BLAST of Csa3G890050 vs. Swiss-Prot
Match:
PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)
HSP 1 Score: 561.2 bits (1445), Expect = 1.1e-158
Identity = 267/494 (54.05%), Postives = 362/494 (73.28%), Query Frame = 1
Query: 9 RFKNLAIGWVSKTVIS--KSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHA 68
RF + + WVS S K S ++ ++ K+ +ISHE+A+ L+K ERDPQ
Sbjct: 13 RFSSSSRSWVSPICFSEKKKKPSPPPESSISPVETNPKTKFISHESAVSLMKRERDPQGV 72
Query: 69 LDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMK 128
LDIFN S+Q+GFNHN+ATY+ ++ NL ++KKF A+D +LHQM Y+TC+ E +FLNLM+
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 129 HFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNL 188
HFS+S +H++V++MF I+ I R KPSL AISTCLNLL++S V+L+RKLL+ A+ L L
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 189 RPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAI 248
+PNTCIFNILVKHHC+NGD+ AF VV+EMK + +SYPN +TYSTL+ L + + KEA+
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 249 EFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNG 308
E FE+M+SK+ I PD +T+N++INGFC+ G+V+RA+ IL+FMK NGC+PNV+NYS LMNG
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 309 YCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRAD 368
+CK G++QEAK+ F+E+K G+K DT+ YTTL+NC CR G DEA +LL +MK CRAD
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 369 TVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLG 428
T+T+NV+L GL EGR +EAL M+ + EG +LNKGSYRI+LN L GEL KA + L
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 429 LMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRER 488
+M RG PHHAT N L++ LC +G + V L+G L +G P +SW +V+ IC+ER
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 492
Query: 489 KMLPVFELLDVLVT 501
K++ VFELLD LV+
Sbjct: 493 KLVHVFELLDSLVS 506
BLAST of Csa3G890050 vs. Swiss-Prot
Match:
PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 6.2e-56
Identity = 144/459 (31.37%), Postives = 231/459 (50.33%), Query Frame = 1
Query: 45 SSYISHETAIKLIKNERDPQHALDIFNMVSEQ--QGFNHNHATYASIIQNLAKYKKFQAI 104
S I+ IKL++ E+D + ++ +F+ + + G+ H+ +++ ++ L KF+A
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA 70
Query: 105 DGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLN 164
+ ++ +M + C V E I L++ + + + L +F+ +K + PS KA T L
Sbjct: 71 EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD-PSQKAYVTVLA 130
Query: 165 LLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRN-GDLQAAFEVVKEMKSARV 224
+LVE ++++LA K N R ++ L P N+L+K CRN G + A ++ EM R
Sbjct: 131 ILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK-RG 190
Query: 225 SYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRA 284
P+ TY TLI GLC G++ EA + F EMV KD P +TY LING C VD A
Sbjct: 191 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEA 250
Query: 285 RTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINC 344
LE MKS G PNVF YS LM+G CK+GR +A E+F + + G +P+ ++YTTLI
Sbjct: 251 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 310
Query: 345 LCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLN 404
LC+ ++ EA ELL +M + + D + ++ G C +F EA + + ++ G N
Sbjct: 311 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 370
Query: 405 KGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLL 464
+ ++ I H TSN ++ LC N A L
Sbjct: 371 RLTWNI----------------------------HVKTSNEVVRGLCAN-YPSRAFTLYL 430
Query: 465 GLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVT 501
+ G E E+ +LV +C++ + +L+D +VT
Sbjct: 431 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
HSP 2 Score: 116.3 bits (290), Expect = 9.6e-25
Identity = 71/281 (25.27%), Postives = 139/281 (49.47%), Query Frame = 1
Query: 152 PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFE 211
P T ++ L R+D A+KL K + P + L+ C + ++ A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLINGLCGSKNVDEAMR 249
Query: 212 VVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271
++EMKS + PN+ TYS+L+ GLC++G+ +A+E FE M+++ P+ +TY LI G
Sbjct: 250 YLEEMKSKGIE-PNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRPNMVTYTTLITG 309
Query: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPD 331
C+ K+ A +L+ M G P+ Y +++G+C + +EA +E+ G+ P+
Sbjct: 310 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 369
Query: 332 TISY-------TTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFD 391
+++ ++ LC A L M+ + + T ++ LC++G F
Sbjct: 370 RLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ 429
Query: 392 EALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELL 426
+A+ +V ++ +G +KG++++++ K + +A++ L
Sbjct: 430 KAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
HSP 3 Score: 79.7 bits (195), Expect = 1.0e-13
Identity = 77/314 (24.52%), Postives = 135/314 (42.99%), Query Frame = 1
Query: 56 LIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCK 115
L +N+ L IF + ++G + + TY ++I L ++ + + +M C
Sbjct: 166 LCRNDGTVDAGLKIF-LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 225
Query: 116 VHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARK 175
+ +L+ S + + +KS E P++ S+ ++ L + R A +
Sbjct: 226 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE-PNVFTYSSLMDGLCKDGRSLQAME 285
Query: 176 LLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGG 235
L ++ RPN + L+ C+ +Q A E++ M + P+ Y +I G
Sbjct: 286 LFEMMMAR-GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK-PDAGLYGKVISG 345
Query: 236 LCENGKLKEAIEFFEEMVSKDNILPDALTYNI-------LINGFCQRGKVDRARTILEFM 295
C K +EA F +EM+ I P+ LT+NI ++ G C RA T+ M
Sbjct: 346 FCAISKFREAANFLDEMI-LGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSM 405
Query: 296 KSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRV 355
+S G S V L+ CK+G Q+A ++ +EI + G P ++ LI V
Sbjct: 406 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 465
Query: 356 DEATELLQQMKDKD 363
EA++ L ++D D
Sbjct: 466 GEASDTL--LRDLD 471
BLAST of Csa3G890050 vs. Swiss-Prot
Match:
PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 4.4e-54
Identity = 111/309 (35.92%), Postives = 182/309 (58.90%), Query Frame = 1
Query: 188 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIE 247
P+ +N+++ +C+ G++ A V+ M + P++VTY+T++ LC++GKLK+A+E
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAME 229
Query: 248 FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGY 307
+ M+ +D PD +TY ILI C+ V A +L+ M+ GC+P+V Y+VL+NG
Sbjct: 230 VLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 289
Query: 308 CKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADT 367
CKEGRL EA + N++ S G +P+ I++ ++ +C TGR +A +LL M K
Sbjct: 290 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 349
Query: 368 VTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGL 427
VTFN+++ LCR+G A+D+++K+P G N SY +L+ ++ ++ +A E L
Sbjct: 350 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 409
Query: 428 MLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERK 487
M++RG P T NT+L LC +G V+DAVE L L G P ++ T++D + + K
Sbjct: 410 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 469
Query: 488 MLPVFELLD 497
+LLD
Sbjct: 470 TGKAIKLLD 473
HSP 2 Score: 190.7 bits (483), Expect = 4.0e-47
Identity = 99/300 (33.00%), Postives = 169/300 (56.33%), Query Frame = 1
Query: 202 RNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPD 261
R G+L+ F+ ++ M + P+++ +TLI G C GK ++A + E ++ +PD
Sbjct: 114 RTGELEEGFKFLENMVY-HGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPD 173
Query: 262 ALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFN 321
+TYN++I+G+C+ G+++ A ++L+ M SP+V Y+ ++ C G+L++A EV +
Sbjct: 174 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 233
Query: 322 EIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREG 381
+ PD I+YT LI CR V A +LL +M+D+ C D VT+NV++ G+C+EG
Sbjct: 234 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 293
Query: 382 RFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSN 441
R DEA+ + +P G N ++ I+L + G A +LL ML +GF P T N
Sbjct: 294 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 353
Query: 442 TLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQ 501
L+ LC G++ A++ L + + G +P S+ L+ C+E+KM E L+ +V++
Sbjct: 354 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
HSP 3 Score: 186.0 bits (471), Expect = 9.9e-46
