Csa3G825050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G825050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSa-RNase; contains IPR001568 (Ribonuclease T2-like)
LocationChr3 : 32700247 .. 32701352 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAACAAAGAGTGTCGATGTTGTGTTCTTCGTGTTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATGATTTTTGGTTTGTTCAGCAATGGCCACCAGCTGTTTGTACTTTACAATCAGGACGATGTGTAGGACGAGGGACTCGATCCTTCACAATTCATGGTTTGTGGCCTCAAAAGGGAGGACGTTCTGTGACTAATTGTACTGGCAATCAATTTGATTTCACTAAGGTAAAATTCAAACATCCAAAATATATAATCTATGTTTTTTTAAGTTTAATTTTCAGTTGGTTAATGTATCATATATTATTATTATTTCTTGTTTAAGAGTTAATGGATAGTTTATGGTAGTCATTCTTTTTTGTTTTTGTATTCGTTCTTATATTTTAAAATGATATAGTTGTTTCTTATTTATCAAACTTCTAAAACATCTCTTCATCTCTTATCTAAAAACATTGACAACTAAGTTTGATTTTCTGTTTAGAAAATAAAAGTGTTAGCAAACATACTACAGTGCTTCAATTTAAAAAACCAAATGAAATATTATAAGAAATTTGAAAGGAATTATACATGATTATTAAGTATTATGTTTTGAAAATTTATTAAATAATCGGTTTTGATAGTTAAAAAAAGAAAAAGGGTTTGCAATTCTAAAGATTGAATAATGTGTGGGTGTGTTTCAGATTGCACATTTAGAAAACGATCTAAACGTAGTTTGGCCGAATGTGGTGACGGGAAACAACAAATTCTTTTGGGGTCATGAATGGAACAAACATGGGATTTGCTCAGAGAGCAAGTTTGACGAAGCGAAGTACTTCCAAACAGCGATAAACATGAGGCACGGTATCGACCTTCTTAGTGTGCTGAGAACTGGTGGAGTAGGACCAAATGGAGCCTCCAAGGCAAAGCAAAGAGTCGAAACCGCGATTTCATCCCATTTTGGAAAAGATCCAATTCTTCGATGTAAAAAAGCATCAAACGGCCAAGTCTTATTGACGGAGATTGTGATGTGCTTCGATGACGATGGTGTCACCCTTATAAACTGTAACAAAGCAAGATCCAATTGTGCTGGGAGCTTTATTTTTTAA

mRNA sequence

ATGGAAAAAACAAAGAGTGTCGATGTTGTGTTCTTCGTGTTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATGATTTTTGGTTTGTTCAGCAATGGCCACCAGCTGTTTGTACTTTACAATCAGGACGATGTGTAGGACGAGGGACTCGATCCTTCACAATTCATGGTTTGTGGCCTCAAAAGGGAGGACGTTCTGTGACTAATTGTACTGGCAATCAATTTGATTTCACTAAGATTGCACATTTAGAAAACGATCTAAACGTAGTTTGGCCGAATGTGGTGACGGGAAACAACAAATTCTTTTGGGGTCATGAATGGAACAAACATGGGATTTGCTCAGAGAGCAAGTTTGACGAAGCGAAGTACTTCCAAACAGCGATAAACATGAGGCACGGTATCGACCTTCTTAGTGTGCTGAGAACTGGTGGAGTAGGACCAAATGGAGCCTCCAAGGCAAAGCAAAGAGTCGAAACCGCGATTTCATCCCATTTTGGAAAAGATCCAATTCTTCGATGTAAAAAAGCATCAAACGGCCAAGTCTTATTGACGGAGATTGTGATGTGCTTCGATGACGATGGTGTCACCCTTATAAACTGTAACAAAGCAAGATCCAATTGTGCTGGGAGCTTTATTTTTTAA

Coding sequence (CDS)

