CmoCh14G005940 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G005940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(S-ribonuclease) (S1-RNase)
LocationCmo_Chr14 : 3010544 .. 3011759 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAATCACCTTCCATAGTTTCTATATTCAACTTCGTCTTCGTCGTCTTAATATTATGTGTAAATGCTCAATTTGATTATTTTCAAATGGTTCAACAATGGCCTCCAGCTAAATGTAGCAGCGTTAAAGTAAGATGTCATGTTCAACCTCCAACCATGTTCACAATTCATGGTTTGTGGCCGAGCAATTACTCAAATGCTAGACTTGTTTGTGCGCCACAACCATTTAATCCAACTCAGGTTTTTAGCCATCTTCTTCTGCATTTCCATTTTCTTTTTTTTCTTTCTTTCTTTTATTATTTCATTTTTTTTTTGTTTGTTTGTACTCAATACTCTACAAATTTTAAAGTATTTAATAAGTCTCCAAATATATATTATTATTATGTTTAATTTTTTTTGTTTCAAATTAGTATATGCATGGAACATAAAATTTCATAGATAAGAATTTCTATAGGATGGTTTGGACCGAGTAAAAGCTTAGTCAATGCCTAAAACCTATTCTATATATTGCCAATCATAAATCCTTGTGGTCAACACAATAAAGATTATTGTCTCAAATAATCGTAAGTACTGTCAAATGTAAATGTTCTTGGCCGTGTCTGTCAAATGTAAATGTTGATTTTGGTTGGGTTTATGATGTCCCTTTAGTTTTGGAATAGAAATAAAGTTGAAACTTTAGAACTTATTAAAAAAAAAAAAAATTCTAGATGGTAAAAACATTAAATATCTTCTTATTTTGTTTTAGATTGCAGCATTAAGACCCCAACTAAATACCTATTGGCCAGACGTGATACAAGGAAAGAACCAACAATTTTGGCAGCATGAATGGGATAGACATGGAATATGTTCAAATCCTCCTTTCAATCAACTTCAATATTTTCAAATAACTCTAAATATTCGTACAAATCATAGCTACGATCTCCTGACCATCTTAAATGCGGCGGGACTAGGCCCGTCTGACACAAATATTAGAGAATACAAAGATATAGAAGGTGCTATTCAAGCTGCCACAGGTAAGAAGCCAGGTTTACGTTGCAACATCAATGCACAATCTAAAGAAAAAAAACAATTGCTTGAAATCATCTTGTGCTTCGACAAAGATGGTATCACTCTAATTGATTGTACTGAATTTGCTGGAATCACGTGTCCTCCACAATTTGTGTGGCCCGATCGACAACCTTTAAATTTGGTCAGTACAGATGGAGAGCTCTAA

mRNA sequence

ATGGCTAAATCACCTTCCATAGTTTCTATATTCAACTTCGTCTTCGTCGTCTTAATATTATGTGTAAATGCTCAATTTGATTATTTTCAAATGGTTCAACAATGGCCTCCAGCTAAATGTAGCAGCGTTAAAGTAAGATGTCATGTTCAACCTCCAACCATGTTCACAATTCATGGTTTGTGGCCGAGCAATTACTCAAATGCTAGACTTGTTTATAAGAATTTCTATAGGATGGTTTGGACCGAATTATTGTCTCAAATAATCATTGCAGCATTAAGACCCCAACTAAATACCTATTGGCCAGACGTGATACAAGGAAAGAACCAACAATTTTGGCAGCATGAATGGGATAGACATGGAATATGTTCAAATCCTCCTTTCAATCAACTTCAATATTTTCAAATAACTCTAAATATTCGTACAAATCATAGCTACGATCTCCTGACCATCTTAAATGCGGCGGGACTAGGCCCGTCTGACACAAATATTAGAGAATACAAAGATATAGAAGGTGCTATTCAAGCTGCCACAGGTAAGAAGCCAGGTTTACGTTGCAACATCAATGCACAATCTAAAGAAAAAAAACAATTGCTTGAAATCATCTTGTGCTTCGACAAAGATGGTATCACTCTAATTGATTGTACTGAATTTGCTGGAATCACGTGTCCTCCACAATTTGTGTGGCCCGATCGACAACCTTTAAATTTGGTCAGTACAGATGGAGAGCTCTAA

Coding sequence (CDS)

