Csa3G824980 (gene) Cucumber (Chinese Long) v2

NameCsa3G824980
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32630007 .. 32630275 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCGTCGTTGATTTGTTTTCGAAGGTTACCTAGCGCCGGTGCAGCTTGTTGCCCGGAGAAGAAGAATAAGTGGGAAACGTCGCAGGAGCCGTTCGTGGGTCACTTGCACTTGTAGATCTGCTGCCGCGAGGAACTGAATCCGCCGGAGTAGGAAGAGCCAGGACGGTCCGGCTCTTTGTAATTGAGTTGGGTCGCCTGAGGATCGCCGGAGATGGTGGATTCGCCGTGAGGTCCTTGGAGCTTGAGGAAAGATGGGATGGATAA

mRNA sequence

ATGCCGCCGTCGTTGATTTGTTTTCGAAGGTTACCTAGCGCCGGTGCAGCTTGTTGCCCGGAGAAGAAGAATAAGTGGGAAACGTCGCAGGAGCCGTTCGTGGGAACTGAATCCGCCGGAGTAGGAAGAGCCAGGACGGTCCGGCTCTTTGTAATTGAGTTGGGTCGCCTGAGGATCGCCGGAGATGGTGGATTCGCCGTGAGGTCCTTGGAGCTTGAGGAAAGATGGGATGGATAA

Coding sequence (CDS)

ATGCCGCCGTCGTTGATTTGTTTTCGAAGGTTACCTAGCGCCGGTGCAGCTTGTTGCCCGGAGAAGAAGAATAAGTGGGAAACGTCGCAGGAGCCGTTCGTGGGAACTGAATCCGCCGGAGTAGGAAGAGCCAGGACGGTCCGGCTCTTTGTAATTGAGTTGGGTCGCCTGAGGATCGCCGGAGATGGTGGATTCGCCGTGAGGTCCTTGGAGCTTGAGGAAAGATGGGATGGATAA

Protein sequence

MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIAGDGGFAVRSLELEERWDG*
BLAST of Csa3G824980 vs. TrEMBL
Match: A0A0A0LCR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824980 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.2e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60
          MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA
Sbjct: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60

Query: 61 GDGGFAVRSLELEERWDG 79
          GDGGFAVRSLELEERWDG
Sbjct: 61 GDGGFAVRSLELEERWDG 78

BLAST of Csa3G824980 vs. NCBI nr
Match: gi|700204420|gb|KGN59553.1| (hypothetical protein Csa_3G824980 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1

Query: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60
          MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA
Sbjct: 1  MPPSLICFRRLPSAGAACCPEKKNKWETSQEPFVGTESAGVGRARTVRLFVIELGRLRIA 60

Query: 61 GDGGFAVRSLELEERWDG 79
          GDGGFAVRSLELEERWDG
Sbjct: 61 GDGGFAVRSLELEERWDG 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LCR7_CUCSA9.2e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824980 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700204420|gb|KGN59553.1|1.3e-37100.00hypothetical protein Csa_3G824980 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G824980.1Csa3G824980.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G824980CSPI03G38830Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None