ATGGAAAAAACAAAGAGTGTCGATGTTGTGTTCTTCGTGTTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATGATTTTTGGTTTGTTCAGCAATGGCCACCAGCTGTTTGTACTTTACAATCAGGACGATGTGTAGGACGAGGGACTCGATCCTTCACAATTCATGGTTTGTGGCCTCAAAAGGGAGGACGTTCTGTGACTAATTGTACTGGCAATCAATTTGATTTCACTAAGATTGCACATTTAGAAAACGATCTAAACGTAGTTTGGCCGAATGTGGTGACGGGAAACAACAAATTCTTTTGGGGTCATGAATGGAACAAACATGGGATTTGCTCAGAGAGCAAGTTTGACGAAGCGAAGTACTTCCAAACAGCGATAAACATGAGGCACGGTATCGACCTTCTTAGTGTGCTGAGAACTGGTGGAGTAGGACCAAATGGAGCCTCCAAGGCAAAGCAAAGAGTCGAAACCGCGATTTCATCCCATTTTGGAAAAGATCCAATTCTTCGATGTAAAAAAGCATCAAACGGCCAAGTCTTATTGACGGAGATTGTGATGTGCTTCGATGACGATGGTGTCACCCTTATAAACTGTAACAAAGCAAGATCCAATTGTGCTGGGAGCTTTATTTTTTAA

Protein sequence

MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF*
Homology
[Close]
BLAST of Csa3G825050 vs. Swiss-Prot
Match: RNMC_MOMCH (Ribonuclease MC OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-56
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 1 

Query: 28  FDDFWFVQQWPPAVCTLQ-SGRCVGRGTRSFTIHGLWPQKGGRSVTNCT-GNQFDFTKIA 87
           FD FWFVQQWPPAVC+ Q SG C G G R+FTIHGLWPQ  G S+TNC  G+ FD TKI+
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 88  HLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHGIDLLSVLR 147
           HL++ LN +WPNV+  NN+ FW HEW KHG CSES F++A YF+ A++MR+  D++  LR
Sbjct: 61  HLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALR 120

Query: 148 TGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQV-LLTEIVMCFDDDGVTLINC 207
               GPNG +K++Q ++  + + FGK P LRC+     +V  L ++V CF  DG TLI+C
Sbjct: 121 PHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 180

Query: 208 NKARSNCAGSFIF 218
              R  C  +FIF
Sbjct: 181 --TRDTCGANFIF 191

[Close]
BLAST of Csa3G825050 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-32
Identity = 73/201 (36.32%), Postives = 105/201 (52.24%), Query Frame = 1 

Query: 16  LTILFPIV-----KSQTFDDFWFVQQWPPAVCTLQSGRCV---GRGTRSFTIHGLWPQ-K 75
           L ++ P V      S+ FD F+FVQQWP + C  Q   C    G+    F IHGLWP  K
Sbjct: 13  LLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYK 72

Query: 76  GGRSVTNCTGNQ-FDFTKIAHLENDLNVVWPNVV--TGNNKFFWGHEWNKHGICSESKFD 135
            G   +NC  ++ FD + I+ L   +   WP +   +G+ + FW HEW KHG CSES  D
Sbjct: 73  DGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVID 132

Query: 136 EAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNG 195
           + +YFQTA+N++   +LL  L   G+ P+G S + + +  +I    G  P + C +  +G
Sbjct: 133 QHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSG 192

Query: 196 QVLLTEIVMCFDDDGVTLINC 205
              L ++ +C D  G  LI C
Sbjct: 193 NSQLYQVYLCVDRSGSGLIEC 213

[Close]
BLAST of Csa3G825050 vs. Swiss-Prot
Match: RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 68/213 (31.92%), Postives = 110/213 (51.64%), Query Frame = 1 

Query: 1   MEKTKSVDVVFFVFVLTILFPIVKS-QTFDDFWFVQQWPPAVCTLQSGRC---VGRGTRS 60
           M    +  +   + ++T    ++ + + FD F+FVQQWP + C  +   C    G+    
Sbjct: 1   MASNSAFSLFLILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAAD 60

Query: 61  FTIHGLWPQKG-GRSVTNCTGNQ-FDFTKIAHLENDLNVVWPNVV--TGNNKFFWGHEWN 120
           F IHGLWP    G   +NC  N  +D ++I+ L + +   WP +   +G+   FW HEW 
Sbjct: 61  FGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWE 120

Query: 121 KHGICSESKF-DEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGK 180
           KHG C+ES   ++  YF+ A+++++ IDLLS+L+   + P+G S     +  AI S  G 
Sbjct: 121 KHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGY 180

Query: 181 DPILRCKKASNGQVLLTEIVMCFDDDGVTLINC 205
            P ++C    +G   L ++ +C D  G +LI C
Sbjct: 181 TPWIQCNVDQSGNSQLYQVYICVDGSGSSLIEC 213