ATGGCTAAATCACCTTCCATAGTTTCTATATTCAACTTCGTCTTCGTCGTCTTAATATTATGTGTAAATGCTCAATTTGATTATTTTCAAATGGTTCAACAATGGCCTCCAGCTAAATGTAGCAGCGTTAAAGTAAGATGTCATGTTCAACCTCCAACCATGTTCACAATTCATGGTTTGTGGCCGAGCAATTACTCAAATGCTAGACTTGTTTATAAGAATTTCTATAGGATGGTTTGGACCGAATTATTGTCTCAAATAATCATTGCAGCATTAAGACCCCAACTAAATACCTATTGGCCAGACGTGATACAAGGAAAGAACCAACAATTTTGGCAGCATGAATGGGATAGACATGGAATATGTTCAAATCCTCCTTTCAATCAACTTCAATATTTTCAAATAACTCTAAATATTCGTACAAATCATAGCTACGATCTCCTGACCATCTTAAATGCGGCGGGACTAGGCCCGTCTGACACAAATATTAGAGAATACAAAGATATAGAAGGTGCTATTCAAGCTGCCACAGGTAAGAAGCCAGGTTTACGTTGCAACATCAATGCACAATCTAAAGAAAAAAAACAATTGCTTGAAATCATCTTGTGCTTCGACAAAGATGGTATCACTCTAATTGATTGTACTGAATTTGCTGGAATCACGTGTCCTCCACAATTTGTGTGGCCCGATCGACAACCTTTAAATTTGGTCAGTACAGATGGAGAGCTCTAA
BLAST of CmoCh14G005940 vs. Swiss-Prot
Match: RNMC_MOMCH (Ribonuclease MC OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.4e-35
Identity = 82/204 (40.20%), Postives = 112/204 (54.90%), Query Frame = 1

Query: 26  FDYFQMVQQWPPAKCSSVKV-RCHVQPPTMFTIHGLWPSNYSNARLVYKNFYRMVWTELL 85
           FD F  VQQWPPA CS  K   C       FTIHGLWP     +            T+  
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITK-- 60

Query: 86  SQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTNHS 145
               I+ L+ QLNT WP+V++  NQQFW HEW +HG CS   FNQ  YF++ +++R N  
Sbjct: 61  ----ISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNN-- 120

Query: 146 YDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEIILCF 205
           YD++  L     GP+    +  + I+G ++A  GK PGLRC  + Q+K    L++++ CF
Sbjct: 121 YDIIGALRPHAAGPNG-RTKSRQAIKGFLKAKFGKFPGLRCRTDPQTK-VSYLVQVVACF 180

Query: 206 DKDGITLIDCTEFAGITCPPQFVW 229
            +DG TLIDCT     TC   F++
Sbjct: 181 AQDGSTLIDCTR---DTCGANFIF 191

BLAST of CmoCh14G005940 vs. Swiss-Prot
Match: RNS3_PYRPY (Ribonuclease S-3 OS=Pyrus pyrifolia PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-25
Identity = 76/209 (36.36%), Postives = 104/209 (49.76%), Query Frame = 1

Query: 13  FVFVVLILCVNAQ-FDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNY---SNA 72
           F+ +VLILC +   +DYFQ  QQ+  A C+S +  C   P  +FT+HGLWPSN      +
Sbjct: 9   FLLIVLILCSSTVGYDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPS 68

Query: 73  RLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVI-QGKNQQFWQHEWDRHGICSNPPF 132
           +   KN  +              L  QL   WP+V  + KN  FW  EW +HG C  P  
Sbjct: 69  KCPIKNIRKRE----------KLLEHQLEIIWPNVFDRTKNNLFWDKEWMKHGSCGYPTI 128

Query: 133 -NQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQ-AATGKKPGLRC 192
            N+  YF+  + +  +   ++  IL+ A + P D   R   DIE AI+  A  KKP L+C
Sbjct: 129 DNENHYFETVIKMYISKKQNVSRILSKAKIEP-DGKKRALLDIENAIRNGADNKKPKLKC 188

Query: 193 NINAQSKEKKQLLEIILCFDKDGITLIDC 215
                + E   L+EI LC DK G   IDC
Sbjct: 189 QKKGTTTE---LVEITLCSDKSGEHFIDC 203

BLAST of CmoCh14G005940 vs. Swiss-Prot
Match: RNS6_PYRPY (Ribonuclease S-6 OS=Pyrus pyrifolia PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.9e-24
Identity = 75/225 (33.33%), Postives = 112/225 (49.78%), Query Frame = 1