Identity = 118/400 (29.50%), Postives = 210/400 (52.50%), Query Frame = 1
Query: 73 VSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSS 132
V ++ + + TY +I+++L K + VL +M C + L++ + S
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 133 MHERVLDMFYAIKSI--VREK---PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLR 192
+ +A+K + +R++ P + + +N + + R+D A K L N +
Sbjct: 254 ------GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL-NDMPSSGCQ 313
Query: 193 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIE 252
PN NI+++ C G A +++ +M S P++VT++ LI LC G L AI+
Sbjct: 314 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAID 373
Query: 253 FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGY 312
E+M + P++L+YN L++GFC+ K+DRA LE M S GC P++ Y+ ++
Sbjct: 374 ILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 433
Query: 313 CKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADT 372
CK+G++++A E+ N++ S G P I+Y T+I+ L + G+ +A +LL +M+ KD + DT
Sbjct: 434 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 493
Query: 373 VTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGL 432
+T++ ++GGL REG+ DEA+ + G N ++ ++ L + + +A + L
Sbjct: 494 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 553
Query: 433 MLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMG 468
M+NRG P+ + L+ L GM K+A+E L L G
Sbjct: 554 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
HSP 4 Score: 174.1 bits (440), Expect = 3.9e-42
Identity = 91/338 (26.92%), Postives = 182/338 (53.85%), Query Frame = 1
Query: 161 LNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSAR 220
L +V + ++ K L N N+ P+ L++ CR G + A ++++ ++ +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 168
Query: 221 VSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDR 280
+ P+++TY+ +I G C+ G++ A+ + M ++ PD +TYN ++ C GK+ +
Sbjct: 169 -AVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQ 228
Query: 281 ARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLIN 340
A +L+ M C P+V Y++L+ C++ + A ++ +E++ G PD ++Y L+N
Sbjct: 229 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 288
Query: 341 CLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYL 400
+C+ GR+DEA + L M C+ + +T N++L +C GR+ +A ++ + +GF
Sbjct: 289 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 348
Query: 401 NKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESL 460
+ ++ I++NFL +KG L +A ++L M G P+ + N LL C + A+E L
Sbjct: 349 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 408
Query: 461 LGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVL 499
++ G P+ ++ T++ +C++ K+ E+L+ L
Sbjct: 409 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
BLAST of Csa3G890050 vs. Swiss-Prot
Match:
PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 1.1e-52
Identity = 131/455 (28.79%), Postives = 233/455 (51.21%), Query Frame = 1
Query: 50 HETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQM 109
H TA+ IK ++DP AL++FN + ++ GF H +TY S+I+ L Y KF+A++ VL M
Sbjct: 9 HVTAV--IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 68
Query: 110 TYDTCK-VHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESD 169
+ + EG+++ MK++ + + +++F + E P++ + + +++LV+S
Sbjct: 69 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSVLVDSG 128
Query: 170 RVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVT 229
D A K+ + R + + P+ F I +K C+ AA ++ M S N+V
Sbjct: 129 YFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM-NVVA 188
Query: 230 YSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFM 289
Y T++GG E E E F +M++ L + T+N L+ C++G V +L+ +
Sbjct: 189 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS-TFNKLLRVLCKKGDVKECEKLLDKV 248
Query: 290 KSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRV 349
G PN+F Y++ + G C+ G L A + + G KPD I+Y LI LC+ +
Sbjct: 249 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 308
Query: 350 DEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIV 409
EA L +M ++ D+ T+N ++ G C+ G A +V F GF ++ +YR +
Sbjct: 309 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 368
Query: 410 LNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGF 469
++ L +GE +A L L +G P+ NTL+ L N GM+ +A + + E G
Sbjct: 369 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 428
Query: 470 KPEHESWFTLVDLICRERKMLPVFELLDVLVTQEY 504
PE +++ LV+ +C+ + L+ V++++ Y
Sbjct: 429 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
HSP 2 Score: 178.7 bits (452), Expect = 1.6e-43
Identity = 108/343 (31.49%), Postives = 183/343 (53.35%), Query Frame = 1
Query: 154 LKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVV 213
L + L +L + V KLL K + PN +N+ ++ C+ G+L A +V
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKV-IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 275
Query: 214 KEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFC 273
+ P+++TY+ LI GLC+N K +EA + +MV+ + + PD+ TYN LI G+C
Sbjct: 276 GCLIEQGPK-PDVITYNNLIYGLCKNSKFQEAEVYLGKMVN-EGLEPDSYTYNTLIAGYC 335
Query: 274 QRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTI 333
+ G V A I+ NG P+ F Y L++G C EG A +FNE G+KP+ I
Sbjct: 336 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 395
Query: 334 SYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKL 393
Y TLI L G + EA +L +M +K + TFN+++ GLC+ G +A +V+ +
Sbjct: 396 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 455
Query: 394 PFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMV 453
+G++ + ++ I+++ + + ++ A E+L +ML+ G P T N+LL LC
Sbjct: 456 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 515
Query: 454 KDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLD 497
+D +E+ ++E G P ++ L++ +CR RK+ LL+
Sbjct: 516 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
HSP 3 Score: 142.1 bits (357), Expect = 1.6e-32
Identity = 108/437 (24.71%), Postives = 203/437 (46.45%), Query Frame = 1
Query: 39 IQKKSKSSYISHETAIK-LIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYK 98
I++ K I++ I L KN + + + + MV+E G + TY ++I K
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE--GLEPDSYTYNTLIAGYCKGG 337
Query: 99 KFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAI--KSIVREKPSLK 158
Q + ++ ++ + + +L+ R L +F K I KP++
Sbjct: 338 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI---KPNVI 397
Query: 159 AISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKE 218
+T + L + L L N S+ L P FNILV C+ G + A +VK
Sbjct: 398 LYNTLIKGLSNQGMI-LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 457
Query: 219 MKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQR 278
M S + +P++ T++ LI G K++ A+E + M+ + + PD TYN L+NG C+
Sbjct: 458 MIS-KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD-NGVDPDVYTYNSLLNGLCKT 517
Query: 279 GKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISY 338
K + + M GC+PN+F +++L+ C+ +L EA + E+K+ + PD +++
Sbjct: 518 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 577
Query: 339 TTLINCLCRTGRVDEATELLQQMKDK-DCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 398
TLI+ C+ G +D A L ++M++ + T T+N+++ + A + Q++
Sbjct: 578 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 637
Query: 399 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVK 458
+ +YR++++ + G + + L M+ GF+P T ++ LC V
Sbjct: 638 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 697
Query: 459 DAVESLLGLLEMGFKPE 472
+A + +++ G PE
Sbjct: 698 EAAGIIHRMVQKGLVPE 706
HSP 4 Score: 92.4 bits (228), Expect = 1.5e-17
Identity = 64/245 (26.12%), Postives = 118/245 (48.16%), Query Frame = 1
Query: 123 NLMKHFSKSSMHERVLDMFYAIKSIVRE--KPSLKAISTCLNLLVESDRVDLARKLLVNA 182
+L+ K+S E V++ + K++V + P+L + L L ++D A LL
Sbjct: 501 SLLNGLCKTSKFEDVMETY---KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 560
Query: 183 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 242
++K ++ P+ F L+ C+NGDL A+ + ++M+ A + TY+ +I E
Sbjct: 561 KNK-SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 620
Query: 243 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 302
+ A + F+EMV + + PD TY ++++GFC+ G V+ L M NG P++
Sbjct: 621 NVTMAEKLFQEMVDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 680
Query: 303 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATE--LLQQM 362