[Close]
BLAST of Csa3G825050 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-28
Identity = 71/203 (34.98%), Postives = 101/203 (49.75%), Query Frame = 1 

Query: 11  FFVFVLTILFPIVKS--QTFDDFWFVQQWPPAVCTLQSGRC---VGRGTRSFTIHGLWPQ 70
           FF+F+L +    V+S  Q FD F+FV QWP A C  +   C    G+    F IHGLWP 
Sbjct: 3   FFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPN 62

Query: 71  -KGGRSVTNCT-GNQFDFTKIAHLENDLNVVWPNVVTGNNKF--FWGHEWNKHGICSESK 130
            K G    NC   ++FD  +++ L +DL   WP +   +N    FW HEW KHG C+ES+
Sbjct: 63  YKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESE 122

Query: 131 FDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKAS 190
            D+  YF+  + ++   +LL  L   G+ P+      + +E  I    G  P + C K S
Sbjct: 123 LDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDS 182

Query: 191 NGQVLLTEIVMCFDDDGVTLINC 205
           +    L +I +C D      INC
Sbjct: 183 SHNSQLYQIYLCVDTSASKFINC 205

[Close]
BLAST of Csa3G825050 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-25
Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 1 

Query: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRC---VGRGTRSF 60
           M K++   ++  + V  +L   V SQ FD F+FVQQWP + C  +   C    G+    F
Sbjct: 1   MMKSQKKLLIKIIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDF 60

Query: 61  TIHGLWPQ-KGGRSVTNC-TGNQFDFTKIAHLENDLNVVWPNVV--TGNNKFFWGHEWNK 120
           +IHGLWP  K G+   NC   +  D ++ + L + +   WP++   + +   FW HEW K
Sbjct: 61  SIHGLWPNYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLK 120

Query: 121 HGICSESKFDEAKYFQTAINMRHGIDLLSVLRTGGVGP-NGASKAKQRVETAISSHFGKD 180
           HG C  S  ++  YFQTA++ +   +LL  L   G+ P NG     + ++ AI    G  
Sbjct: 121 HGTC--SALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHT 180

Query: 181 PILRCKKASNGQVLLTEIVMCFDDDGVTLINC 205
           P + C   S G   L ++ +C D      I+C
Sbjct: 181 PFIECNVDSQGNHQLYQVYLCVDSSASKFIDC 210

[Close]
BLAST of Csa3G825050 vs. TrEMBL
Match: A0A0A0LC37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 2.9e-126
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60
           MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH
Sbjct: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60

Query: 61  GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120
           GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES
Sbjct: 61  GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120

Query: 121 KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA 180
           KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA
Sbjct: 121 KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA 180

Query: 181 SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF
Sbjct: 181 SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 217

[Close]
BLAST of Csa3G825050 vs. TrEMBL
Match: Q40115_LUFAE (Ribonuclease (RNase LC1) OS=Luffa aegyptiaca PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 151/208 (72.60%), Postives = 170/208 (81.73%), Query Frame = 1 

Query: 10  VFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGR 69
           +  VFVLTILFP+VKSQTFD FW VQ WPPAVC+ Q GRCVG+G RSFTIHG+WPQKGG 
Sbjct: 8   IVLVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHGVWPQKGGT 67

Query: 70  SVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQ 129
           SV NC G  FDFTKI+HLE+ LNV WPNV+TGNNK+FWGHEWNKHGICS SKFD+  YFQ
Sbjct: 68  SVINCPGPTFDFTKISHLESTLNVDWPNVITGNNKWFWGHEWNKHGICSVSKFDQQAYFQ 127

Query: 130 TAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTE 189
            AINMR+ IDLLS LR GGV PNG SKA+QRV++AI +  GK+P+LRC + +  Q  L E
Sbjct: 128 MAINMRNSIDLLSALRVGGVVPNGRSKARQRVQSAIRAQLGKEPVLRC-RGTGRQSRLLE 187

Query: 190 IVMCFDDDGVTLINCNKARSNCAGSFIF 218
           IVMCFDDDGVTLINCN A SNC  SFIF
Sbjct: 188 IVMCFDDDGVTLINCNPANSNCPNSFIF 214

[Close]
BLAST of Csa3G825050 vs. TrEMBL
Match: A0A0A0LHQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825060 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 9.5e-69
Identity = 122/210 (58.10%), Postives = 159/210 (75.71%), Query Frame = 1 