Query: 13  FVFVVLILCVNAQ-FDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNARLV 72
           F  +VLI C +   ++YFQ  QQ+ PA C+S    C   P  +FT+HGLWPSN      +
Sbjct: 14  FSLIVLISCSSTMGYNYFQFTQQYQPAVCNSNPTPCKDPPDKLFTVHGLWPSNDVGDDPI 73

Query: 73  Y-KNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQ-QFWQHEWDRHGICSNPPF-- 132
           Y KN       + +    I  L  QL   WP+V+   +   FW  +W++HG C   P   
Sbjct: 74  YCKN-------KTIKSQQIGNLTAQLIIIWPNVLDRTDHVGFWNRQWNKHGSCGKAPTIK 133

Query: 133 NQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAAT-GKKPGLRCN 192
           +++ YF+  + +      ++  IL+ A + P +  IR   DI  AI+  T  KKP L+C 
Sbjct: 134 DEMHYFKTVIKMYITQKQNVSEILSRAKIEP-EGKIRRRDDIINAIRLGTKDKKPKLKCQ 193

Query: 193 INAQSKEKKQLLEIILCFDKDGITLIDC--TEFAG--ITCPPQFV 228
            N Q+ E   L+EI +C D++    IDC  + F G    CP   +
Sbjct: 194 KNNQTTE---LVEITICSDRNLTQFIDCPRSSFKGSPFHCPTNHI 227

BLAST of CmoCh14G005940 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-24
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 1

Query: 26  FDYFQMVQQWPPAKCSSVKVRCHV---QPPTMFTIHGLWPSNYSNARLVYKNFYRMVWTE 85
           FD+F  VQQWP + C + K  C+    +P   F IHGLWP NY +    Y +      ++
Sbjct: 30  FDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP-NYKDG--TYPS--NCDASK 89

Query: 86  LLSQIIIAALRPQLNTYWPDVI--QGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIR 145
                 I+ L   +   WP +    G  + FW+HEW++HG CS    +Q +YFQ  LN++
Sbjct: 90  PFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLK 149

Query: 146 TNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEI 205
                +LL  L  AG+ P D      + I  +I+ + G  P + CN +       QL ++
Sbjct: 150 --QKTNLLGALTKAGINP-DGKSYSLESIRDSIKESIGFTPWVECNRDGSG--NSQLYQV 209

Query: 206 ILCFDKDGITLIDCTEFAGITCPPQFVWP 230
            LC D+ G  LI+C  F    C  +  +P
Sbjct: 210 YLCVDRSGSGLIECPVFPHGKCGAEIEFP 228

BLAST of CmoCh14G005940 vs. Swiss-Prot
Match: RNS1_PYRPY (Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23
Identity = 67/211 (31.75%), Postives = 107/211 (50.71%), Query Frame = 1

Query: 10  IFNFVFVVLILCVNAQ---FDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYS 69
           +F  VF +++L +++    +DYFQ  QQ+ PA C+S    C+     +FT+HGLWPSN +
Sbjct: 9   MFTMVFSLIVLILSSSTVGYDYFQFTQQYQPAVCNSNPTPCNDPTDKLFTVHGLWPSNRN 68

Query: 70  NARLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVI-QGKNQQFWQHEWDRHGICSNP 129
                         T  L+   I  +  QL   WP+V+ +  +  FW+ EW +HG C  P
Sbjct: 69  GPD------PEKCKTTALNSQKIGNMTAQLEIIWPNVLNRSDHVGFWEKEWIKHGTCGYP 128

Query: 130 PF-NQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGK-KPGL 189
              + + Y Q  + +      ++  IL+ A + P+ TN R   DIE AI+  T   KP  
Sbjct: 129 TIKDDMHYLQTVIRMYITQKQNVSAILSKAAIQPNGTN-RPLVDIENAIRRGTNNTKPKF 188

Query: 190 RCNINAQSKEKKQLLEIILCFDKDGITLIDC 215
           +C  N  ++   +L+E+ LC D+D    I+C
Sbjct: 189 KCQKN--TRTTTELVEVTLCSDRDLKKFINC 210

BLAST of CmoCh14G005940 vs. TrEMBL
Match: A0A0A0LDS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.7e-55
Identity = 104/206 (50.49%), Postives = 138/206 (66.99%), Query Frame = 1