++N C E R+ EA + + + G+ P+ +N +C + + A +L+ +
Sbjct: 681 GRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDL 734
Query: 363 KDKDC 364
K C
Sbjct: 741 LKKSC 734
BLAST of Csa3G890050 vs. Swiss-Prot
Match:
PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 207.6 bits (527), Expect = 3.2e-52
Identity = 117/442 (26.47%), Postives = 239/442 (54.07%), Query Frame = 1
Query: 48 ISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLH 107
+S + +KL+K+E++P+ A +F+ + G+ H+ Y I++ L++ + + ++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 108 QMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVES 167
+ CK E + L+++K + K+SM ++ LD+F ++ I +P++++ +T LN VE+
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
Query: 168 DRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLV 227
+ L + + PN +N+L+K C+ + + A + M P++
Sbjct: 128 KQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVF 187
Query: 228 TYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILE- 287
+YST+I L + GKL +A+E F+EM S+ + PD YNILI+GF + A + +
Sbjct: 188 SYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 247
Query: 288 FMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTG 347
++ + PNV ++++++G K GR+ + +++ +K + D +Y++LI+ LC G
Sbjct: 248 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 307
Query: 348 RVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYR 407
VD+A + ++ ++ D VT+N MLGG CR G+ E+L++ + + + +N SY
Sbjct: 308 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 367
Query: 408 IVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEM 467
I++ L + G++ +AT + LM +G+ T + LC NG V A+ + +
Sbjct: 368 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 427
Query: 468 GFKPEHESWFTLVDLICRERKM 489
G + ++ +++D +C+++++
Sbjct: 428 GGHLDVYAYASIIDCLCKKKRL 445
HSP 2 Score: 161.4 bits (407), Expect = 2.6e-38
Identity = 121/491 (24.64%), Postives = 237/491 (48.27%), Query Frame = 1
Query: 10 FKNLAIGWVSKTVISKSNTSIRLFATSKE-IQKKSKSSYI----------SHETAIKLIK 69
FK + + + I NT + F +K+ ++ +S +Y ++ IK+
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160
Query: 70 NERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHE 129
+++ + A + + ++ GF + +Y+++I +LAK K + +M+
Sbjct: 161 KKKEFEKARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 220
Query: 130 GIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLV 189
+ L+ F K H+ ++++ + P++K + ++ L + RVD K+
Sbjct: 221 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW- 280
Query: 190 NARSKLNLRPNTCI-FNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLC 249
R K N R ++ L+ C G++ A V E+ + S ++VTY+T++GG C
Sbjct: 281 -ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI-DVVTYNTMLGGFC 340
Query: 250 ENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNV 309
GK+KE++E + M K+++ + ++YNILI G + GK+D A I M + G + +
Sbjct: 341 RCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 400
Query: 310 FNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQ 369
Y + ++G C G + +A V E++S G D +Y ++I+CLC+ R++EA+ L+++
Sbjct: 401 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 460
Query: 370 MKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGE 429
M ++ N ++GGL R+ R EA ++++ G SY I++ L + G+
Sbjct: 461 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 520
Query: 430 LRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFT 489
+A+ + ML G+ P T + LL LC + + A+E L+ G + +
Sbjct: 521 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 580
HSP 3 Score: 139.8 bits (351), Expect = 8.1e-32
Identity = 101/397 (25.44%), Postives = 182/397 (45.84%), Query Frame = 1
Query: 85 TYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAI 144
TY+S+I L + V +++ + + ++ F + + L+++
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW--- 351
Query: 145 KSIVREKPSLKAISTCLNL--LVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCR 204
I+ K S+ +S + + L+E+ ++D A + +K T + I + C
Sbjct: 352 -RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT-YGIFIHGLCV 411
Query: 205 NGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDA 264
NG + A V++E++S+ + ++ Y+++I LC+ +L+EA +EM SK + ++
Sbjct: 412 NGYVNKALGVMQEVESSG-GHLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNS 471
Query: 265 LTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNE 324
N LI G + ++ A L M NGC P V +Y++L+ G CK G+ EA E
Sbjct: 472 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 531
Query: 325 IKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGR 384
+ G KPD +Y+ L+ LCR ++D A EL Q D + N+++ GLC G+
Sbjct: 532 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 591
Query: 385 FDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNT 444
D+A+ ++ + N +Y ++ + G+ +AT + G M G P + NT
Sbjct: 592 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 651
Query: 445 LLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLV 480
++ LC V A+E G P +W LV
Sbjct: 652 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
HSP 4 Score: 109.4 bits (272), Expect = 1.2e-22
Identity = 81/338 (23.96%), Postives = 149/338 (44.08%), Query Frame = 1
Query: 39 IQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKK 98
++ K+ + +S+ IK + A I+ ++ + G+ + TY I L
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGY 410
Query: 99 FQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKA-- 158
GV+ ++ + + +++ K E ++ +K + + L +
Sbjct: 411 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL---VKEMSKHGVELNSHV 470
Query: 159 ISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEM 218
+ + L+ R+ A + K RP +NIL+ C+ G A VKEM
Sbjct: 471 CNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 530
Query: 219 KSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRG 278
P+L TYS L+ GLC + K+ A+E + + + + + D + +NILI+G C G
Sbjct: 531 LENGWK-PDLKTYSILLCGLCRDRKIDLALELWHQFL-QSGLETDVMMHNILIHGLCSVG 590
Query: 279 KVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYT 338
K+D A T++ M+ C+ N+ Y+ LM G+ K G A ++ + +G++PD ISY
Sbjct: 591 KLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 650
Query: 339 TLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 375
T++ LC V A E ++ T+N+++
Sbjct: 651 TIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
BLAST of Csa3G890050 vs. TrEMBL
Match:
A0A0A0LGW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G890050 PE=4 SV=1)
HSP 1 Score: 1005.4 bits (2598), Expect = 2.5e-290
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1
Query: 1 MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE 60
MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE
Sbjct: 1 MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE 60
Query: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI
Sbjct: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
Query: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA
Sbjct: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
Query: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG
Sbjct: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
Query: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY
Sbjct: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
Query: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD
Sbjct: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
Query: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK
Sbjct: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
Query: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD
Sbjct: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
Query: 481 LICRERKMLPVFELLDVLVTQEYL 505
LICRERKMLPVFELLDVLVTQEYL
Sbjct: 481 LICRERKMLPVFELLDVLVTQEYL 504
BLAST of Csa3G890050 vs. TrEMBL
Match:
F6H114_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07250 PE=4 SV=1)
HSP 1 Score: 699.9 bits (1805), Expect = 2.3e-198
Identity = 340/469 (72.49%), Postives = 399/469 (85.07%), Query Frame = 1
Query: 34 ATSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNL 93
AT+ ++ + K +ISHE+AI LIK E DPQ AL+IFN V+EQ+GF+HN+ATYA+I+ L
Sbjct: 78 ATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKL 137
Query: 94 AKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPS 153
AK KKFQAID VLHQMTY+TCK HEGIFLNLMKHFSK S+HERV++MF AI+ IVREKPS