Query: 9   VVFFVFVLTI-LFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKG 68
           V+ FV  L+I LFPI+KSQ FD F+FVQQWPPAVC  ++G+CVG+G   FTIHG+WPQKG
Sbjct: 12  VLLFVVTLSISLFPIMKSQQFDKFYFVQQWPPAVCDGRTGKCVGKGMYYFTIHGVWPQKG 71

Query: 69  GRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKY 128
           G+SV NC G QFDF KI+ L N L+ +  +V+  +++F W HEWNKHG+CSES++   +Y
Sbjct: 72  GKSVINCPGTQFDFNKISSLANTLHQIMKDVINADDQFLWSHEWNKHGVCSESRYSMKQY 131

Query: 129 FQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLL 188
           FQ AINM++ I++LS LR GG+ PN   KAKQRVE A+ + +   P+LRCKK S+GQ LL
Sbjct: 132 FQMAINMKYKINVLSALRMGGITPNNHLKAKQRVEGAMFTAYNAYPLLRCKKDSSGQSLL 191

Query: 189 TEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           TE+VMCFD+DGVTL+NC   +SNC    +F
Sbjct: 192 TEVVMCFDNDGVTLLNCTTTKSNCDADVLF 221

[Close]
BLAST of Csa3G825050 vs. TrEMBL
Match: Q40116_LUFAE (Ribonuclease (RNase LC2) OS=Luffa aegyptiaca PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.9e-57
Identity = 113/214 (52.80%), Postives = 142/214 (66.36%), Query Frame = 1 

Query: 4   TKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLW 63
           TK + +   V +LTILF   +SQTFD F+FVQQWPP  C  Q   C      +F IHGLW
Sbjct: 3   TKVLLLATIVLLLTILFLGAESQTFDHFFFVQQWPPTTCQQQQKPCFQPPPATFKIHGLW 62

Query: 64  PQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFD 123
           PQKG  SV  C  N FD T+I+ LEN L+VVWP+VVTGNN  FW HEWNKHG CSES+F+
Sbjct: 63  PQKGPNSVVYCNKN-FDRTQISSLENQLDVVWPDVVTGNNTGFWEHEWNKHGSCSESQFN 122

Query: 124 EAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNG 183
           +  YFQTAINM + ++LL  L  GG+  +  +K+ Q ++  + + FG  P LRCKK    
Sbjct: 123 QTLYFQTAINMMNKVNLLKALGKGGITSDERTKSSQTMQKVLLAQFGNQPFLRCKKVGQ- 182

Query: 184 QVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           Q  L EIVMCF DDGVT+INC  ++ +C  +FIF
Sbjct: 183 QFWLLEIVMCFKDDGVTMINCQPSKVSCPPNFIF 214

[Close]
BLAST of Csa3G825050 vs. TrEMBL
Match: A0A067LAV9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15611 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 1 

Query: 12  FVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRC---VGRGTRSFTIHGLWPQ-KG 71
           F+ V+  L  +  +Q FD F+FVQQWP + C  +   C    G+    F IHGLWP  K 
Sbjct: 5   FIIVVLSLSVLCSAQEFDFFYFVQQWPGSYCDTKKSCCYPTTGKPAADFGIHGLWPNYKD 64

Query: 72  GRSVTNC-TGNQFDFTKIAHLENDLNVVWPNVV--TGNNKFFWGHEWNKHGICSESKFDE 131
           G   +NC + N F+  KI+ L + +   WP +   +GN   FW HEW KHG CSES  D+
Sbjct: 65  GTYPSNCDSSNPFNQNKISDLTSSMQKNWPTLACPSGNGVTFWSHEWEKHGTCSESVLDQ 124

Query: 132 AKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQ 191
             YFQ A+N++  ++LL VL   G+  NG S +   +++AI    G +P + C    +G 
Sbjct: 125 HGYFQAALNLKKKVNLLQVLNNAGISANGESYSLSSIKSAIQEAIGYNPWIECNNDESGN 184

Query: 192 VLLTEIVMCFDDDGVTLINC 205
             L ++ +C D  G  LI C
Sbjct: 185 SQLYQVYLCVDTSGSNLIEC 204

[Close]
BLAST of Csa3G825050 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33
Identity = 73/201 (36.32%), Postives = 105/201 (52.24%), Query Frame = 1 