Query: 12  NFVFVVLIL---CVNAQFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNA 71
           N VF++++L   CV+ Q+ +FQMVQQW PAKCSS +V+CHV P  MFTIHGLWPSN+++ 
Sbjct: 4   NQVFLLVLLGLWCVDGQYQFFQMVQQWGPAKCSSGRVKCHVTPKPMFTIHGLWPSNFTDL 63

Query: 72  RLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFN 131
            L Y +      ++      I  L+ +L+ YWPDV++GK+  FW+HEW++HG CSNPPFN
Sbjct: 64  MLHYCSLQSFDASQ------IKTLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFN 123

Query: 132 QLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNIN 191
             QYF++ LNIR    YDL+ ILN AGL PS + + +Y DI   IQAA   KP L+CN  
Sbjct: 124 IFQYFELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDK 183

Query: 192 AQSKEKKQLLEIILCFDKDGITLIDC 215
               +  QL E+ILCFD  G+  IDC
Sbjct: 184 NGQGQNNQLWEVILCFDHGGVNPIDC 203

BLAST of CmoCh14G005940 vs. TrEMBL
Match: A0A0A0LAB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 106/222 (47.75%), Postives = 132/222 (59.46%), Query Frame = 1

Query: 10  IFNFVFVVLILCVNA-QFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNA 69
           IF    +  +L VN   FD+FQ+VQQW P  CS    +C+ QP  MFTIHGLWPSN+S  
Sbjct: 5   IFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPSNFSTV 64

Query: 70  RLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFN 129
            ++     +     L  Q  + +L   LN YWPDVI GKN  FW+HEW +H  C +PPF 
Sbjct: 65  PILCPRTKK-----LFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFT 124

Query: 130 QLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNIN 189
              YF I+L  R N +YDLLTILN AGL          +++   I+ ATG +PG+RCNIN
Sbjct: 125 IFWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNIN 184

Query: 190 AQSKEKKQLLEIILCFDKDGITLIDCTEFAGITC--PPQFVW 229
             +K K QL EI+LCF  DG TLIDC  F   TC   P+FVW
Sbjct: 185 GITK-KLQLKEIVLCFGNDGTTLIDCPSFVSNTCTSQPKFVW 220

BLAST of CmoCh14G005940 vs. TrEMBL
Match: A0A0A0LAN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.7e-48
Identity = 105/224 (46.88%), Postives = 140/224 (62.50%), Query Frame = 1

Query: 9   SIFNFVFVVLILCVNA--QFDYFQMVQQWPPAKCSS-VKVR-CHVQPPTMFTIHGLWPSN 68
           SI    F+ L++ VN    F++FQ V+QW P  C++  +V  CH  P   FTIHGLWPSN
Sbjct: 4   SILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSN 63

Query: 69  YSNARLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSN 128
           +SNA L+ ++  + ++++++S      L  QLN  WPD+  G N +FW HEWD HG CS+
Sbjct: 64  HSNAHLLCQS--KTIYSKVIS------LEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSD 123

Query: 129 PPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLR 188
           PPF+  QYFQI+LN+     +DLLTIL AAGL P  +     ++I   IQ  T K PG+R
Sbjct: 124 PPFSLFQYFQISLNLL--RKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIR 183

Query: 189 CNINAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITCPPQFVW 229
           CN N ++  K QL EI+LC +KDG TLIDC  F   TC   FVW
Sbjct: 184 CNKNVKT-GKSQLNEIVLCLEKDGATLIDCPTFVSNTCAKSFVW 216

BLAST of CmoCh14G005940 vs. TrEMBL
Match: B5KLI2_PRUAV (S7-RNase OS=Prunus avium GN=S-RNase PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-35
Identity = 88/226 (38.94%), Postives = 120/226 (53.10%), Query Frame = 1

Query: 1   MAKSPSIVSIFNFVFVVLILCVNAQFDYFQMVQQWPPAKCS-SVKVRC-HVQPPTMFTIH 60
           M KS     +  F F +  +     +DYFQ VQQWPP  C   +K  C + +P   FTIH
Sbjct: 3   MLKSSLAFLVLAFAFFLCFIMSTGSYDYFQFVQQWPPTNCRVRIKQPCSNPRPLQYFTIH 62

Query: 61  GLWPSNYSNARLVYKNF-YRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWD 120
           GLWPSNYSN  +       +  W +L        +R +L   WPDV  G + +FW+ EW+
Sbjct: 63  GLWPSNYSNPTMPSNCIGSQFEWRKLYPH-----MRSKLKISWPDVESGNDTKFWEGEWN 122

