Csa3G784360 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G784360
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Gb\|AAF02136.1
Location	Chr3 : 30476588 .. 30478034 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATCTTCTTTCTCCAACAAAAGATTAGGTTCATATTTGATTGTAAGAATGGAAATGCATCTCTGTAAACTCTCCCAAATTTCTCTCAAACAGAAAATTTCTTTATCTCTTTCTTCTCCAATCTTCCCCATTTATAGGATCTCACCTCCATTTCCTACCACACCCCATTAATTTCTCCCTCAATTCCTTCACAAACCCTCCATTCTTCAGCCTCCATCGCCGCCTTCTTCGCCTTCTCCCCCTCCCTTATCCCTCCCCCCATCCGGACCCCGATTTGCTGTTTCCCAGCAACTCTACTCCGCCGCCGTGATCGCCTCCTCCAATGGCTGCTCCTGCCTTGCTCGCTTTCTCTTAGCCTCCACACATATTTGTGGGAGGAGGAACTCGCGCTTCCATTTCATTCATTTTGATTTTGTTCTTGTTTTGTTCTCTGGTTGATTCCTTCTCCCACAGGAAATCGTTTGAAGATTTGATTTGATTCGAATCGGTTTTGATTGTTTTTTTAGGGTTTTTTTTTTATATATATTTTTTATGGAGGAAGTATAGAGAAAGGAGTAAGGGATTAGAGATTTTGAAATTAAAATCTCTCAACTAATTATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGAAAAAATTCTTCTTCTTCTTCATTTCTCTCAATCTGAACCTTCACTGCAAATTTTCCCGGAAAAACAGAAGGAAAAGGAAAGGAAAACTTTGTTGGATCTGTGGTTTGATGATTTGGAAATGGTGGTGGTGGTGGCGGACGGGGTTTTTCATTTCTTGATTGTTTTTGGAATTTTAATTTATTTATTGTGAGCATTCAAGTTCTTCATTTGTTTATTTTGTTGTTGAATTCATGATGTTTGGGTTCCGGGAAAATATTGTACTTTCTCTCATTTTCACCTGGAAATAAAAAATACAAAACAAATAAAAGTGAAAAAGATAAGATTTGGATTTCTTTCATTCCAAAAGTTTTTATTTTTTAATTGTTTAAA

mRNA sequence

ATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGA

Coding sequence (CDS)

ATGTCGAATACGATTATGTTTCGTCCGCCATCGTCGAACCGTCGACAACCATTGTTAACGAGCAAATCTGCTTCCGGAAGTGTTCGGTTCGCGGAGGTAGCTGGCGGAACGACGGCGGAGTGTGCTGCTGTGTGTTGTTGTTGTCCTTGTGTTGTTATAAACTTTCTTGTTCTCGCCATTTACAAGGTTCCGGCTGGACTTTGCCGTCGTGCGTTGAGGACGAAGCGACGGCAGAGGTTGAAGAAAAAGGGAGTTACTCCGGCGAGGCGTGGACGGTTCTCTTTTGGGGGGTATGATGAGACGGATATTCAGATACTTTCGGCGGGAAAATTAGTGTACTCGTCGGAGCCAAGAGGGCAGCAAGCGGTGGAAACAGAGAGGAAAGTGATGGAACTGGAAAAAGAGATGTGGGAGATTTTTTATAGTACTGGGTTTTGGAGAAGCCCTTCACGGAGAGATCAAACTTCGATCTCTCAATGA

Protein sequence

MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ*

Homology

[Close]

BLAST of Csa3G784360 vs. TrEMBL
Match: A0A0A0LGV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G784360 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ
Sbjct: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 159

[Close]

BLAST of Csa3G784360 vs. TrEMBL
Match: A0A067FTL7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040225mg PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-38
Identity = 87/172 (50.58%), Postives = 111/172 (64.53%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVR--------------FAEVAGGTTAECAAVCC 60
           MS  I+ R P+ N+RQPLL S S S S                FAEVAGGTTAECAAVCC
Sbjct: 1   MSRQIVLRSPTVNKRQPLLLSSSGSSSSNGSKSTRSGGGSGSSFAEVAGGTTAECAAVCC 60

Query: 61  CCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQIL 120
           CCPC ++N LV+AIYK+PAGLCR+A + KR+Q+L KKG+ P R+      G D+ ++QI 
Sbjct: 61  CCPCGLVNLLVMAIYKLPAGLCRKAWKEKRKQQLIKKGLLPKRKRSKCKCGCDDLEMQIH 120

