW+YFT ILGVVL VLNV WIDNS G  GKAF+DA
Sbjct: 80  SE--KDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKAFIDA 139

Query: 142 VSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVY 201
           VS +SDSHEVVML+LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVSTVVY
Sbjct: 140 VSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVSTVVY 199

Query: 202 FINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGI 261
           FINHRYDG+QLW LQ  P LHQL+WLS+F+SF FLYPSTFNLLEVAAVDKPK+HLWETGI
Sbjct: 200 FINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGI 259

Query: 262 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEA 321
           IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG DFE 
Sbjct: 260 IRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFEL 319

Query: 322 VKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 373
           VKSRTS++PFAAI+DGRQKLP D+YKEF+RLPYL++TALT+GAY AHPLMQ ASF LHW
Sbjct: 320 VKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNLHW 374

The following BLAST results are available for this feature:
BLAST of Csa4G015720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZCIS_ARATH2.5e-13967.6815-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana GN=Z-ISO P... [more]
ZCIS_MAIZE3.3e-13163.9315-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays PE=1 SV=1[more]
BLAST of Csa4G015720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXF1_CUCSA2.7e-212100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015720 PE=4 SV=1[more]
A0A151U8Y4_CAJCA2.0e-14373.99Uncharacterized protein OS=Cajanus cajan GN=KK1_019854 PE=4 SV=1[more]
A0A0B2QW68_GLYSO2.0e-14372.9815-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_025221 ... [more]
I1MYD2_SOYBN2.0e-14372.98Uncharacterized protein OS=Glycine max GN=GLYMA_18G004400 PE=4 SV=1[more]
A0A068V1H6_COFCA4.5e-14369.87Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042011001 PE=4 SV=1[more]
BLAST of Csa4G015720 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10830.11.4e-14067.68 15-cis-zeta-carotene isomerase[more]
BLAST of Csa4G015720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468784|ref|XP_004152101.1|3.8e-212100.00PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis sativus][more]
gi|659108018|ref|XP_008453974.1|9.8e-20095.16PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis melo][more]
gi|720093149|ref|XP_010245966.1|2.4e-14573.24PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nelumbo nucifera][more]
gi|1021507265|ref|XP_016196953.1|7.6e-14471.91PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Arachis ipaensis][more]
gi|356569844|ref|XP_003553105.1|2.9e-14372.98PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009915NnrU_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016853 isomerase activity
molecular_function GO:0090471 9,15,9'-tri-cis-zeta-carotene isomerase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093752cucumber EST collection version 3.0transcribed_cluster
CU115534cucumber EST collection version 3.0transcribed_cluster
CU116369cucumber EST collection version 3.0transcribed_cluster
CU118361cucumber EST collection version 3.0transcribed_cluster
CU135369cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G015720.1Csa4G015720.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU093752CU093752transcribed_cluster
CU116369CU116369transcribed_cluster
CU135369CU135369transcribed_cluster
CU118361CU118361transcribed_cluster
CU115534CU115534transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009915NnrU domainPFAMPF07298NnrUcoord: 144..363
score: 1.6
NoneNo IPR availablePANTHERPTHR35988FAMILY NOT NAMEDcoord: 5..372
score: 1.4E
NoneNo IPR availablePANTHERPTHR35988:SF215-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTICcoord: 5..372
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G015720Cla010839Watermelon (97103) v1cuwmB308
Csa4G015720MELO3C017709Melon (DHL92) v3.5.1cumeB305
Csa4G015720ClCG07G015730Watermelon (Charleston Gray)cuwcgB328
Csa4G015720Lsi07G000530Bottle gourd (USVL1VR-Ls)culsiB316
Csa4G015720MELO3C017709.2Melon (DHL92) v3.6.1cumedB292
Csa4G015720Cla97C07G142750Watermelon (97103) v2cuwmbB325
Csa4G015720Bhi01G002094Wax gourdcuwgoB372
Csa4G015720CSPI04G03380Wild cucumber (PI 183967)cpicuB182
Csa4G015720Cucsa.094780Cucumber (Gy14) v1cgycuB102
Csa4G015720Cp4.1LG08g05840Cucurbita pepo (Zucchini)cpecuB869
Csa4G015720CsGy4G003270Cucumber (Gy14) v2cgybcuB165
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G015720Cucurbita maxima (Rimu)cmacuB260
Csa4G015720Cucurbita maxima (Rimu)cmacuB835
Csa4G015720Cucurbita moschata (Rifu)cmocuB245
Csa4G015720Cucurbita moschata (Rifu)cmocuB823
Csa4G015720Melon (DHL92) v3.5.1cumeB312
Csa4G015720Melon (DHL92) v3.5.1cumeB320
Csa4G015720Watermelon (Charleston Gray)cuwcgB320
Csa4G015720Watermelon (97103) v1cuwmB313
Csa4G015720Cucurbita pepo (Zucchini)cpecuB615
Csa4G015720Bottle gourd (USVL1VR-Ls)culsiB303
Csa4G015720Bottle gourd (USVL1VR-Ls)culsiB311
Csa4G015720Cucumber (Gy14) v2cgybcuB172
Csa4G015720Melon (DHL92) v3.6.1cumedB297
Csa4G015720Melon (DHL92) v3.6.1cumedB309
Csa4G015720Silver-seed gourdcarcuB0215
Csa4G015720Silver-seed gourdcarcuB0716
Csa4G015720Watermelon (97103) v2cuwmbB317
Csa4G015720Wax gourdcuwgoB377