Query: 121 RHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAAT 180
           +HG CS    NQ+QYF+ +  +    SY++  IL  A + PS T    Y DI   I+AAT
Sbjct: 123 KHGTCSVEKLNQMQYFERSYAMW--RSYNITKILQNASIVPSTTRTWTYSDIVSPIKAAT 182

Query: 181 GKKPGLRCNINAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITCP 224
           G+ P LRC    Q K+ + L E++LCFD + +  IDC   AG   P
Sbjct: 183 GRTPLLRCK---QDKKTQLLHEVVLCFDYNALIHIDCNRTAGCRNP 218

BLAST of CmoCh14G005940 vs. TrEMBL
Match: Q9AVS5_PRUAV (RNase S5 OS=Prunus avium GN=S5 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.9e-35
Identity = 84/221 (38.01%), Postives = 119/221 (53.85%), Query Frame = 1

Query: 1   MAKSPSIVSIFNFVFVVLILCVNAQFDYFQMVQQWPPAKCSSVKVRC-HVQPPTMFTIHG 60
           M KS   + +  F F    +  +  +DYFQ VQQWPP  C  V+ +C + +P   FTIHG
Sbjct: 3   MLKSSLALLVLAFAFFFCYVMSSGSYDYFQFVQQWPPTNC-RVRTKCSNPRPLQYFTIHG 62

Query: 61  LWPSNYSNARLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRH 120
           LWPSNYSN ++        + ++     +   LR +L   WPDV  G + +FW  EW++H
Sbjct: 63  LWPSNYSNPKMP----SNCIGSQFNESKVYPRLRSKLRISWPDVESGNDTKFWGDEWNKH 122

Query: 121 GICSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGK 180
           G CS    NQ QYF+ +  +    SY++  IL  A + P+ T    Y DI   I+ AT +
Sbjct: 123 GTCSQRILNQFQYFERSQQMW--RSYNITNILKKAQIVPNATQTWSYSDIVSPIKTATNR 182

Query: 181 KPGLRCNINAQSKEKKQLL-EIILCFDKDGITLIDCTEFAG 220
            P LRC    +S+   QLL E++LCFD + +  IDC   AG
Sbjct: 183 TPLLRCKSQPKSQANFQLLHEVVLCFDYNALVHIDCNRTAG 216

BLAST of CmoCh14G005940 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 1

Query: 26  FDYFQMVQQWPPAKCSSVKVRCHV---QPPTMFTIHGLWPSNYSNARLVYKNFYRMVWTE 85
           FD+F  VQQWP + C + K  C+    +P   F IHGLWP NY +    Y +      ++
Sbjct: 30  FDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP-NYKDG--TYPS--NCDASK 89

Query: 86  LLSQIIIAALRPQLNTYWPDVI--QGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIR 145
                 I+ L   +   WP +    G  + FW+HEW++HG CS    +Q +YFQ  LN++
Sbjct: 90  PFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLK 149

Query: 146 TNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEI 205
                +LL  L  AG+ P D      + I  +I+ + G  P + CN +       QL ++
Sbjct: 150 --QKTNLLGALTKAGINP-DGKSYSLESIRDSIKESIGFTPWVECNRDGSG--NSQLYQV 209

Query: 206 ILCFDKDGITLIDCTEFAGITCPPQFVWP 230
            LC D+ G  LI+C  F    C  +  +P
Sbjct: 210 YLCVDRSGSGLIECPVFPHGKCGAEIEFP 228

BLAST of CmoCh14G005940 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 72/233 (30.90%), Postives = 100/233 (42.92%), Query Frame = 1

Query: 13  FVFVVLILCVNAQ-----FDYFQMVQQWPPAKCSSVKVRCHVQ---PPTMFTIHGLWPSN 72
           F+F++ +  +  Q     FD+F  V QWP A C S    C+ Q   P   F IHGLWP N
Sbjct: 4   FIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWP-N 63

Query: 73  YSNARLVYKNFYRMVWTE------LLSQIIIAALRPQLNTYWPDVIQGKNQ--QFWQHEW 132
           Y              W +          + ++ L   L   WP +    N   +FW HEW
Sbjct: 64  YKTGG----------WPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEW 123

