CSPI03G36440 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G36440
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 31686445 .. 31686686 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGTCAGATCGGGAGGCCCATTGCTATTCTTTTGTGGGAAGTGTGGAATAACATGAATCTGTTGATGGTCAAGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCA

mRNA sequence

ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCA

Coding sequence (CDS)

ATGGGAGCTCGATGGACTATTGAAAAGGGTCGATGGGGTGCTGAAAGGGGCTCTCCTCTTGACTGTGCTTCTCTAGCGAATTGTGTACGTGCACATTTGGAGGAGTTTATGAGTGTTCATGCTGTGGTGGTTCCAGACTTTGGGAGGGAACTACAGGAAAGTGTGGTTTCA
Homology
[Close]
BLAST of CSPI03G36440 vs. TrEMBL
Match: A0A0A0LBU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806790 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-25
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 58
          MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS
Sbjct: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 57

[Close]
BLAST of CSPI03G36440 vs. NCBI nr
Match: gi|700204165|gb|KGN59298.1| (hypothetical protein Csa_3G806790 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 4.1e-25
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

Query: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 58
          MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS
Sbjct: 1  MGARWTIEKGRWGAERGSPLDCASLANCVRAHLEEFMSVHAVVVPDFGRELQESVVS 57

The following BLAST results are available for this feature:
BLAST of CSPI03G36440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G36440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBU2_CUCSA2.9e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806790 PE=4 SV=1[more]
BLAST of CSPI03G36440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G36440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204165|gb|KGN59298.1|4.1e-25100.00hypothetical protein Csa_3G806790 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G36440.1CSPI03G36440.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G36440Csa3G806790Cucumber (Chinese Long) v2cpicuB120
CSPI03G36440CsaV3_3G038790Cucumber (Chinese Long) v3cpicucB145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G36440Melon (DHL92) v3.6.1cpimedB208
CSPI03G36440Cucumber (Gy14) v2cgybcpiB111
CSPI03G36440Silver-seed gourdcarcpiB0178
CSPI03G36440Silver-seed gourdcarcpiB0280
CSPI03G36440Watermelon (97103) v2cpiwmbB189
CSPI03G36440Wax gourdcpiwgoB222
CSPI03G36440Wax gourdcpiwgoB223
CSPI03G36440Wild cucumber (PI 183967)cpicpiB148
CSPI03G36440Cucumber (Gy14) v1cgycpiB360
CSPI03G36440Cucurbita maxima (Rimu)cmacpiB241
CSPI03G36440Cucurbita maxima (Rimu)cmacpiB839
CSPI03G36440Cucurbita moschata (Rifu)cmocpiB229
CSPI03G36440Cucurbita moschata (Rifu)cmocpiB824
CSPI03G36440Cucumber (Chinese Long) v2cpicuB168
CSPI03G36440Melon (DHL92) v3.5.1cpimeB188
CSPI03G36440Melon (DHL92) v3.5.1cpimeB214
CSPI03G36440Watermelon (Charleston Gray)cpiwcgB195
CSPI03G36440Watermelon (97103) v1cpiwmB198
CSPI03G36440Cucurbita pepo (Zucchini)cpecpiB599
CSPI03G36440Bottle gourd (USVL1VR-Ls)cpilsiB184