Query: 16  LTILFPIV-----KSQTFDDFWFVQQWPPAVCTLQSGRCV---GRGTRSFTIHGLWPQ-K 75
           L ++ P V      S+ FD F+FVQQWP + C  Q   C    G+    F IHGLWP  K
Sbjct: 13  LLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYK 72

Query: 76  GGRSVTNCTGNQ-FDFTKIAHLENDLNVVWPNVV--TGNNKFFWGHEWNKHGICSESKFD 135
            G   +NC  ++ FD + I+ L   +   WP +   +G+ + FW HEW KHG CSES  D
Sbjct: 73  DGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVID 132

Query: 136 EAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNG 195
           + +YFQTA+N++   +LL  L   G+ P+G S + + +  +I    G  P + C +  +G
Sbjct: 133 QHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSG 192

Query: 196 QVLLTEIVMCFDDDGVTLINC 205
              L ++ +C D  G  LI C
Sbjct: 193 NSQLYQVYLCVDRSGSGLIEC 213

[Close]
BLAST of Csa3G825050 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 71/205 (34.63%), Postives = 100/205 (48.78%), Query Frame = 1 

Query: 7   VDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCV---GRGTRSFTIHGLW 66
           V+V+  + V   LF     + FD F+FV QWP A C      C    G+    F IHGLW
Sbjct: 7   VNVLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLW 66

Query: 67  PQ-KGGRSVTNCT-GNQFDFTKIAHLENDLNVVWPNVVTGNNKFF--WGHEWNKHGICSE 126
           P   GG   +NC   +QFD ++I+ L + L   WP +   +N+ F  W HEW KHG CSE
Sbjct: 67  PNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSE 126

Query: 127 SKFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKK 186
           S  D+ +YF+ A+ ++   +LL +L+  G+ P+       ++  AI    G  P + C K
Sbjct: 127 SVMDQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNK 186

Query: 187 ASNGQVLLTEIVMCFDDDGVTLINC 205
                  L +I +C D  G   I C
Sbjct: 187 DPERNAQLHQIYICVDTSGTEFIEC 211

[Close]
BLAST of Csa3G825050 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 71/203 (34.98%), Postives = 101/203 (49.75%), Query Frame = 1 

Query: 11  FFVFVLTILFPIVKS--QTFDDFWFVQQWPPAVCTLQSGRC---VGRGTRSFTIHGLWPQ 70
           FF+F+L +    V+S  Q FD F+FV QWP A C  +   C    G+    F IHGLWP 
Sbjct: 3   FFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPN 62

Query: 71  -KGGRSVTNCT-GNQFDFTKIAHLENDLNVVWPNVVTGNNKF--FWGHEWNKHGICSESK 130
            K G    NC   ++FD  +++ L +DL   WP +   +N    FW HEW KHG C+ES+
Sbjct: 63  YKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESE 122

Query: 131 FDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKAS 190
            D+  YF+  + ++   +LL  L   G+ P+      + +E  I    G  P + C K S
Sbjct: 123 LDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDS 182

Query: 191 NGQVLLTEIVMCFDDDGVTLINC 205
           +    L +I +C D      INC
Sbjct: 183 SHNSQLYQIYLCVDTSASKFINC 205

[Close]
BLAST of Csa3G825050 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1 

Query: 22  IVKSQT---FDDFWFVQQWPPAVCTLQSGRCV---GRGTRSFTIHGLWPQ-KGGRSVTNC 81
           +  SQT   F+ F++V  WP A+C  Q G C    G     F IHGLWPQ   G     C
Sbjct: 17  VSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLWPQFNNGTWPAFC 76

Query: 82  TG-NQFDFTKIAHLENDLNVVWPN----VVTGNNKFFWGHEWNKHGICSESKFDEAKYFQ 141
              N FD +KI+ L   +   W          N    W HEWNKHG C +S FD+  YF+
Sbjct: 77  DQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGTCVQSIFDQHSYFR 136

Query: 142 TAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTE 201
           T +  +H + LL++L   G+ PN    +   ++ AI    G  P + C +   G   L +
Sbjct: 137 TNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIECNEDVKGNKQLFQ 196

Query: 202 IVMCFDDDGVTLINC 205
           I +C D+     + C
Sbjct: 197 IYICLDNYAKEFVEC 211

[Close]
BLAST of Csa3G825050 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 81.3 bits (199), Expect = 8.3e-16
Identity = 61/187 (32.62%), Postives = 81/187 (43.32%), Query Frame = 1 