Query: 133 DRHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAA 192
           ++HG C+    +Q  YF+  L ++     +LL  L  AG+ P D    E KDIE  I+  
Sbjct: 124 EKHGTCAESELDQHDYFEAGLKLK--QKANLLHALTNAGIKPDD-KFYEMKDIENTIKQV 183

Query: 193 TGKKPGLRCNINAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITCPPQFVWP 230
            G  PG+ C  N  S    QL +I LC D      I+C       C  +  +P
Sbjct: 184 VGFAPGIEC--NKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFP 220

BLAST of CmoCh14G005940 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 67/210 (31.90%), Postives = 96/210 (45.71%), Query Frame = 1

Query: 26  FDYFQMVQQWPPAKCSSVKVRCHV---QPPTMFTIHGLWPSNYSNARLVYK-----NFYR 85
           FD+F  V QWP A C + +  C+    +P   F IHGLWP NY+             F R
Sbjct: 28  FDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWP-NYNGGSWPSNCDPDSQFDR 87

Query: 86  MVWTELLSQIIIAALRPQLNTYWPDVIQGKNQ--QFWQHEWDRHGICSNPPFNQLQYFQI 145
              ++L+S          L   WP +    N+   FW+HEW++HG CS    +Q +YF+ 
Sbjct: 88  SQISDLVSS---------LKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFEN 147

Query: 146 TLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKK 205
            L ++     +LL IL  +G+ P D        I  AI+   G  PG+ C  N   +   
Sbjct: 148 ALKLK--QKANLLQILKNSGINPDD-GFYNLDKITNAIKDGIGFTPGIEC--NKDPERNA 207

Query: 206 QLLEIILCFDKDGITLIDCTEFAGITCPPQ 226
           QL +I +C D  G   I+C      +CP Q
Sbjct: 208 QLHQIYICVDTSGTEFIECPVLPRGSCPSQ 222

BLAST of CmoCh14G005940 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 102.1 bits (253), Expect = 5.1e-22
Identity = 68/223 (30.49%), Postives = 98/223 (43.95%), Query Frame = 1

Query: 26  FDYFQMVQQWPPAKCSSVKVRCHVQPPTM------FTIHGLWPSNYSNARLVYKNFYRMV 85
           F++F  V  WP A C S K  C   PPT       F IHGLWP   +     + +     
Sbjct: 26  FNFFYWVNYWPGAICDSQKGCC---PPTKGNTASDFIIHGLWPQFNNGTWPAFCD----- 85

Query: 86  WTELLSQIIIAALRPQLNTYWPD----VIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQI 145
            T L     I+ L  Q+   W +             W+HEW++HG C    F+Q  YF+ 
Sbjct: 86  QTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGTCVQSIFDQHSYFR- 145

Query: 146 TLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKK 205
             N++  H   LL IL   G+ P+D       +I+ AI+ A G  PG+ CN +   K  K
Sbjct: 146 -TNLKFKHKVHLLNILIQKGIKPND-GFYSLDEIKNAIKCAIGFAPGIECNEDV--KGNK 205

Query: 206 QLLEIILCFDKDGITLIDCTEFAGITCPPQFVW---PDRQPLN 236
           QL +I +C D      ++C      +C  +  +   P+R  LN
Sbjct: 206 QLFQIYICLDNYAKEFVECPYVPDKSCASKIKFPSLPERDSLN 235

BLAST of CmoCh14G005940 vs. NCBI nr
Match: gi|700203881|gb|KGN59014.1| (hypothetical protein Csa_3G743990 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-54
Identity = 104/206 (50.49%), Postives = 138/206 (66.99%), Query Frame = 1

Query: 12  NFVFVVLIL---CVNAQFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNA 71
           N VF++++L   CV+ Q+ +FQMVQQW PAKCSS +V+CHV P  MFTIHGLWPSN+++ 
Sbjct: 4   NQVFLLVLLGLWCVDGQYQFFQMVQQWGPAKCSSGRVKCHVTPKPMFTIHGLWPSNFTDL 63

Query: 72  RLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFN 131
            L Y +      ++      I  L+ +L+ YWPDV++GK+  FW+HEW++HG CSNPPFN
Sbjct: 64  MLHYCSLQSFDASQ------IKTLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFN 123

Query: 132 QLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNIN 191
             QYF++ LNIR    YDL+ ILN AGL PS + + +Y DI   IQAA   KP L+CN  
Sbjct: 124 IFQYFELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDK 183