Sbjct: 138 AKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPS 197
Query: 154 LKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVV 213
LKAISTCLNLLVES++VDL RK L+N++ LNL PNTCIFNILVKHHC+NGD+ +AFEVV
Sbjct: 198 LKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVV 257
Query: 214 KEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFC 273
+EMK + VSYPNL+TYSTLI GLC +G+LKEAIE FEEMVSKD ILPDALTYN LINGFC
Sbjct: 258 EEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFC 317
Query: 274 QRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTI 333
KVDRA I+EFMK NGC+PNVFNYS LMNG+CKEGRL+EAKEVF+E+KSLG+KPDT+
Sbjct: 318 HGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTV 377
Query: 334 SYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKL 393
YTTLIN CR GRVDEA ELL+ M++ CRADTVTFNV+LGGLCREGRF+EA M+++L
Sbjct: 378 GYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 437
Query: 394 PFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMV 453
P+EG YLNK SYRIVLN L ++GEL+KAT+L+GLML RG +PH ATSN LL+ LC G V
Sbjct: 438 PYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKV 497
Query: 454 KDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQE 503
DAV +LLGLLE+GFKPE SW LV+LICRERK+LP FELLD LV QE
Sbjct: 498 GDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQE 546
BLAST of Csa3G890050 vs. TrEMBL
Match:
A0A061GZH5_THECC (Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_041049 PE=4 SV=1)
HSP 1 Score: 698.4 bits (1801), Expect = 6.6e-198
Identity = 340/501 (67.86%), Postives = 414/501 (82.63%), Query Frame = 1
Query: 7 SSRFKNLAIGWVSKTVISKSNTSIR-----LFATSKEIQKKSKSSYISHETAIKLIKNER 66
SS + + W+S K+N+ R + T E Q+K + ++SHETAI LIK ER
Sbjct: 16 SSSTSSSLLPWISPLQFLKANSQKRDPPPEIPYTLTESQRKPR--FVSHETAINLIKRER 75
Query: 67 DPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIF 126
DPQ AL+IFN VSEQ+GF+HN+ATY +I+ L + KKFQAID +L QMTY+TCK HEG+F
Sbjct: 76 DPQRALEIFNRVSEQKGFSHNNATYGTILHKLVQSKKFQAIDSILRQMTYETCKFHEGVF 135
Query: 127 LNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNAR 186
LNLMKHFSK S+H+RVL+MFYAI+ IVREKPSLKAISTCLNLL+ES++VDLAR L+N++
Sbjct: 136 LNLMKHFSKFSLHDRVLEMFYAIQPIVREKPSLKAISTCLNLLIESNQVDLARHFLLNSK 195
Query: 187 SKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGK 246
L LRPNTCIFNILVKHHC+NGDL++AFEVVKEMK +RVSYPNL+TYSTL+GGLCE+G+
Sbjct: 196 KSLRLRPNTCIFNILVKHHCKNGDLESAFEVVKEMKKSRVSYPNLITYSTLMGGLCESGR 255
Query: 247 LKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYS 306
LKEAIE FEEMV+KD ILPD LTYNILINGFC RGKVDRAR I+EFMK+NGC+PN+FNYS
Sbjct: 256 LKEAIELFEEMVAKDQILPDVLTYNILINGFCCRGKVDRARKIMEFMKNNGCNPNLFNYS 315
Query: 307 VLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDK 366
L+NG+CKEGR QEAKEVF E++S+G+KPDTI YTTLINCLCR +++EA ELL++MK+K
Sbjct: 316 TLINGFCKEGRWQEAKEVFVEMESIGLKPDTIGYTTLINCLCRAAQIEEAMELLKEMKEK 375
Query: 367 DCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKA 426
+C+AD VT NV+LGGLCREGRF +AL M++KLP+EG YLNK SYRIVLN L QK E+ KA
Sbjct: 376 ECQADVVTLNVLLGGLCREGRFQDALQMLEKLPYEGVYLNKASYRIVLNSLCQKDEMEKA 435
Query: 427 TELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDL 486
+L+GLML+RGFVPH+ATSN LL+ LC GMV DAV +L+GL E GFKPE W L +L
Sbjct: 436 AKLVGLMLDRGFVPHYATSNDLLIRLCKAGMVDDAVTALVGLAETGFKPEPHCWEFLTEL 495
Query: 487 ICRERKMLPVFELLDVLVTQE 503
C+ERK+L VFELLD LV +E
Sbjct: 496 NCKERKLLSVFELLDELVIKE 514
BLAST of Csa3G890050 vs. TrEMBL
Match:
B9T1X9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0108800 PE=4 SV=1)
HSP 1 Score: 684.1 bits (1764), Expect = 1.3e-193
Identity = 332/489 (67.89%), Postives = 399/489 (81.60%), Query Frame = 1
Query: 17 WVSKTVISKSNTSIRLFAT---SKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMV 76
W+S SK+ + T S ++ K +ISHE+AI LIK E+DPQHAL+IFNMV
Sbjct: 23 WISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMV 82
Query: 77 SEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSM 136
EQ+GFNHNHATY+++I LA+ KKF A+D +LHQMTY+TCK HE IFLNLMKHF KSS+
Sbjct: 83 GEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSL 142
Query: 137 HERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIF 196
HERVL+MFYAI+ IVREKPSLKAISTCLN+LVES ++DLA+K L+ L +RPNTCIF
Sbjct: 143 HERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIF 202
Query: 197 NILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMV 256
NILVKHHC++GDL++A EV+ EMK +R SYPN++TYSTLI GLC NG+LKEAIE FEEMV
Sbjct: 203 NILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMV 262
Query: 257 SKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRL 316
SKD ILPDALTY++LI GFC GK DRAR I+EFM+SNGC PNVFNYSVLMNG+CKEGRL
Sbjct: 263 SKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRL 322
Query: 317 QEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVM 376
+EAKEVF+E+KS G+KPDT+ YTTLINC C GR+DEA ELL++M + C+AD VTFNV+
Sbjct: 323 EEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVL 382
Query: 377 LGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGF 436
L GLCREGRFDEAL M++ L +EG YLNKGSYRIVLNFL QKGEL K+ LLGLML+RGF
Sbjct: 383 LKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGF 442
Query: 437 VPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFE 496
VPH+ATSN LL+ LC GMV +AV +L GL +MGF PE +SW L++ ICRERK+L VFE
Sbjct: 443 VPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFE 502
Query: 497 LLDVLVTQE 503
L+D LV +E
Sbjct: 503 LVDELVEKE 511
BLAST of Csa3G890050 vs. TrEMBL
Match:
W9RXH4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007723 PE=4 SV=1)
HSP 1 Score: 681.8 bits (1758), Expect = 6.4e-193
Identity = 334/491 (68.02%), Postives = 404/491 (82.28%), Query Frame = 1
Query: 14 AIGWVSKTVISKSNTS-----IRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHALD 73
+I W+S +SK+++ A+S E ++K+K YISH+TAI LIK ERDPQ AL+
Sbjct: 24 SIRWISPVQLSKASSKKPDPPTESIASSLEGRRKAK--YISHDTAINLIKRERDPQRALE 83
Query: 74 IFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHF 133
IFN VSEQ+GFNHN TY++I+ LA KKF AID +L QM Y+TCK HE IFLNLMKHF
Sbjct: 84 IFNSVSEQKGFNHNGDTYSTILHKLALSKKFGAIDAILRQMMYETCKFHEPIFLNLMKHF 143
Query: 134 SKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRP 193
SK ++HE+VL+MF+AI+SI REKPSLKAISTCLNLLVE++R+DLAR+ L+++R L+L+P
Sbjct: 144 SKYALHEKVLEMFHAIRSIAREKPSLKAISTCLNLLVEANRIDLARQFLMHSRKNLSLKP 203
Query: 194 NTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEF 253
NTCIFNILVKHHCRNGDL++AFEVVKEMK A++SYPNL+TYSTLI GLC +G+LK AIE
Sbjct: 204 NTCIFNILVKHHCRNGDLESAFEVVKEMKKAKISYPNLITYSTLIDGLCVSGRLKGAIEL 263
Query: 254 FEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYC 313
FEEM+SKD ILPDALT+N+LINGFC+ GKVDRAR I+EFMKSNGCSPNVFNYS L+NG+
Sbjct: 264 FEEMISKDQILPDALTFNVLINGFCRDGKVDRARKIMEFMKSNGCSPNVFNYSALINGFF 323
Query: 314 KEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTV 373
K GR +EA+E+F E+KS G KPD + YTT+INC CRTGR DEA ELL++MK +CRAD V
Sbjct: 324 KVGRFEEAEEIFYEMKSFGPKPDKVGYTTIINCFCRTGRTDEAMELLKEMKGGECRADVV 383
Query: 374 TFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLM 433
TFNV+ GGLCREGR +EAL M+++LP+EG +LNK SYRIVLNFL QKGEL+KAT LL LM
Sbjct: 384 TFNVIFGGLCREGRLEEALRMLERLPYEGMHLNKASYRIVLNFLCQKGELKKATSLLDLM 443
Query: 434 LNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKM 493
L RGFVPH ATSN LL+ LCN GM DA +L GLLEMGFKPE +SW LVDLI RERK+
Sbjct: 444 LGRGFVPHFATSNELLVRLCNAGMADDAAMALFGLLEMGFKPEPDSWAILVDLISRERKL 503
Query: 494 LPVFELLDVLV 500
L F+LLD L+
Sbjct: 504 LSSFQLLDELI 512
BLAST of Csa3G890050 vs. TAIR10
Match:
AT5G18475.1 (AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 561.2 bits (1445), Expect = 6.4e-160
Identity = 267/494 (54.05%), Postives = 362/494 (73.28%), Query Frame = 1
Query: 9 RFKNLAIGWVSKTVIS--KSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHA 68
RF + + WVS S K S ++ ++ K+ +ISHE+A+ L+K ERDPQ
Sbjct: 13 RFSSSSRSWVSPICFSEKKKKPSPPPESSISPVETNPKTKFISHESAVSLMKRERDPQGV 72
Query: 69 LDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMK 128
LDIFN S+Q+GFNHN+ATY+ ++ NL ++KKF A+D +LHQM Y+TC+ E +FLNLM+
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 129 HFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNL 188
HFS+S +H++V++MF I+ I R KPSL AISTCLNLL++S V+L+RKLL+ A+ L L
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 189 RPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAI 248