Query: 28  FDDFWFVQQWPPAVCT------LQSGRCVGRGTRS-FTIHGLWPQKGGRSVTNCT-GNQF 87
           FD F    QWP   C        ++  C G    + FTIHGLWP     S  +C   + F
Sbjct: 32  FDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSDF 91

Query: 88  DFTKIAHLENDLNVVWPNV-------VTGNNKFFWGHEWNKHGICSESKF-DEAKYFQTA 147
              +I+ L + L   WP++         G    FWGHEW KHG CS   F DE  YF T 
Sbjct: 92  KEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTT 151

Query: 148 INMRHGIDLLSVL-RTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTEI 198
           +N+    ++  VL + G V  N        + TAI + F   P + CK+ +     + EI
Sbjct: 152 LNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDA-----IDEI 211

[Close]
BLAST of Csa3G825050 vs. NCBI nr
Match: gi|449459530|ref|XP_004147499.1| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 4.2e-126
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60
           MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH
Sbjct: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60

Query: 61  GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120
           GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES
Sbjct: 61  GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120

Query: 121 KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA 180
           KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA
Sbjct: 121 KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA 180

Query: 181 SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF
Sbjct: 181 SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 217

[Close]
BLAST of Csa3G825050 vs. NCBI nr
Match: gi|659085407|ref|XP_008443402.1| (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 2.3e-116
Identity = 202/217 (93.09%), Postives = 209/217 (96.31%), Query Frame = 1 

Query: 1   MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60
           MEKTK  DVVFFVFVLTILFPIVKSQTFD+FWFVQQWPPA+CTLQSGRCVGRGTRSFTIH
Sbjct: 1   MEKTKR-DVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIH 60

Query: 61  GLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120
           GLWPQKGGRSVTNC+GN FDFTKIAHLE+DLNVVWPNVVTGNNKFFWGHEWNKHGICSES
Sbjct: 61  GLWPQKGGRSVTNCSGNSFDFTKIAHLESDLNVVWPNVVTGNNKFFWGHEWNKHGICSES 120

Query: 121 KFDEAKYFQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKA 180
           KFD+AKYFQTAINMRH IDLLSVLRTGG+ PNGASKAKQRVETAISSHF KDPILRCK A
Sbjct: 121 KFDQAKYFQTAINMRHSIDLLSVLRTGGIVPNGASKAKQRVETAISSHFAKDPILRCKTA 180

Query: 181 SNGQVLLTEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           SNGQVLLTEIV+CFDDDGVTLINCNKARSNCA SFIF
Sbjct: 181 SNGQVLLTEIVICFDDDGVTLINCNKARSNCARSFIF 216

[Close]
BLAST of Csa3G825050 vs. NCBI nr
Match: gi|976231|dbj|BAA10891.1| (ribonuclease (RNase LC1) [Luffa aegyptiaca])

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-86
Identity = 151/208 (72.60%), Postives = 170/208 (81.73%), Query Frame = 1 

Query: 10  VFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGR 69
           +  VFVLTILFP+VKSQTFD FW VQ WPPAVC+ Q GRCVG+G RSFTIHG+WPQKGG 
Sbjct: 8   IVLVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHGVWPQKGGT 67

Query: 70  SVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQ 129
           SV NC G  FDFTKI+HLE+ LNV WPNV+TGNNK+FWGHEWNKHGICS SKFD+  YFQ
Sbjct: 68  SVINCPGPTFDFTKISHLESTLNVDWPNVITGNNKWFWGHEWNKHGICSVSKFDQQAYFQ 127

Query: 130 TAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTE 189
            AINMR+ IDLLS LR GGV PNG SKA+QRV++AI +  GK+P+LRC + +  Q  L E
Sbjct: 128 MAINMRNSIDLLSALRVGGVVPNGRSKARQRVQSAIRAQLGKEPVLRC-RGTGRQSRLLE 187

Query: 190 IVMCFDDDGVTLINCNKARSNCAGSFIF 218
           IVMCFDDDGVTLINCN A SNC  SFIF
Sbjct: 188 IVMCFDDDGVTLINCNPANSNCPNSFIF 214