Query: 192 AQSKEKKQLLEIILCFDKDGITLIDC 215
               +  QL E+ILCFD  G+  IDC
Sbjct: 184 NGQGQNNQLWEVILCFDHGGVNPIDC 203

BLAST of CmoCh14G005940 vs. NCBI nr
Match: gi|778683692|ref|XP_011651927.1| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 106/222 (47.75%), Postives = 132/222 (59.46%), Query Frame = 1

Query: 10  IFNFVFVVLILCVNA-QFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNA 69
           IF    +  +L VN   FD+FQ+VQQW P  CS    +C+ QP  MFTIHGLWPSN+S  
Sbjct: 5   IFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPMFTIHGLWPSNFSTV 64

Query: 70  RLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFN 129
            ++     +     L  Q  + +L   LN YWPDVI GKN  FW+HEW +H  C +PPF 
Sbjct: 65  PILCPRTKK-----LFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFT 124

Query: 130 QLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNIN 189
              YF I+L  R N +YDLLTILN AGL          +++   I+ ATG +PG+RCNIN
Sbjct: 125 IFWYFDISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNIN 184

Query: 190 AQSKEKKQLLEIILCFDKDGITLIDCTEFAGITC--PPQFVW 229
             +K K QL EI+LCF  DG TLIDC  F   TC   P+FVW
Sbjct: 185 GITK-KLQLKEIVLCFGNDGTTLIDCPSFVSNTCTSQPKFVW 220

BLAST of CmoCh14G005940 vs. NCBI nr
Match: gi|700203887|gb|KGN59020.1| (hypothetical protein Csa_3G745530 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48
Identity = 105/224 (46.88%), Postives = 140/224 (62.50%), Query Frame = 1

Query: 9   SIFNFVFVVLILCVNA--QFDYFQMVQQWPPAKCSS-VKVR-CHVQPPTMFTIHGLWPSN 68
           SI    F+ L++ VN    F++FQ V+QW P  C++  +V  CH  P   FTIHGLWPSN
Sbjct: 4   SILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSN 63

Query: 69  YSNARLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSN 128
           +SNA L+ ++  + ++++++S      L  QLN  WPD+  G N +FW HEWD HG CS+
Sbjct: 64  HSNAHLLCQS--KTIYSKVIS------LEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSD 123

Query: 129 PPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLR 188
           PPF+  QYFQI+LN+     +DLLTIL AAGL P  +     ++I   IQ  T K PG+R
Sbjct: 124 PPFSLFQYFQISLNLL--RKFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIR 183

Query: 189 CNINAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITCPPQFVW 229
           CN N ++  K QL EI+LC +KDG TLIDC  F   TC   FVW
Sbjct: 184 CNKNVKT-GKSQLNEIVLCLEKDGATLIDCPTFVSNTCAKSFVW 216

BLAST of CmoCh14G005940 vs. NCBI nr
Match: gi|659085730|ref|XP_008443571.1| (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 105/230 (45.65%), Postives = 132/230 (57.39%), Query Frame = 1

Query: 11  FNFVFVVLILCVNAQ-FDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNAR 70
           F    + L+L VN   FD+FQ+V+QW P  C+    +CH QP   FTIHGLWPSN+SNAR
Sbjct: 6   FILCLLSLLLFVNGYPFDFFQLVEQWGPNTCND-GTQCHAQPQPEFTIHGLWPSNFSNAR 65

Query: 71  LVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQ 130
           L           +L     I+ L   L+ YWPDVI G N+ FW +EW +HG C +PPFN 
Sbjct: 66  LFCAT------RKLFDNGQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNI 125

Query: 131 LQYFQITLNIRTNHSYDLLTILNAA----------GLGPSDTNIREYKDIEGAIQAATGK 190
            QYFQ++L+   + +YDLL ILN            GL P        KDI   I  AT K
Sbjct: 126 TQYFQLSLD--HHRTYDLLKILNGVWHRNRQMPNNGLAP--------KDILNPIFNATNK 185

Query: 191 KPGLRCNINAQSKEKKQLLEIILCFDKDGITLIDCTEFAGITC-PPQFVW 229
             G+RCN N  +K K QL EI+LCFD +G TLIDC +F   +C  P+FVW
Sbjct: 186 TAGIRCNKNGITK-KLQLHEIVLCFDNNGTTLIDCPKFVSNSCNQPKFVW 217