+PNTCIFNILVKHHC+NGD+ AF VV+EMK + +SYPN +TYSTL+ L + + KEA+
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 249 EFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNG 308
E FE+M+SK+ I PD +T+N++INGFC+ G+V+RA+ IL+FMK NGC+PNV+NYS LMNG
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 309 YCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRAD 368
+CK G++QEAK+ F+E+K G+K DT+ YTTL+NC CR G DEA +LL +MK CRAD
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 369 TVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLG 428
T+T+NV+L GL EGR +EAL M+ + EG +LNKGSYRI+LN L GEL KA + L
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 429 LMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRER 488
+M RG PHHAT N L++ LC +G + V L+G L +G P +SW +V+ IC+ER
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 492
Query: 489 KMLPVFELLDVLVT 501
K++ VFELLD LV+
Sbjct: 493 KLVHVFELLDSLVS 506
BLAST of Csa3G890050 vs. TAIR10
Match:
AT5G46100.1 (AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 219.9 bits (559), Expect = 3.5e-57
Identity = 144/459 (31.37%), Postives = 231/459 (50.33%), Query Frame = 1
Query: 45 SSYISHETAIKLIKNERDPQHALDIFNMVSEQ--QGFNHNHATYASIIQNLAKYKKFQAI 104
S I+ IKL++ E+D + ++ +F+ + + G+ H+ +++ ++ L KF+A
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA 70
Query: 105 DGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLN 164
+ ++ +M + C V E I L++ + + + L +F+ +K + PS KA T L
Sbjct: 71 EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCD-PSQKAYVTVLA 130
Query: 165 LLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRN-GDLQAAFEVVKEMKSARV 224
+LVE ++++LA K N R ++ L P N+L+K CRN G + A ++ EM R
Sbjct: 131 ILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK-RG 190
Query: 225 SYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRA 284
P+ TY TLI GLC G++ EA + F EMV KD P +TY LING C VD A
Sbjct: 191 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEA 250
Query: 285 RTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINC 344
LE MKS G PNVF YS LM+G CK+GR +A E+F + + G +P+ ++YTTLI
Sbjct: 251 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 310
Query: 345 LCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLN 404
LC+ ++ EA ELL +M + + D + ++ G C +F EA + + ++ G N
Sbjct: 311 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 370
Query: 405 KGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLL 464
+ ++ I H TSN ++ LC N A L
Sbjct: 371 RLTWNI----------------------------HVKTSNEVVRGLCAN-YPSRAFTLYL 430
Query: 465 GLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVT 501
+ G E E+ +LV +C++ + +L+D +VT
Sbjct: 431 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
HSP 2 Score: 116.3 bits (290), Expect = 5.4e-26
Identity = 71/281 (25.27%), Postives = 139/281 (49.47%), Query Frame = 1
Query: 152 PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFE 211
P T ++ L R+D A+KL K + P + L+ C + ++ A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLINGLCGSKNVDEAMR 249
Query: 212 VVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271
++EMKS + PN+ TYS+L+ GLC++G+ +A+E FE M+++ P+ +TY LI G
Sbjct: 250 YLEEMKSKGIE-PNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRPNMVTYTTLITG 309
Query: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPD 331
C+ K+ A +L+ M G P+ Y +++G+C + +EA +E+ G+ P+
Sbjct: 310 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 369
Query: 332 TISY-------TTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFD 391
+++ ++ LC A L M+ + + T ++ LC++G F
Sbjct: 370 RLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ 429
Query: 392 EALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELL 426
+A+ +V ++ +G +KG++++++ K + +A++ L
Sbjct: 430 KAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
HSP 3 Score: 79.7 bits (195), Expect = 5.6e-15
Identity = 77/314 (24.52%), Postives = 135/314 (42.99%), Query Frame = 1
Query: 56 LIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCK 115
L +N+ L IF + ++G + + TY ++I L ++ + + +M C
Sbjct: 166 LCRNDGTVDAGLKIF-LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 225
Query: 116 VHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARK 175
+ +L+ S + + +KS E P++ S+ ++ L + R A +
Sbjct: 226 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE-PNVFTYSSLMDGLCKDGRSLQAME 285
Query: 176 LLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGG 235
L ++ RPN + L+ C+ +Q A E++ M + P+ Y +I G
Sbjct: 286 LFEMMMAR-GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK-PDAGLYGKVISG 345
Query: 236 LCENGKLKEAIEFFEEMVSKDNILPDALTYNI-------LINGFCQRGKVDRARTILEFM 295
C K +EA F +EM+ I P+ LT+NI ++ G C RA T+ M
Sbjct: 346 FCAISKFREAANFLDEMI-LGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSM 405
Query: 296 KSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRV 355
+S G S V L+ CK+G Q+A ++ +EI + G P ++ LI V
Sbjct: 406 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 465
Query: 356 DEATELLQQMKDKD 363
EA++ L ++D D
Sbjct: 466 GEASDTL--LRDLD 471
BLAST of Csa3G890050 vs. TAIR10
Match:
AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 213.8 bits (543), Expect = 2.5e-55
Identity = 111/309 (35.92%), Postives = 182/309 (58.90%), Query Frame = 1
Query: 188 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIE 247
P+ +N+++ +C+ G++ A V+ M + P++VTY+T++ LC++GKLK+A+E
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAME 229
Query: 248 FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGY 307
+ M+ +D PD +TY ILI C+ V A +L+ M+ GC+P+V Y+VL+NG
Sbjct: 230 VLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 289
Query: 308 CKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADT 367
CKEGRL EA + N++ S G +P+ I++ ++ +C TGR +A +LL M K
Sbjct: 290 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 349
Query: 368 VTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGL 427
VTFN+++ LCR+G A+D+++K+P G N SY +L+ ++ ++ +A E L
Sbjct: 350 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 409
Query: 428 MLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERK 487
M++RG P T NT+L LC +G V+DAVE L L G P ++ T++D + + K
Sbjct: 410 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 469
Query: 488 MLPVFELLD 497
+LLD
Sbjct: 470 TGKAIKLLD 473
HSP 2 Score: 190.7 bits (483), Expect = 2.3e-48
Identity = 99/300 (33.00%), Postives = 169/300 (56.33%), Query Frame = 1
Query: 202 RNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPD 261
R G+L+ F+ ++ M + P+++ +TLI G C GK ++A + E ++ +PD
Sbjct: 114 RTGELEEGFKFLENMVY-HGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPD 173
Query: 262 ALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFN 321
+TYN++I+G+C+ G+++ A ++L+ M SP+V Y+ ++ C G+L++A EV +
Sbjct: 174 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 233
Query: 322 EIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREG 381
+ PD I+YT LI CR V A +LL +M+D+ C D VT+NV++ G+C+EG
Sbjct: 234 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 293
Query: 382 RFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSN 441
R DEA+ + +P G N ++ I+L + G A +LL ML +GF P T N
Sbjct: 294 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 353
Query: 442 TLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQ 501
L+ LC G++ A++ L + + G +P S+ L+ C+E+KM E L+ +V++
Sbjct: 354 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
HSP 3 Score: 186.0 bits (471), Expect = 5.6e-47
Identity = 118/400 (29.50%), Postives = 210/400 (52.50%), Query Frame = 1
Query: 73 VSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSS 132
V ++ + + TY +I+++L K + VL +M C + L++ + S
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 133 MHERVLDMFYAIKSI--VREK---PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLR 192
+ +A+K + +R++ P + + +N + + R+D A K L N +
Sbjct: 254 ------GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL-NDMPSSGCQ 313
Query: 193 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIE 252
PN NI+++ C G A +++ +M S P++VT++ LI LC G L AI+
Sbjct: 314 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAID 373
Query: 253 FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGY 312