Query: 121 SAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
               L      R   + E+ER+V+ELEKEMWE FYS GFWR+ S+R + + S
Sbjct: 121 PVVDLQNCLTDRAMNSDESERRVVELEKEMWERFYSAGFWRTASQRQRETTS 172

[Close]

BLAST of Csa3G784360 vs. TrEMBL
Match: V4SRC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012921mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-37
Identity = 86/174 (49.43%), Postives = 111/174 (63.79%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVR----------------FAEVAGGTTAECAAV 60
           MS  I+ R P+ N+RQPLL S S S +                  FAEVAGGTTAECAAV
Sbjct: 1   MSRQIVLRSPTVNKRQPLLLSSSGSSTSSSNGSKSTRSGGGSGSSFAEVAGGTTAECAAV 60

Query: 61  CCCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQ 120
           CCCCPC ++N LV+AIYK+PAGLCR+A + KR+Q+L KKG+ P R+      G D+ ++Q
Sbjct: 61  CCCCPCGLVNLLVMAIYKLPAGLCRKAWKEKRKQQLIKKGLLPKRKRSKCKCGCDDLEMQ 120

Query: 121 ILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
           I     L      R   + E+ER+V+ELEKEMWE FYS GFWR+ S+R + + S
Sbjct: 121 IHPVVDLQNCLTDRAMNSDESERRVVELEKEMWERFYSAGFWRTASQRQRETTS 174

[Close]

BLAST of Csa3G784360 vs. TrEMBL
Match: A0A059A499_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01912 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-37
Identity = 91/175 (52.00%), Postives = 114/175 (65.14%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLL-----TSKSAS----------GSVRFAEVAGGTTAECAAVC 60
           M   I+ RPPS +RR+PLL     TS SAS          GSVRFAEVAGGT AECA VC
Sbjct: 1   MPRQIVLRPPSVSRREPLLRASKSTSSSASASSGSSAGGRGSVRFAEVAGGTAAECAVVC 60

Query: 61  CCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQI 120
           CCCPC ++N ++LA+YKVPAGLCRRA R  RR+RL KKG+  + +GR    G +E ++QI
Sbjct: 61  CCCPCGIVNLILLAVYKVPAGLCRRAWRKTRRKRLIKKGLL-SPKGRRLTCGCEEKELQI 120

Query: 121 LSAGKLVYSSEPRGQQA----VETERKVMELEKEMWEIFYSTGFWRSPSRRDQTS 157
                   + E +   A     E +++V +LEKEMWE FYSTGFWRSPS+R+  S
Sbjct: 121 HPFAANEAAPEMKTPAAAAADAEVDKQVAKLEKEMWERFYSTGFWRSPSQREPAS 174

[Close]

BLAST of Csa3G784360 vs. TrEMBL
Match: A0A067KUW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08719 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.6e-36
Identity = 86/155 (55.48%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 10  PSSNRRQPLLTSKSASGSV------RFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKV 69
           P SN R+PLL  KS S S       RFAE AGGTTAECAAVCCCCPC + N L L IYKV
Sbjct: 76  PGSNNRRPLLRRKSHSISSNPYYGDRFAEFAGGTTAECAAVCCCCPCGLANLLYLTIYKV 135

Query: 70  PAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKL-----VYSSEPR 129
           PAGLCRRALR KRR++L KKG+ PAR  R  + G D+T++QI  A        +  S+  
Sbjct: 136 PAGLCRRALRKKRRKQLIKKGLLPARVKR-CYCGCDDTELQIHPANGFHDSLHILKSDDD 195

Query: 130 GQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRD 154
                E E  +M+LE+EMWE FY TGFWRSPS+++
Sbjct: 196 ESSDEEEEEAMMKLEQEMWETFYGTGFWRSPSQKE 229

[Close]

BLAST of Csa3G784360 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein)

HSP 1 Score: 134.4 bits (337), Expect = 6.1e-32
Identity = 77/186 (41.40%), Postives = 97/186 (52.15%), Query Frame = 1


Query: 2   SNTIMFRPPSSNRRQPLLTSKSASGSVRF-------AEVAGGTTAECAAVCCCCPCVVIN 61
           S+T    P  SNRRQPLL    +S S R        AE  GGTTA CAAV CCCPC ++N
Sbjct: 19  SDTPSSSPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVN 78