BLAST of CmoCh14G005940 vs. NCBI nr
Match: gi|325979687|gb|ADZ48272.1| (S-locus-associated ribonuclease [Prunus speciosa])

HSP 1 Score: 159.5 bits (402), Expect = 7.6e-36
Identity = 90/239 (37.66%), Postives = 122/239 (51.05%), Query Frame = 1

Query: 3   KSPSIVSIFNFVFVVLILCVNAQFDYFQMVQQWPPAKCSSVKVRCHVQPPT-MFTIHGLW 62
           KS     +  F F + ++     + YFQ VQQWPP  C      CH Q P  MFTIHGLW
Sbjct: 5   KSSPAFLVLAFAFFLCLIMSTGSYAYFQFVQQWPPTTCRISNKSCHQQRPLQMFTIHGLW 64

Query: 63  PSNYSNARLVYKNFYRMVWTELLSQIIIAALRPQLNTYWPDVIQGKNQQFWQHEWDRHGI 122
           PSNYSN R           ++   + +   LR +L   WP+V  G + +FW+ EW++HG 
Sbjct: 65  PSNYSNPRKPSS----CTGSQFKLEKLYPKLRSKLKISWPNVESGNDTKFWESEWNKHGT 124

Query: 123 CSNPPFNQLQYFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKP 182
           CS    NQ QYFQ +  I   ++Y++  IL  A + PS TN  +Y DI   I+A T   P
Sbjct: 125 CSEQTLNQFQYFQRSHGIW--NAYNMTNILKRAQIIPSATNTWKYSDIVSPIKAVTKTTP 184

Query: 183 GLRCN----------INAQSKEKKQLL-EIILCFDKDGITLIDCTEFAGITCPPQFVWP 230
            LRC             ++S+ K QLL E++LCFD D +  IDC   AG       ++P
Sbjct: 185 LLRCKHDPKPLQSHPAQSKSRPKPQLLHEVVLCFDYDALKQIDCNRTAGCLNQVDILFP 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNMC_MOMCH6.4e-3540.20Ribonuclease MC OS=Momordica charantia PE=1 SV=1[more]
RNS3_PYRPY3.5e-2536.36Ribonuclease S-3 OS=Pyrus pyrifolia PE=1 SV=1[more]
RNS6_PYRPY3.9e-2433.33Ribonuclease S-6 OS=Pyrus pyrifolia PE=1 SV=1[more]
RNS1_ARATH6.7e-2432.06Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1[more]
RNS1_PYRPY1.9e-2331.75Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LDS5_CUCSA8.7e-5550.49Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1[more]
A0A0A0LAB0_CUCSA2.5e-4947.75Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1[more]
A0A0A0LAN6_CUCSA2.7e-4846.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1[more]
B5KLI2_PRUAV4.5e-3538.94S7-RNase OS=Prunus avium GN=S-RNase PE=3 SV=1[more]
Q9AVS5_PRUAV5.9e-3538.01RNase S5 OS=Prunus avium GN=S5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT2G02990.13.8e-2532.06 ribonuclease 1[more]
AT1G26820.11.6e-2330.90 ribonuclease 3[more]
AT1G14220.13.5e-2331.90 Ribonuclease T2 family protein[more]
AT1G14210.15.1e-2230.49 Ribonuclease T2 family protein[more]
Match NameE-valueIdentityDescription
gi|700203881|gb|KGN59014.1|1.3e-5450.49hypothetical protein Csa_3G743990 [Cucumis sativus][more]
gi|778683692|ref|XP_011651927.1|3.5e-4947.75PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
gi|700203887|gb|KGN59020.1|3.9e-4846.88hypothetical protein Csa_3G745530 [Cucumis sativus][more]
gi|659085730|ref|XP_008443571.1|2.9e-4345.65PREDICTED: ribonuclease MC-like [Cucumis melo][more]
gi|325979687|gb|ADZ48272.1|7.6e-3637.66S-locus-associated ribonuclease [Prunus speciosa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001568RNase_T2-like
IPR018188RNase_T2_His_AS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0033897ribonuclease T2 activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G005940.1CmoCh14G005940.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3DG3DSA:3.90.730.10coord: 26..228
score: 2.7
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 1..235
score: 1.3
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 28..214
score: 7.8
IPR001568Ribonuclease T2-likeunknownSSF55895Ribonuclease Rh-likecoord: 20..229
score: 1.7
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 55..62
scor

The following gene(s) are paralogous to this gene:

None