Csa3G873790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G873790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 36541920 .. 36542183 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTGCAAAAGATTTAGAAAAATGTGGTGAAAAGCAATTCAAATTACAACTTGTTAATTCATTCAGATTAGACGCCTATTCCTCGATACTTAAACGCCCTTCCTCTCTTTCCCGCCCTTTTGTAAGAGCAGAGTTTTTCTCTTTGTGGATCTCAAAGGATGGTAGGGATCAGGAGGTAGCTCAGCAGTTTCACGTCATCAAGCTTATGGATTATCATCAATGGGAACCTCAAGATTCTCATCCCAAACGTGAAAGGTAA

mRNA sequence

ATGAAGTTTGCAAAAGATTTAGAAAAATGTGGTGAAAAGCAATTCAAATTACAACTTGTTAATTCATTCAGATTAGACGCCTATTCCTCGATACTTAAACGCCCTTCCTCTCTTTCCCGCCCTTTTGTAAGAGCAGAGTTTTTCTCTTTGTGGATCTCAAAGGATGGTAGGGATCAGGAGGTAGCTCAGCAGTTTCACGTCATCAAGCTTATGGATTATCATCAATGGGAACCTCAAGATTCTCATCCCAAACGTGAAAGGTAA

Coding sequence (CDS)

ATGAAGTTTGCAAAAGATTTAGAAAAATGTGGTGAAAAGCAATTCAAATTACAACTTGTTAATTCATTCAGATTAGACGCCTATTCCTCGATACTTAAACGCCCTTCCTCTCTTTCCCGCCCTTTTGTAAGAGCAGAGTTTTTCTCTTTGTGGATCTCAAAGGATGGTAGGGATCAGGAGGTAGCTCAGCAGTTTCACGTCATCAAGCTTATGGATTATCATCAATGGGAACCTCAAGATTCTCATCCCAAACGTGAAAGGTAA

Protein sequence

MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQEVAQQFHVIKLMDYHQWEPQDSHPKRER*
Homology
[Close]
BLAST of Csa3G873790 vs. TrEMBL
Match: A0A0A0LDL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873790 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE 60
          MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE
Sbjct: 1  MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE 60

Query: 61 VAQQFHVIKLMDYHQWEPQDSHPKRER 88
          VAQQFHVIKLMDYHQWEPQDSHPKRER
Sbjct: 61 VAQQFHVIKLMDYHQWEPQDSHPKRER 87

[Close]
BLAST of Csa3G873790 vs. NCBI nr
Match: gi|700204917|gb|KGN60050.1| (hypothetical protein Csa_3G873790 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.2e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE 60
          MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE
Sbjct: 1  MKFAKDLEKCGEKQFKLQLVNSFRLDAYSSILKRPSSLSRPFVRAEFFSLWISKDGRDQE 60

Query: 61 VAQQFHVIKLMDYHQWEPQDSHPKRER 88
          VAQQFHVIKLMDYHQWEPQDSHPKRER
Sbjct: 61 VAQQFHVIKLMDYHQWEPQDSHPKRER 87

The following BLAST results are available for this feature:
BLAST of Csa3G873790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDL6_CUCSA3.6e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G873790 PE=4 SV=1[more]
BLAST of Csa3G873790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204917|gb|KGN60050.1|5.2e-43100.00hypothetical protein Csa_3G873790 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G873790.1Csa3G873790.1mRNA