Query: 62  FLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPA--------------RRGRFSFGGYDE 121
            LVLAIYKVP G+CRRA+R++RR++L K G+ P               +   F+    D 
Sbjct: 79  LLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDS 138

Query: 122 TDI----------QILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPS 157
            D+           +   GK V +     ++  E +  V+ LEKEMW  FY  GFWRSPS
Sbjct: 139 DDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPS 198

[Close]

BLAST of Csa3G784360 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.8e-26
Identity = 63/142 (44.37%), Postives = 78/142 (54.93%), Query Frame = 1


Query: 15  RQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRT 74
           R+ L T     G    AE  GGTTA CAA+C C PC V+N +VLA+YK+P GLCRRA+R 
Sbjct: 8   RRSLSTPSLCGGGSTTAECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRR 67

Query: 75  KRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEK 134
            RR+RL KK    + R  F  GG  +  +  L        S    ++  E +  V+ LEK
Sbjct: 68  IRRKRLAKKEFVESGR-EFGRGGSSQFAVHPL-------ESRDEEEEEEEEDEAVIALEK 127

Query: 135 EMWEIFYSTGFWRSPSRRDQTS 157
           EMW  FYS GFWRS S+ +  S
Sbjct: 128 EMWSRFYSGGFWRSLSQAETAS 141

[Close]

BLAST of Csa3G784360 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.7e-22
Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 1


Query: 11  SSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRR 70
           S+ R  P  T+  +    +  EVAGG  AECAAV CCCPC V+N +VLA+YKVPA +C++
Sbjct: 18  STMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPAAVCKK 77

Query: 71  ALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQI--------LSAGKLVYSSEPRGQQA 130
           A R  +R+R  +K     R G  +    + ++  +        L+A  +       G + 
Sbjct: 78  AWRRSKRRRFTRK-----RHGLLASATAEGSESTVHARLNEEDLTAEIVFEECHVSGGEL 137

Query: 131 VETERKVMELEKEMWEIFYSTGFWRSPSRRDQTS 157
                 V+ LE EM + FY  GFWRSPS++D +S
Sbjct: 138 ----NDVVRLENEMLDRFYGAGFWRSPSQKDTSS 162

[Close]

BLAST of Csa3G784360 vs. TAIR10
Match: AT5G14690.1 (AT5G14690.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 8.9e-07
Identity = 30/74 (40.54%), Postives = 37/74 (50.00%), Query Frame = 1


Query: 27  SVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVT 86
           S R    A    A+C A+CCC PC +IN L L + KVP  + RR L    R + KK+ V 
Sbjct: 45  SKRCRSWAAAAIADCVALCCC-PCAIINLLTLTLVKVPWMIGRRCLGGGGRNK-KKRRVI 104

Query: 87  PARRGRFSFGGYDE 101
             R+ R +  G DE
Sbjct: 105 HRRKRRGNINGEDE 116

[Close]

BLAST of Csa3G784360 vs. NCBI nr
Match: gi|778684568|ref|XP_011652052.1| (PREDICTED: uncharacterized protein LOC105434984 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.6e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ
Sbjct: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 160
           QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ
Sbjct: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSISQ 159

[Close]

BLAST of Csa3G784360 vs. NCBI nr
Match: gi|225439354|ref|XP_002270752.1| (PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera])

HSP 1 Score: 178.7 bits (452), Expect = 8.0e-42
Identity = 91/153 (59.48%), Postives = 117/153 (76.47%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAI 60
           M+  I+ RPPS NRRQPLL S+S+SGS+RFAEVAG TTAECAAV CCCPC ++N LVLA+
Sbjct: 1   MTRQIVMRPPSLNRRQPLLASQSSSGSIRFAEVAGETTAECAAVACCCPCGLVNLLVLAV 60

Query: 61  YKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQ 120
           YKVPAGLCRRAL+ KR +R+ KKG+   RR R    G D+T++QI      V  ++    
Sbjct: 61  YKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPC-GCDDTELQIHPISGDVTDAD-ISV 120

Query: 121 QAVETERKVMELEKEMWEIFYSTGFWRSPSRRD 154
           ++ E+E++VM+LEKEMW+ FYSTGFWRS S+R+
Sbjct: 121 KSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151