E+M + P++L+YN L++GFC+ K+DRA LE M S GC P++ Y+ ++
Sbjct: 374 ILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 433
Query: 313 CKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADT 372
CK+G++++A E+ N++ S G P I+Y T+I+ L + G+ +A +LL +M+ KD + DT
Sbjct: 434 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 493
Query: 373 VTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGL 432
+T++ ++GGL REG+ DEA+ + G N ++ ++ L + + +A + L
Sbjct: 494 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 553
Query: 433 MLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMG 468
M+NRG P+ + L+ L GM K+A+E L L G
Sbjct: 554 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
HSP 4 Score: 174.1 bits (440), Expect = 2.2e-43
Identity = 91/338 (26.92%), Postives = 182/338 (53.85%), Query Frame = 1
Query: 161 LNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSAR 220
L +V + ++ K L N N+ P+ L++ CR G + A ++++ ++ +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 168
Query: 221 VSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDR 280
+ P+++TY+ +I G C+ G++ A+ + M ++ PD +TYN ++ C GK+ +
Sbjct: 169 -AVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQ 228
Query: 281 ARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLIN 340
A +L+ M C P+V Y++L+ C++ + A ++ +E++ G PD ++Y L+N
Sbjct: 229 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 288
Query: 341 CLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYL 400
+C+ GR+DEA + L M C+ + +T N++L +C GR+ +A ++ + +GF
Sbjct: 289 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 348
Query: 401 NKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESL 460
+ ++ I++NFL +KG L +A ++L M G P+ + N LL C + A+E L
Sbjct: 349 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 408
Query: 461 LGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVL 499
++ G P+ ++ T++ +C++ K+ E+L+ L
Sbjct: 409 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
BLAST of Csa3G890050 vs. TAIR10
Match:
AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 209.1 bits (531), Expect = 6.1e-54
Identity = 131/455 (28.79%), Postives = 233/455 (51.21%), Query Frame = 1
Query: 50 HETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQM 109
H TA+ IK ++DP AL++FN + ++ GF H +TY S+I+ L Y KF+A++ VL M
Sbjct: 9 HVTAV--IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 68
Query: 110 TYDTCK-VHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESD 169
+ + EG+++ MK++ + + +++F + E P++ + + +++LV+S
Sbjct: 69 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE-PTVFSYNAIMSVLVDSG 128
Query: 170 RVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVT 229
D A K+ + R + + P+ F I +K C+ AA ++ M S N+V
Sbjct: 129 YFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM-NVVA 188
Query: 230 YSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFM 289
Y T++GG E E E F +M++ L + T+N L+ C++G V +L+ +
Sbjct: 189 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS-TFNKLLRVLCKKGDVKECEKLLDKV 248
Query: 290 KSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRV 349
G PN+F Y++ + G C+ G L A + + G KPD I+Y LI LC+ +
Sbjct: 249 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 308
Query: 350 DEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIV 409
EA L +M ++ D+ T+N ++ G C+ G A +V F GF ++ +YR +
Sbjct: 309 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 368
Query: 410 LNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGF 469
++ L +GE +A L L +G P+ NTL+ L N GM+ +A + + E G
Sbjct: 369 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 428
Query: 470 KPEHESWFTLVDLICRERKMLPVFELLDVLVTQEY 504
PE +++ LV+ +C+ + L+ V++++ Y
Sbjct: 429 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
HSP 2 Score: 178.7 bits (452), Expect = 8.9e-45
Identity = 108/343 (31.49%), Postives = 183/343 (53.35%), Query Frame = 1
Query: 154 LKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVV 213
L + L +L + V KLL K + PN +N+ ++ C+ G+L A +V
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKV-IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 275
Query: 214 KEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFC 273
+ P+++TY+ LI GLC+N K +EA + +MV+ + + PD+ TYN LI G+C
Sbjct: 276 GCLIEQGPK-PDVITYNNLIYGLCKNSKFQEAEVYLGKMVN-EGLEPDSYTYNTLIAGYC 335
Query: 274 QRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTI 333
+ G V A I+ NG P+ F Y L++G C EG A +FNE G+KP+ I
Sbjct: 336 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 395
Query: 334 SYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKL 393
Y TLI L G + EA +L +M +K + TFN+++ GLC+ G +A +V+ +
Sbjct: 396 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 455
Query: 394 PFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMV 453
+G++ + ++ I+++ + + ++ A E+L +ML+ G P T N+LL LC
Sbjct: 456 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 515
Query: 454 KDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLD 497
+D +E+ ++E G P ++ L++ +CR RK+ LL+
Sbjct: 516 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
HSP 3 Score: 142.1 bits (357), Expect = 9.2e-34
Identity = 108/437 (24.71%), Postives = 203/437 (46.45%), Query Frame = 1
Query: 39 IQKKSKSSYISHETAIK-LIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYK 98
I++ K I++ I L KN + + + + MV+E G + TY ++I K
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE--GLEPDSYTYNTLIAGYCKGG 337
Query: 99 KFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAI--KSIVREKPSLK 158
Q + ++ ++ + + +L+ R L +F K I KP++
Sbjct: 338 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI---KPNVI 397
Query: 159 AISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKE 218
+T + L + L L N S+ L P FNILV C+ G + A +VK
Sbjct: 398 LYNTLIKGLSNQGMI-LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 457
Query: 219 MKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQR 278
M S + +P++ T++ LI G K++ A+E + M+ + + PD TYN L+NG C+
Sbjct: 458 MIS-KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD-NGVDPDVYTYNSLLNGLCKT 517
Query: 279 GKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISY 338
K + + M GC+PN+F +++L+ C+ +L EA + E+K+ + PD +++
Sbjct: 518 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 577
Query: 339 TTLINCLCRTGRVDEATELLQQMKDK-DCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 398
TLI+ C+ G +D A L ++M++ + T T+N+++ + A + Q++
Sbjct: 578 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 637
Query: 399 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVK 458
+ +YR++++ + G + + L M+ GF+P T ++ LC V
Sbjct: 638 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 697
Query: 459 DAVESLLGLLEMGFKPE 472
+A + +++ G PE
Sbjct: 698 EAAGIIHRMVQKGLVPE 706
HSP 4 Score: 92.4 bits (228), Expect = 8.4e-19
Identity = 64/245 (26.12%), Postives = 118/245 (48.16%), Query Frame = 1
Query: 123 NLMKHFSKSSMHERVLDMFYAIKSIVRE--KPSLKAISTCLNLLVESDRVDLARKLLVNA 182
+L+ K+S E V++ + K++V + P+L + L L ++D A LL
Sbjct: 501 SLLNGLCKTSKFEDVMETY---KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 560
Query: 183 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 242
++K ++ P+ F L+ C+NGDL A+ + ++M+ A + TY+ +I E
Sbjct: 561 KNK-SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 620
Query: 243 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 302
+ A + F+EMV + + PD TY ++++GFC+ G V+ L M NG P++
Sbjct: 621 NVTMAEKLFQEMVDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 680
Query: 303 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATE--LLQQM 362
++N C E R+ EA + + + G+ P+ +N +C + + A +L+ +
Sbjct: 681 GRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDL 734
Query: 363 KDKDC 364
K C
Sbjct: 741 LKKSC 734
BLAST of Csa3G890050 vs. TAIR10
Match:
AT3G09060.1 (AT3G09060.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 207.6 bits (527), Expect = 1.8e-53
Identity = 117/442 (26.47%), Postives = 239/442 (54.07%), Query Frame = 1
Query: 48 ISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLH 107
+S + +KL+K+E++P+ A +F+ + G+ H+ Y I++ L++ + + ++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 108 QMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVES 167
+ CK E + L+++K + K+SM ++ LD+F ++ I +P++++ +T LN VE+