[Close]
BLAST of Csa3G825050 vs. NCBI nr
Match: gi|700204428|gb|KGN59561.1| (hypothetical protein Csa_3G825060 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-68
Identity = 122/210 (58.10%), Postives = 159/210 (75.71%), Query Frame = 1 

Query: 9   VVFFVFVLTI-LFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKG 68
           V+ FV  L+I LFPI+KSQ FD F+FVQQWPPAVC  ++G+CVG+G   FTIHG+WPQKG
Sbjct: 12  VLLFVVTLSISLFPIMKSQQFDKFYFVQQWPPAVCDGRTGKCVGKGMYYFTIHGVWPQKG 71

Query: 69  GRSVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKY 128
           G+SV NC G QFDF KI+ L N L+ +  +V+  +++F W HEWNKHG+CSES++   +Y
Sbjct: 72  GKSVINCPGTQFDFNKISSLANTLHQIMKDVINADDQFLWSHEWNKHGVCSESRYSMKQY 131

Query: 129 FQTAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLL 188
           FQ AINM++ I++LS LR GG+ PN   KAKQRVE A+ + +   P+LRCKK S+GQ LL
Sbjct: 132 FQMAINMKYKINVLSALRMGGITPNNHLKAKQRVEGAMFTAYNAYPLLRCKKDSSGQSLL 191

Query: 189 TEIVMCFDDDGVTLINCNKARSNCAGSFIF 218
           TE+VMCFD+DGVTL+NC   +SNC    +F
Sbjct: 192 TEVVMCFDNDGVTLLNCTTTKSNCDADVLF 221

[Close]
BLAST of Csa3G825050 vs. NCBI nr
Match: gi|778685547|ref|XP_004147497.2| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 7.0e-65
Identity = 113/195 (57.95%), Postives = 148/195 (75.90%), Query Frame = 1 

Query: 23  VKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCTGNQFDFT 82
           +KSQ FD F+FVQQWPPAVC  ++G+CVG+G   FTIHG+WPQKGG+SV NC G QFDF 
Sbjct: 1   MKSQQFDKFYFVQQWPPAVCDGRTGKCVGKGMYYFTIHGVWPQKGGKSVINCPGTQFDFN 60

Query: 83  KIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHGIDLLS 142
           KI+ L N L+ +  +V+  +++F W HEWNKHG+CSES++   +YFQ AINM++ I++LS
Sbjct: 61  KISSLANTLHQIMKDVINADDQFLWSHEWNKHGVCSESRYSMKQYFQMAINMKYKINVLS 120

Query: 143 VLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTEIVMCFDDDGVTLI 202
            LR GG+ PN   KAKQRVE A+ + +   P+LRCKK S+GQ LLTE+VMCFD+DGVTL+
Sbjct: 121 ALRMGGITPNNHLKAKQRVEGAMFTAYNAYPLLRCKKDSSGQSLLTEVVMCFDNDGVTLL 180