[Close]

BLAST of Csa3G784360 vs. NCBI nr
Match: gi|1009179871|ref|XP_015871319.1| (PREDICTED: uncharacterized protein LOC107408439 [Ziziphus jujuba])

HSP 1 Score: 172.2 bits (435), Expect = 7.5e-40
Identity = 94/161 (58.39%), Postives = 115/161 (71.43%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLT--SKSASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVL 60
           MS  I+ R  SSNRRQPLL   S+ +S + RFAEVAGGTTA CAA+CCCCPC ++N LVL
Sbjct: 1   MSKPIILRSQSSNRRQPLLNNNSRGSSRNSRFAEVAGGTTASCAALCCCCPCGLVNLLVL 60

Query: 61  AIYKVPAGLCRRALRTKRR-QRLKKKGVTPARRGRFSFGGYDETDIQI--LSAGKLVYSS 120
           AIYK+PAGLCRRAL+ KR    +K  GV P R  R S+  YDE ++QI  LS   L    
Sbjct: 61  AIYKLPAGLCRRALKKKRHDSMIKNGGVLPPRCRRCSY-SYDEAELQIHPLSMDVLKNVK 120

Query: 121 EPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTS 157
            P  ++A   E++VMELEKEMWE FYSTGFWRSPS+R+ ++
Sbjct: 121 SPEWEEA---EKQVMELEKEMWERFYSTGFWRSPSQREPSA 157

[Close]

BLAST of Csa3G784360 vs. NCBI nr
Match: gi|568856125|ref|XP_006481639.1| (PREDICTED: uncharacterized protein LOC102612483 [Citrus sinensis])

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 88/172 (51.16%), Postives = 111/172 (64.53%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVR--------------FAEVAGGTTAECAAVCC 60
           MS  I+ R P+ N+RQPLL S S S S                FAEVAGGTTAECAAVCC
Sbjct: 1   MSRQIVLRSPTVNKRQPLLLSSSGSSSSNGSKSTRSGGGSGSSFAEVAGGTTAECAAVCC 60

Query: 61  CCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQIL 120
           CCPC ++N LV+AIYK+PAGLCR+A + KR+Q+L KKG+ P R+      G DE ++QI 
Sbjct: 61  CCPCGLVNLLVMAIYKLPAGLCRKAWKEKRKQQLIKKGLLPKRKRSKCKYGCDELEMQIH 120

Query: 121 SAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
               L      R   + E+ER+V+ELEKEMWE FYS GFWR+ S+R + + S
Sbjct: 121 PVVDLQNCLTDRAMNSDESERRVVELEKEMWERFYSAGFWRTASQRQRETTS 172

[Close]

BLAST of Csa3G784360 vs. NCBI nr
Match: gi|641851824|gb|KDO70694.1| (hypothetical protein CISIN_1g040225mg [Citrus sinensis])

HSP 1 Score: 166.8 bits (421), Expect = 3.1e-38
Identity = 87/172 (50.58%), Postives = 111/172 (64.53%), Query Frame = 1


Query: 1   MSNTIMFRPPSSNRRQPLLTSKSASGSVR--------------FAEVAGGTTAECAAVCC 60
           MS  I+ R P+ N+RQPLL S S S S                FAEVAGGTTAECAAVCC
Sbjct: 1   MSRQIVLRSPTVNKRQPLLLSSSGSSSSNGSKSTRSGGGSGSSFAEVAGGTTAECAAVCC 60

Query: 61  CCPCVVINFLVLAIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQIL 120
           CCPC ++N LV+AIYK+PAGLCR+A + KR+Q+L KKG+ P R+      G D+ ++QI 
Sbjct: 61  CCPCGLVNLLVMAIYKLPAGLCRKAWKEKRKQQLIKKGLLPKRKRSKCKCGCDDLEMQIH 120

Query: 121 SAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQTSIS 159
               L      R   + E+ER+V+ELEKEMWE FYS GFWR+ S+R + + S
Sbjct: 121 PVVDLQNCLTDRAMNSDESERRVVELEKEMWERFYSAGFWRTASQRQRETTS 172

The following BLAST results are available for this feature:

BLAST of Csa3G784360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGV0_CUCSA	1.8e-85	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G784360 PE=4 SV=1	[more]
A0A067FTL7_CITSI	2.2e-38	50.58	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040225mg PE=4 SV=1	[more]
V4SRC8_9ROSI	1.1e-37	49.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012921mg PE=4 SV=1	[more]
A0A059A499_EUCGR	3.2e-37	52.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01912 PE=4 SV=1	[more]
A0A067KUW9_JATCU	4.6e-36	55.48	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08719 PE=4 SV=1	[more]

BLAST of Csa3G784360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11690.1	6.1e-32	41.40	unknown protein	[more]
AT5G06380.1	3.8e-26	44.37	unknown protein	[more]
AT2G27180.1	5.7e-22	37.01	unknown protein	[more]
AT5G14690.1	8.9e-07	40.54	unknown protein	[more]

BLAST of Csa3G784360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778684568\|ref\|XP_011652052.1\|	2.6e-85	100.00	PREDICTED: uncharacterized protein LOC105434984 [Cucumis sativus]	[more]
gi\|225439354\|ref\|XP_002270752.1\|	8.0e-42	59.48	PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]	[more]
gi\|1009179871\|ref\|XP_015871319.1\|	7.5e-40	58.39	PREDICTED: uncharacterized protein LOC107408439 [Ziziphus jujuba]	[more]
gi\|568856125\|ref\|XP_006481639.1\|	1.4e-38	51.16	PREDICTED: uncharacterized protein LOC102612483 [Citrus sinensis]	[more]
gi\|641851824\|gb\|KDO70694.1\|	3.1e-38	50.58	hypothetical protein CISIN_1g040225mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU088840	cucumber EST collection version 3.0	transcribed_cluster
CU102269	cucumber EST collection version 3.0	transcribed_cluster
CU108369	cucumber EST collection version 3.0	transcribed_cluster
CU111600	cucumber EST collection version 3.0	transcribed_cluster
CU134745	cucumber EST collection version 3.0	transcribed_cluster
CU151415	cucumber EST collection version 3.0	transcribed_cluster
CU162098	cucumber EST collection version 3.0	transcribed_cluster
CU164350	cucumber EST collection version 3.0	transcribed_cluster
CU165593	cucumber EST collection version 3.0	transcribed_cluster
CU168465	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G784360.1	Csa3G784360.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU108369	CU108369	transcribed_cluster
CU165593	CU165593	transcribed_cluster
CU088840	CU088840	transcribed_cluster
CU168465	CU168465	transcribed_cluster
CU134745	CU134745	transcribed_cluster
CU162098	CU162098	transcribed_cluster
CU151415	CU151415	transcribed_cluster
CU102269	CU102269	transcribed_cluster
CU164350	CU164350	transcribed_cluster
CU111600	CU111600	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264	FAMILY NOT NAMED	coord: 29..153 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G784360	Cla017595	Watermelon (97103) v1	cuwmB198
Csa3G784360	MELO3C009569	Melon (DHL92) v3.5.1	cumeB223
Csa3G784360	ClCG10G018030	Watermelon (Charleston Gray)	cuwcgB194
Csa3G784360	Lsi03G017900	Bottle gourd (USVL1VR-Ls)	culsiB186
Csa3G784360	MELO3C009569.2	Melon (DHL92) v3.6.1	cumedB207
Csa3G784360	Cla97C10G200980	Watermelon (97103) v2	cuwmbB186
Csa3G784360	Bhi11G002058	Wax gourd	cuwgoB222
Csa3G784360	CSPI03G35920	Wild cucumber (PI 183967)	cpicuB120
Csa3G784360	Cucsa.242170	Cucumber (Gy14) v1	cgycuB344
Csa3G784360	CmaCh14G003790	Cucurbita maxima (Rimu)	cmacuB239
Csa3G784360	CmaCh06G005460	Cucurbita maxima (Rimu)	cmacuB816
Csa3G784360	CmoCh06G005490	Cucurbita moschata (Rifu)	cmocuB808
Csa3G784360	CmoCh14G003790	Cucurbita moschata (Rifu)	cmocuB226
Csa3G784360	Cp4.1LG03g00170	Cucurbita pepo (Zucchini)	cpecuB597
Csa3G784360	Cp4.1LG08g09440	Cucurbita pepo (Zucchini)	cpecuB861
Csa3G784360	Carg16238	Silver-seed gourd	carcuB0700
Csa3G784360	Carg03605	Silver-seed gourd	carcuB0276

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G784360	Cucumber (Gy14) v2	cgybcuB110