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
Query: 168 DRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLV 227
+ L + + PN +N+L+K C+ + + A + M P++
Sbjct: 128 KQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK-PDVF 187
Query: 228 TYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILE- 287
+YST+I L + GKL +A+E F+EM S+ + PD YNILI+GF + A + +
Sbjct: 188 SYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 247
Query: 288 FMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTG 347
++ + PNV ++++++G K GR+ + +++ +K + D +Y++LI+ LC G
Sbjct: 248 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 307
Query: 348 RVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYR 407
VD+A + ++ ++ D VT+N MLGG CR G+ E+L++ + + + +N SY
Sbjct: 308 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 367
Query: 408 IVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEM 467
I++ L + G++ +AT + LM +G+ T + LC NG V A+ + +
Sbjct: 368 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 427
Query: 468 GFKPEHESWFTLVDLICRERKM 489
G + ++ +++D +C+++++
Sbjct: 428 GGHLDVYAYASIIDCLCKKKRL 445
HSP 2 Score: 161.4 bits (407), Expect = 1.5e-39
Identity = 121/491 (24.64%), Postives = 237/491 (48.27%), Query Frame = 1
Query: 10 FKNLAIGWVSKTVISKSNTSIRLFATSKE-IQKKSKSSYI----------SHETAIKLIK 69
FK + + + I NT + F +K+ ++ +S +Y ++ IK+
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160
Query: 70 NERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHE 129
+++ + A + + ++ GF + +Y+++I +LAK K + +M+
Sbjct: 161 KKKEFEKARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 220
Query: 130 GIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLV 189
+ L+ F K H+ ++++ + P++K + ++ L + RVD K+
Sbjct: 221 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW- 280
Query: 190 NARSKLNLRPNTCI-FNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLC 249
R K N R ++ L+ C G++ A V E+ + S ++VTY+T++GG C
Sbjct: 281 -ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI-DVVTYNTMLGGFC 340
Query: 250 ENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNV 309
GK+KE++E + M K+++ + ++YNILI G + GK+D A I M + G + +
Sbjct: 341 RCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 400
Query: 310 FNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQ 369
Y + ++G C G + +A V E++S G D +Y ++I+CLC+ R++EA+ L+++
Sbjct: 401 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 460
Query: 370 MKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGE 429
M ++ N ++GGL R+ R EA ++++ G SY I++ L + G+
Sbjct: 461 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 520
Query: 430 LRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFT 489
+A+ + ML G+ P T + LL LC + + A+E L+ G + +
Sbjct: 521 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 580
HSP 3 Score: 139.8 bits (351), Expect = 4.6e-33
Identity = 101/397 (25.44%), Postives = 182/397 (45.84%), Query Frame = 1
Query: 85 TYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAI 144
TY+S+I L + V +++ + + ++ F + + L+++
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW--- 351
Query: 145 KSIVREKPSLKAISTCLNL--LVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCR 204
I+ K S+ +S + + L+E+ ++D A + +K T + I + C
Sbjct: 352 -RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT-YGIFIHGLCV 411
Query: 205 NGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDA 264
NG + A V++E++S+ + ++ Y+++I LC+ +L+EA +EM SK + ++
Sbjct: 412 NGYVNKALGVMQEVESSG-GHLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNS 471
Query: 265 LTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNE 324
N LI G + ++ A L M NGC P V +Y++L+ G CK G+ EA E
Sbjct: 472 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 531
Query: 325 IKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGR 384
+ G KPD +Y+ L+ LCR ++D A EL Q D + N+++ GLC G+
Sbjct: 532 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 591
Query: 385 FDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNT 444
D+A+ ++ + N +Y ++ + G+ +AT + G M G P + NT
Sbjct: 592 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 651
Query: 445 LLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLV 480
++ LC V A+E G P +W LV
Sbjct: 652 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
HSP 4 Score: 109.4 bits (272), Expect = 6.6e-24
Identity = 81/338 (23.96%), Postives = 149/338 (44.08%), Query Frame = 1
Query: 39 IQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKK 98
++ K+ + +S+ IK + A I+ ++ + G+ + TY I L
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCVNGY 410
Query: 99 FQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKA-- 158
GV+ ++ + + +++ K E ++ +K + + L +
Sbjct: 411 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL---VKEMSKHGVELNSHV 470
Query: 159 ISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEM 218
+ + L+ R+ A + K RP +NIL+ C+ G A VKEM
Sbjct: 471 CNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 530
Query: 219 KSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRG 278
P+L TYS L+ GLC + K+ A+E + + + + + D + +NILI+G C G
Sbjct: 531 LENGWK-PDLKTYSILLCGLCRDRKIDLALELWHQFL-QSGLETDVMMHNILIHGLCSVG 590
Query: 279 KVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYT 338
K+D A T++ M+ C+ N+ Y+ LM G+ K G A ++ + +G++PD ISY
Sbjct: 591 KLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 650
Query: 339 TLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 375
T++ LC V A E ++ T+N+++
Sbjct: 651 TIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
BLAST of Csa3G890050 vs. NCBI nr
Match:
gi|449436958|ref|XP_004136259.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Cucumis sativus])
HSP 1 Score: 1005.4 bits (2598), Expect = 3.6e-290
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1
Query: 1 MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE 60
MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE
Sbjct: 1 MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE 60
Query: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI
Sbjct: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
Query: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA
Sbjct: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
Query: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG
Sbjct: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
Query: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY
Sbjct: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
Query: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD
Sbjct: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
Query: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK
Sbjct: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
Query: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD
Sbjct: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
Query: 481 LICRERKMLPVFELLDVLVTQEYL 505
LICRERKMLPVFELLDVLVTQEYL
Sbjct: 481 LICRERKMLPVFELLDVLVTQEYL 504
BLAST of Csa3G890050 vs. NCBI nr
Match:
gi|659132396|ref|XP_008466175.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Cucumis melo])
HSP 1 Score: 963.4 bits (2489), Expect = 1.6e-277
Identity = 483/504 (95.83%), Postives = 492/504 (97.62%), Query Frame = 1
Query: 1 MNIAIFSSRFKNLAIGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNE 60
MN+AIFSSRFKNLAIGWVSKT SKSNTSIRLFATSKEIQKKSKSSY+SHETAIKLIKNE
Sbjct: 1 MNLAIFSSRFKNLAIGWVSKT-FSKSNTSIRLFATSKEIQKKSKSSYVSHETAIKLIKNE 60
Query: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI 120
RDPQHALDIFNMVSEQQGFNHNHATYASIIQ LAK KKFQAIDGVLHQMTYDTCKVHEGI
Sbjct: 61 RDPQHALDIFNMVSEQQGFNHNHATYASIIQKLAKSKKFQAIDGVLHQMTYDTCKVHEGI 120
Query: 121 FLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNA 180
FLNLMKHFS SSMHERVLDMFYAIKSIVREKPSLKA STCLNLLVESDRVDLARKLLVNA
Sbjct: 121 FLNLMKHFSVSSMHERVLDMFYAIKSIVREKPSLKAFSTCLNLLVESDRVDLARKLLVNA 180
Query: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG
Sbjct: 181 RSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENG 240
Query: 241 KLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNY 300
KLKEAIEFFEEMVSKD ILPDALTYNILINGFCQ GKVDRAR I+EFMKSNGC PNVFNY
Sbjct: 241 KLKEAIEFFEEMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCIPNVFNY 300
