Csa3G806790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G806790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 30871506 .. 30871750 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGTCAGATCGGGAGGCCCATTGCTATTCTTTTGTGGGAAGTGTGGAATAACATGAATCTGTTGATGGTCAAGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCATAG

mRNA sequence

ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCATAG

Coding sequence (CDS)

ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCATAG

Protein sequence

MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS*
Homology
[Close]
BLAST of Csa3G806790 vs. TrEMBL
Match: A0A0A0LBU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806790 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.0e-25
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 58
          MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS
Sbjct: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 57

[Close]
BLAST of Csa3G806790 vs. NCBI nr
Match: gi|700204165|gb|KGN59298.1| (hypothetical protein Csa_3G806790 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 7.2e-25
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 58
          MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS
Sbjct: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 57

The following BLAST results are available for this feature:
BLAST of Csa3G806790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBU2_CUCSA5.0e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806790 PE=4 SV=1[more]
BLAST of Csa3G806790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204165|gb|KGN59298.1|7.2e-25100.00hypothetical protein Csa_3G806790 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G806790.1Csa3G806790.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G806790CSPI03G36440Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G806790Silver-seed gourdcarcuB0172
Csa3G806790Silver-seed gourdcarcuB0276
Csa3G806790Watermelon (97103) v2cuwmbB186
Csa3G806790Wax gourdcuwgoB222
Csa3G806790Cucumber (Chinese Long) v2cucuB134
Csa3G806790Cucumber (Gy14) v1cgycuB344
Csa3G806790Cucurbita maxima (Rimu)cmacuB239
Csa3G806790Cucurbita maxima (Rimu)cmacuB826
Csa3G806790Cucurbita moschata (Rifu)cmocuB226
Csa3G806790Cucurbita moschata (Rifu)cmocuB816
Csa3G806790Melon (DHL92) v3.5.1cumeB223
Csa3G806790Watermelon (Charleston Gray)cuwcgB194
Csa3G806790Watermelon (97103) v1cuwmB198
Csa3G806790Cucurbita pepo (Zucchini)cpecuB597
Csa3G806790Bottle gourd (USVL1VR-Ls)culsiB186
Csa3G806790Cucumber (Gy14) v2cgybcuB110
Csa3G806790Melon (DHL92) v3.6.1cumedB207