Csa3G644770 (gene) Cucumber (Chinese Long) v2

NameCsa3G644770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 25244930 .. 25245157 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

mRNA sequence

ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

Coding sequence (CDS)

ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

Protein sequence

MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQPSPTLVRVSDNVLLRL*
BLAST of Csa3G644770 vs. TrEMBL
Match: A0A0A0L9C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G644770 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60
          MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP
Sbjct: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60

Query: 61 SPTLVRVSDNVLLRL 76
          SPTLVRVSDNVLLRL
Sbjct: 61 SPTLVRVSDNVLLRL 75

BLAST of Csa3G644770 vs. NCBI nr
Match: gi|700203305|gb|KGN58438.1| (hypothetical protein Csa_3G644770 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60
          MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP
Sbjct: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60

Query: 61 SPTLVRVSDNVLLRL 76
          SPTLVRVSDNVLLRL
Sbjct: 61 SPTLVRVSDNVLLRL 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L9C3_CUCSA2.7e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G644770 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700203305|gb|KGN58438.1|3.8e-34100.00hypothetical protein Csa_3G644770 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G644770.1Csa3G644770.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None