Query: 203 NCNKARSNCAGSFIF 218
           NC   +SNC    +F
Sbjct: 181 NCTTTKSNCDADVLF 195

The following BLAST results are available for this feature:
BLAST of Csa3G825050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNMC_MOMCH1.2e-5652.85Ribonuclease MC OS=Momordica charantia PE=1 SV=1[more]
RNS1_ARATH2.7e-3236.32Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1[more]
RNLE_SOLLC1.1e-2831.92Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2[more]
RNS3_ARATH5.2e-2834.98Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1[more]
RNLX_SOLLC5.4e-2532.08Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2[more]
BLAST of Csa3G825050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC37_CUCSA2.9e-126100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825050 PE=3 SV=1[more]
Q40115_LUFAE1.7e-8672.60Ribonuclease (RNase LC1) OS=Luffa aegyptiaca PE=2 SV=1[more]
A0A0A0LHQ9_CUCSA9.5e-6958.10Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825060 PE=3 SV=1[more]
Q40116_LUFAE4.9e-5752.80Ribonuclease (RNase LC2) OS=Luffa aegyptiaca PE=2 SV=1[more]
A0A067LAV9_JATCU2.9e-3337.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15611 PE=3 SV=1[more]
BLAST of Csa3G825050 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02990.11.5e-3336.32 ribonuclease 1[more]
AT1G14220.12.0e-3034.63 Ribonuclease T2 family protein[more]
AT1G26820.13.0e-2934.98 ribonuclease 3[more]
AT1G14210.12.0e-2533.33 Ribonuclease T2 family protein[more]
AT2G39780.18.3e-1632.62 ribonuclease 2[more]
BLAST of Csa3G825050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459530|ref|XP_004147499.1|4.2e-126100.00PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
gi|659085407|ref|XP_008443402.1|2.3e-11693.09PREDICTED: ribonuclease MC-like [Cucumis melo][more]
gi|976231|dbj|BAA10891.1|2.5e-8672.60ribonuclease (RNase LC1) [Luffa aegyptiaca][more]
gi|700204428|gb|KGN59561.1|1.4e-6858.10hypothetical protein Csa_3G825060 [Cucumis sativus][more]
gi|778685547|ref|XP_004147497.2|7.0e-6557.95PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001568RNase_T2-like
IPR018188RNase_T2_His_AS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0033897ribonuclease T2 activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0008152 metabolic process
biological_process GO:0009651 response to salt stress
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G825050.1Csa3G825050.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3DG3DSA:3.90.730.10coord: 28..216
score: 3.1
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 9..204
score: 1.9
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 31..204
score: 3.6
IPR001568Ribonuclease T2-likeunknownSSF55895Ribonuclease Rh-likecoord: 28..217
score: 3.66
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 57..64
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G825050MELO3C012100Melon (DHL92) v3.5.1cumeB179
Csa3G825050ClCG10G015160Watermelon (Charleston Gray)cuwcgB194
Csa3G825050ClCG05G024250Watermelon (Charleston Gray)cuwcgB227
Csa3G825050Lsi03G014920Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G825050MELO3C012100.2Melon (DHL92) v3.6.1cumedB161
Csa3G825050Cla97C10G198010Watermelon (97103) v2cuwmbB186
Csa3G825050Bhi11G002474Wax gourdcuwgoB220
Csa3G825050CSPI03G38930Wild cucumber (PI 183967)cpicuB120
Csa3G825050CSPI05G23770Wild cucumber (PI 183967)cpicuB229
Csa3G825050Cucsa.285040Cucumber (Gy14) v1cgycuB408
Csa3G825050Cucsa.338800Cucumber (Gy14) v1cgycuB478
Csa3G825050CmoCh14G005940Cucurbita moschata (Rifu)cmocuB226
Csa3G825050CsGy3G036460Cucumber (Gy14) v2cgybcuB110
Csa3G825050CsGy5G023300Cucumber (Gy14) v2cgybcuB216
Csa3G825050Carg02248Silver-seed gourdcarcuB0288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa3G825050Csa5G636520Cucumber (Chinese Long) v2cucuB103
Csa3G825050Csa5G605140Cucumber (Chinese Long) v2cucuB106
The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G825050Melon (DHL92) v3.6.1cumedB155
Csa3G825050Melon (DHL92) v3.6.1cumedB207
Csa3G825050Silver-seed gourdcarcuB0237
Csa3G825050Silver-seed gourdcarcuB0467
Csa3G825050Watermelon (97103) v2cuwmbB254
Csa3G825050Wax gourdcuwgoB267
Csa3G825050Cucumber (Gy14) v1cgycuB228
Csa3G825050Cucurbita maxima (Rimu)cmacuB125
Csa3G825050Cucurbita maxima (Rimu)cmacuB239
Csa3G825050Cucurbita maxima (Rimu)cmacuB284
Csa3G825050Cucurbita maxima (Rimu)cmacuB704
Csa3G825050Cucurbita moschata (Rifu)cmocuB111
Csa3G825050Cucurbita moschata (Rifu)cmocuB272
Csa3G825050Cucurbita moschata (Rifu)cmocuB695
Csa3G825050Melon (DHL92) v3.5.1cumeB174
Csa3G825050Melon (DHL92) v3.5.1cumeB223
Csa3G825050Watermelon (Charleston Gray)cuwcgB178
Csa3G825050Watermelon (97103) v1cuwmB183
Csa3G825050Watermelon (97103) v1cuwmB198
Csa3G825050Watermelon (97103) v1cuwmB238
Csa3G825050Cucurbita pepo (Zucchini)cpecuB170
Csa3G825050Cucurbita pepo (Zucchini)cpecuB597
Csa3G825050Cucurbita pepo (Zucchini)cpecuB670
Csa3G825050Bottle gourd (USVL1VR-Ls)culsiB176
Csa3G825050Cucumber (Gy14) v2cgybcuB215