Query: 301 SVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
S LMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD
Sbjct: 301 SALMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
Query: 361 KDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRK 420
KDCRADTVTFNVMLGGLCREGRF+EALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELR+
Sbjct: 361 KDCRADTVTFNVMLGGLCREGRFEEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRR 420
Query: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLV+
Sbjct: 421 ATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVN 480
Query: 481 LICRERKMLPVFELLDVLVTQEYL 505
LICRERKMLP+FELLD LVT++YL
Sbjct: 481 LICRERKMLPMFELLDELVTEKYL 503
BLAST of Csa3G890050 vs. NCBI nr
Match:
gi|645225030|ref|XP_008219391.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Prunus mume])
HSP 1 Score: 706.4 bits (1822), Expect = 3.5e-200
Identity = 337/492 (68.50%), Postives = 415/492 (84.35%), Query Frame = 1
Query: 14 AIGWVSKTVISKSNT---SIRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIF 73
++ W+S +K NT T+ + + + K+ YISHE+ I LIK ERDPQHAL+IF
Sbjct: 24 SLPWISPLQFTKVNTHKPDPPPETTTTQTETRRKTKYISHESTINLIKRERDPQHALEIF 83
Query: 74 NMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSK 133
NMVSEQ+GFNHN+ATYA+I+Q LA+ KKF+AID +LHQMTY+TCK HEGIFLNLMKHFSK
Sbjct: 84 NMVSEQKGFNHNNATYATILQKLAQSKKFKAIDAILHQMTYETCKFHEGIFLNLMKHFSK 143
Query: 134 SSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNT 193
SSMHERVL+MFYAI+ +VREKPSLK ISTCLNLL+ES++VDLA++ L++ + LN +PNT
Sbjct: 144 SSMHERVLEMFYAIQPVVREKPSLKCISTCLNLLIESNQVDLAQQFLMHLKKNLNFKPNT 203
Query: 194 CIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFE 253
CI NILVKHHC+NGDL++AFEVVKEMK +++SYPNLVTYSTL+GGLC++ +L EA+E FE
Sbjct: 204 CIVNILVKHHCKNGDLESAFEVVKEMKKSKISYPNLVTYSTLLGGLCKSDRLTEAMELFE 263
Query: 254 EMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKE 313
EM+SKD ILPDALTYN+LINGFC GKVDRAR ILEFMKSNGC PNVFNY+ LMNG+CKE
Sbjct: 264 EMISKDQILPDALTYNVLINGFCHGGKVDRARKILEFMKSNGCQPNVFNYTALMNGFCKE 323
Query: 314 GRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTF 373
RLQEAKE+F+E+ S G+KPDT+ YT LINC CRTG+++EA ELL++MK+++C+ADTVTF
Sbjct: 324 KRLQEAKEIFHEMTSFGIKPDTVGYTALINCCCRTGKMNEAIELLKEMKERECKADTVTF 383
Query: 374 NVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLN 433
NV+LGGLCREGR ++AL+M++KLP+EG YLNK SYRIVLNFL QKGEL KAT+LLGLM+
Sbjct: 384 NVILGGLCREGRIEDALEMLEKLPYEGVYLNKASYRIVLNFLCQKGELNKATQLLGLMMG 443
Query: 434 RGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLP 493
RGFVPH+ATSN LL+ L GM ++AV +L L EMGFKP+ +SW LV+ ICRERK+L
Sbjct: 444 RGFVPHYATSNDLLVRLSEAGMAENAVMALSRLAEMGFKPQPDSWALLVESICRERKLLS 503
Query: 494 VFELLDVLVTQE 503
FELLD LV E
Sbjct: 504 AFELLDELVVIE 515
BLAST of Csa3G890050 vs. NCBI nr
Match:
gi|1009165324|ref|XP_015900972.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Ziziphus jujuba])
HSP 1 Score: 701.4 bits (1809), Expect = 1.1e-198
Identity = 335/469 (71.43%), Postives = 401/469 (85.50%), Query Frame = 1
Query: 35 TSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLA 94
T+ ++ + ++ YISHETAI LIK E+DPQHAL+IFNMVSEQ+GF+HN+ATYA+I+Q LA
Sbjct: 48 TNIVVEPQRRAKYISHETAINLIKREKDPQHALEIFNMVSEQRGFSHNNATYATILQKLA 107
Query: 95 KYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSL 154
KKFQAID +LHQMTY+TCK HE I +NLMKHFSKS+MHE+VL+MFYAI+ I REKPSL
Sbjct: 108 LSKKFQAIDAILHQMTYETCKFHEDILVNLMKHFSKSTMHEKVLEMFYAIQPIAREKPSL 167
Query: 155 KAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVK 214
KAISTCLNLLVES +VDLAR+ L++++ KLNL+PNTCIFNILVK+HC+NGDL++AFEVVK
Sbjct: 168 KAISTCLNLLVESSQVDLARRFLMHSKKKLNLKPNTCIFNILVKYHCKNGDLESAFEVVK 227
Query: 215 EMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQ 274
EMK +++SYPNL+TYSTL+ GLCENGKLKEAIE FEEM+S D ILPDALTYN LINGFC+
Sbjct: 228 EMKKSKISYPNLITYSTLMDGLCENGKLKEAIELFEEMISGDQILPDALTYNTLINGFCR 287
Query: 275 RGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTIS 334
GK D+AR I+EFMKS GC+PNVFNYS LMNG+ KEGR QEAKEVF+E+KS G+K DT+
Sbjct: 288 EGKADKARKIMEFMKSKGCNPNVFNYSALMNGFSKEGRFQEAKEVFDEMKSYGLKADTVG 347
Query: 335 YTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 394
YTTLI+C C+ GRVDEA ELL++MK+K C+AD VTFNV+LGGLCR GRF+EAL M++K P
Sbjct: 348 YTTLISCFCKAGRVDEAIELLKEMKEKGCKADFVTFNVILGGLCRVGRFEEALLMLEKFP 407
Query: 395 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVK 454
+EG LNK SYRIVLN L +KGEL+KA +LLGLML RGFVPH ATSN LL+ LCN GMV
Sbjct: 408 YEGINLNKASYRIVLNLLCKKGELKKAIDLLGLMLGRGFVPHFATSNELLVSLCNAGMVD 467
Query: 455 DAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQEY 504
DA +L GLLEMGFKPE SW L++ ICRERK+LP FELLD L Q +
Sbjct: 468 DAAMALFGLLEMGFKPETSSWALLIESICRERKLLPAFELLDELAMQSH 516
BLAST of Csa3G890050 vs. NCBI nr
Match:
gi|1009165322|ref|XP_015900970.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Ziziphus jujuba])
HSP 1 Score: 701.4 bits (1809), Expect = 1.1e-198
Identity = 335/469 (71.43%), Postives = 401/469 (85.50%), Query Frame = 1
Query: 35 TSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLA 94
T+ ++ + ++ YISHETAI LIK E+DPQHAL+IFNMVSEQ+GF+HN+ATYA+I+Q LA
Sbjct: 73 TNIVVEPQRRAKYISHETAINLIKREKDPQHALEIFNMVSEQRGFSHNNATYATILQKLA 132
Query: 95 KYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSL 154
KKFQAID +LHQMTY+TCK HE I +NLMKHFSKS+MHE+VL+MFYAI+ I REKPSL
Sbjct: 133 LSKKFQAIDAILHQMTYETCKFHEDILVNLMKHFSKSTMHEKVLEMFYAIQPIAREKPSL 192
Query: 155 KAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVK 214
KAISTCLNLLVES +VDLAR+ L++++ KLNL+PNTCIFNILVK+HC+NGDL++AFEVVK
Sbjct: 193 KAISTCLNLLVESSQVDLARRFLMHSKKKLNLKPNTCIFNILVKYHCKNGDLESAFEVVK 252
Query: 215 EMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQ 274
EMK +++SYPNL+TYSTL+ GLCENGKLKEAIE FEEM+S D ILPDALTYN LINGFC+
Sbjct: 253 EMKKSKISYPNLITYSTLMDGLCENGKLKEAIELFEEMISGDQILPDALTYNTLINGFCR 312
Query: 275 RGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTIS 334
GK D+AR I+EFMKS GC+PNVFNYS LMNG+ KEGR QEAKEVF+E+KS G+K DT+
Sbjct: 313 EGKADKARKIMEFMKSKGCNPNVFNYSALMNGFSKEGRFQEAKEVFDEMKSYGLKADTVG 372
Query: 335 YTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 394
YTTLI+C C+ GRVDEA ELL++MK+K C+AD VTFNV+LGGLCR GRF+EAL M++K P
Sbjct: 373 YTTLISCFCKAGRVDEAIELLKEMKEKGCKADFVTFNVILGGLCRVGRFEEALLMLEKFP 432
Query: 395 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVK 454
+EG LNK SYRIVLN L +KGEL+KA +LLGLML RGFVPH ATSN LL+ LCN GMV
Sbjct: 433 YEGINLNKASYRIVLNLLCKKGELKKAIDLLGLMLGRGFVPHFATSNELLVSLCNAGMVD 492
Query: 455 DAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQEY 504
DA +L GLLEMGFKPE SW L++ ICRERK+LP FELLD L Q +
Sbjct: 493 DAAMALFGLLEMGFKPETSSWALLIESICRERKLLPAFELLDELAMQSH 541
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP392_ARATH | 1.1e-158 | 54.05 | Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN... | [more] |
| PP418_ARATH | 6.2e-56 | 31.37 | Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN... | [more] |
| PPR28_ARATH | 4.4e-54 | 35.92 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... | [more] |
| PP120_ARATH | 1.1e-52 | 28.79 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
| PP221_ARATH | 3.2e-52 | 26.47 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LGW7_CUCSA | 2.5e-290 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G890050 PE=4 SV=1 | [more] |
| F6H114_VITVI | 2.3e-198 | 72.49 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07250 PE=4 SV=... | [more] |
| A0A061GZH5_THECC | 6.6e-198 | 67.86 | Pentatricopeptide repeat superfamily protein isoform 1 OS=Theobroma cacao GN=TCM... | [more] |
| B9T1X9_RICCO | 1.3e-193 | 67.89 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| W9RXH4_9ROSA | 6.4e-193 | 68.02 | Uncharacterized protein OS=Morus notabilis GN=L484_007723 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G18475.1 | 6.4e-160 | 54.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G46100.1 | 3.5e-57 | 31.37 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G09900.1 | 2.5e-55 | 35.92 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G74580.1 | 6.1e-54 | 28.79 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G09060.1 | 1.8e-53 | 26.47 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
